Basic Information

Gene Symbol
Smarcc2
Assembly
GCA_036924255.1
Location
JAUPFN010000021.1:23963412-23972556[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.4e-15 5.8e-12 46.9 0.1 3 44 55 96 53 98 0.95

Sequence Information

Coding Sequence
ATGAACGGAAGGCCGCCGGCCGACTTCCTGCTAGTGCGTATTCGATTCGGCCTTGAGATCACGGACTGTCCGGCCGATACTTGTCGACGCAGGTCTGTAACGGCAAGCGGCCACATACATTGGTACCGCGGCGTGGGCGGTGCGGGCGGGCTGCGCGGGCGCGCGTGGACGGAGCAGGAGACGCTGCTGCTGCTGGAGGCGCTGGAGCTGCACCGCGACGACTGGAACCGCGTGGCCGCGCACGTGGGCAGCCGCACGCACGACGAGTGCATCCTGCACTTCCTACGCCTGCCTATTGAGGACCCCTACCTTAACGACGCTGGAGTTTTGGGTCCACTGGCGTATCAACCAATTCCGTTCAGTAAACAAGGCAACCCAGTGATGAGCACGGTGGCCTTCCTCGCTTCCGTGGTTGATCCGCGTATTGCCTCCAAGGCGACCAAGGCTGCTATGGATGAATTTGCTGCTATTAAGGACGAGGTGCCGGCGGCCATGATGGAGGCGCACGTGCGGGCGGCGGGCGCGCACGGGCCGGCCGCGGCGCTGGCCGCCACCGGCATCGCCGGCACCGCGCCGCCCCCGCACCCGCACCCCGCCACACATCCCGGTCAGTCATACATGATACACCGCGTGGTGCGCACGTGCGAGCGGCGGGCGCGCACGGGCCGGCCGCGGCGCTGGCCGCCACCGGCATCGCCGGCACCGCGCCGCCCCCGCACCCGCACCCCGCCACACATCCCGGTCAGTCATACATGA
Protein Sequence
MNGRPPADFLLVRIRFGLEITDCPADTCRRRSVTASGHIHWYRGVGGAGGLRGRAWTEQETLLLLEALELHRDDWNRVAAHVGSRTHDECILHFLRLPIEDPYLNDAGVLGPLAYQPIPFSKQGNPVMSTVAFLASVVDPRIASKATKAAMDEFAAIKDEVPAAMMEAHVRAAGAHGPAAALAATGIAGTAPPPHPHPATHPGQSYMIHRVVRTCERRARTGRPRRWPPPASPAPRRPRTRTPPHIPVSHT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-