Basic Information

Insect: Apodemia mormo
Gene Symbol: clz9
Assembly: GCA_036924255.1
Location: JAUPFN010000008.1:9621341-9623425[+]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.6e-07 0.00015 22.8 0.1 4 37 20 53 17 59 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.6e-07	0.00015	22.8	0.1	4	37	20	53	17	59	0.91

Sequence Information

Coding Sequence: ATGCCGCGAATATATAAGAAAAAGGAATTTTCGAGGACGGGGCATATAGATGAGGTAGCGATGGAGTCTGCTATAAAAGAAGTCGTAGAAAAAACTTTATCCATAAGAAAATCGGCAGCCAAATACGGCATAAAGCCTTCTACATTAGAATCACGACTtgcaaagataaaaaaaatggctACTGCTGAAGCTCCTTTACGATGTTTTGGATCCAAATATACATCTAAACAGGTATTCACTACAGCGGAAGAAACacttctaaataaatatattgcagaaTGTTCTCGTATGAATTATGGGCTTACACTTGTACAACTTCGGAGATTGGCGTATGAGTTtgcaaaaataaatcatttacaATTTCCCTCTAGTTGGCATCATAATGGGATGGCTGGTTTAGATTGGGCAAAAAGTTATCGCTACCGTAACGCCAACTTAAGCTTAAGAAAACCGGAGAATACAAGCGCTGCCCGTGCCTATGGTTTCAATAAGACTGCAGTCAAtgacttttttaataatttagaagCTGTACTTACGAGATATAATTTTACTTGTGACAGGATTCATAATTTTGACGAGTCAGGAATTTCTACCGTGATGAGTACTCCGAAAGTATtagctgaaaaatgtcgaaagCAGGTCGGCCAATTAGTCTCAGGAGAACGAGGTGAACTCGTTACTTTTGGCGGTATAATATCGGCCAGCGGTAACACTATTCCGCCACTTTTTATTTTCCCAAGGGTGCATTTTAAGGACCATTTTATGGCAGGTGCTCCTGAAGGTAGCTTGGGTGTTGCTACAAGGAGTGGGTGGATAAACTCGGAAATATTTATAGATGTGCTTAAACATATTCAACAGAAAACATCGTGCTCAAAAGAAAACCCTATTCTATTATTGGTCGATAATCATGAGAGTCACGCCACGGTAGAAGCTATAGACTATGCCCGTGACAACGGCATTGTTTATATCTCTTTTCCTCCTCATACAACGCACCGACTCCAGCCATTAGACGTGGGCGTATTTGGCCCTTTTAAGGCCAAATTAAAAGTAGCGTTTAACGACTGGCATGTATCAAACCCAGGAAAAACTTTGAGCATTTACCAAATCccaaaattagctaaaataGCCTACTTTGAGTCGTTCACCAACAAAAATATTACGAGTGCTTTTGAAAAAACAGGCATATGGCCATACAATAAACTTATATTTAGTGACGAAGATTTTGCTCCTGTTAAAGCTTACCAATCCAACTCTTCAgctaatacaaatattaatatacaacaGCAGGAAGCCGTTATCGAAGAAAATGTAATTATTGAACAATCAATTCCTATAAATTCTCGGCCCTCGTCACCATCCCTGCTGCACCAATCAATGCACTTTGATCCACAATCATCACCTGCTCCTGGACTAATAACACCAGAGGTAGTCCGGCCCTATCCTAAAGTAAACAAGGATCAAAATACAAAGCCGAAGAAAGGAAAAACACCGGGGAAGTCAAGAATTTATACAGATACACCAGAAAAACAAAGACTTTTAGAAATACAAAAAgcaaagataattaaaaaacaagagCAAGAAAGAAAAAGTAGAGCTAAAGAAATAAAGCGTGCACTAAAGTTGATATCCCAGACTGATAAAATAGCTAACCCGAAGAGACAAAAGAAAGATGCACAGTTGGAGACTGATAGTGAAGATGAAACTGATATAAGTTTCATAGAAAGCTCTTCTTCACCTTTATCGACCGAAGGATCTAATTTCGAAGAAGAAATCAATAAGGAAGAACCAGTATTGAGCCACAACATTAATGAAGAAACTTTTGTGCTAGTAAAATTTGAGAAGAAGTCAACTGTTCTTCATTATGTcggaaaagttttaaaaaaatggcctATGGAATATCACGTCTCTTTTTTAAGAAAGAAACCAGGTTCTTGGAAGTTTGTTTTTCCAAATGTGAAAGACGAAGGAACAGTCTATTTGTCGGATATCGTTGCAGTTTTACCTGCACCTAAATCAGCAAGCACTGCGAGAACTGCAAACATATTCTGTTTTGAACGAAACTTTATTGGATACAATGTTCAgtag
Protein Sequence: MPRIYKKKEFSRTGHIDEVAMESAIKEVVEKTLSIRKSAAKYGIKPSTLESRLAKIKKMATAEAPLRCFGSKYTSKQVFTTAEETLLNKYIAECSRMNYGLTLVQLRRLAYEFAKINHLQFPSSWHHNGMAGLDWAKSYRYRNANLSLRKPENTSAARAYGFNKTAVNDFFNNLEAVLTRYNFTCDRIHNFDESGISTVMSTPKVLAEKCRKQVGQLVSGERGELVTFGGIISASGNTIPPLFIFPRVHFKDHFMAGAPEGSLGVATRSGWINSEIFIDVLKHIQQKTSCSKENPILLLVDNHESHATVEAIDYARDNGIVYISFPPHTTHRLQPLDVGVFGPFKAKLKVAFNDWHVSNPGKTLSIYQIPKLAKIAYFESFTNKNITSAFEKTGIWPYNKLIFSDEDFAPVKAYQSNSSANTNINIQQQEAVIEENVIIEQSIPINSRPSSPSLLHQSMHFDPQSSPAPGLITPEVVRPYPKVNKDQNTKPKKGKTPGKSRIYTDTPEKQRLLEIQKAKIIKKQEQERKSRAKEIKRALKLISQTDKIANPKRQKKDAQLETDSEDETDISFIESSSSPLSTEGSNFEEEINKEEPVLSHNINEETFVLVKFEKKSTVLHYVGKVLKKWPMEYHVSFLRKKPGSWKFVFPNVKDEGTVYLSDIVAVLPAPKSASTARTANIFCFERNFIGYNVQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01016612;
90% Identity: iTF_00144521;
80% Identity: -