Amor037469.1
Basic Information
- Insect
- Apodemia mormo
- Gene Symbol
- -
- Assembly
- GCA_036924255.1
- Location
- JAUPFN010000031.1:6454051-6463164[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-08 7.2e-05 23.8 0.0 3 36 158 190 156 197 0.88 2 2 9.8 9.3e+03 -2.2 0.0 9 21 400 412 400 412 0.89
Sequence Information
- Coding Sequence
- ATGAGTGCTCAAGAATCAAATATCTCGGGTTATTTAGAACGATGTAAATGTTGTTTGGGTGATAGTGGGTTACAGAAAATGTGGGGAAGTAATGATACTAGTGGAGAAAAAGAGGTGTTTGGGGAATTATTTATGGAATGTTTTGCTTTAAGTtGGGAAGCTGTAGATACTGaagtgatttgtgaaaattgTGTTATGAGATTGAGAGATGCAGTGAGATTCAAGAAGGATTTCTTGACTGTACAAGAGATTTTGCAAGGTGTGCATAAAGGTGAGATAATAATAACAATCAAAGATGGTGATGACTTAACAGTATTATCAGATAAAGATGAAAGCATAAATGAATCCAATTCAGTTGAATACTTGGAGAGCAAAGATCAAGAAGaaaagcaCCCTGAAGAGGATATACCCGATGTagcaataaagaaaaaaagtgTCAAAAGAAAGAGGCAAACCATTCAATACACACTAGATGAGTTAGAAAACGCGAAAAGGGCTGTGAAACAGGGTATGTCGATTATGGGAGCAGCCGAGAAGTATGGCATTCCGAGGAAAACACTTTCAATGAAATTGAGCAGTTCTAATGAGAGAGACAAGGATAAATGTGCGAACCAagagaaatttattaaattcatgaAAGAAATACGAGCAGTTCTAACTCATACTAACGCGACTCCGTTCAAATCGAAAACTATTTCCAAAACAAGTGTCAGATATTATTGTGCTTATTGTTCAAATGATGAAAAGTTTTTTGAAGATGCAGACATTTTGAGATCACATACAAAGAATTTTCATAAACATGAACGCATTCGGAGCGTGGAATTATTTATGCGTCCGCTTTGGTACAATGAGATTTTAAAACTAGATGTGATGGATTTGCGATGTAGTACTTGTTCTTTATCAATCTCGGATTGGAACGGTATGTTCTTACATTTCGCAGAGATTCATAATTTGGAATTCGATGAAGCTTACAGAAGGATCATCCCTTATTGTCTTGGAAAAGATTTGAAATGTGTATTGTGCTCGGAAGGTTTTTCGTGTTTCCAGCAAGTGGACGGCCATATGAACCAACATTACTGTAATTATATTTGCTATACATGTGGAGATCCATTTTGCACTTCATTAAGATTAGATATTCATATGAAAATACACAAAGATGTTGGATATCCTTGTTCTTTTTGCGAGAGGACTTTTAAATTAGAAGCATATAGATCGAAACATATAAGTCTCTCTCATAAATCTGATACTGACGTCAAATGTTCTTATTGTCCAGAAGTTTTTGGAGATAGTTACAAAAGGCATAAACATATTTCTGAATTACATCCGGAAAAAATTGAGATTTTGTCTTGCGAATATTGCGGGAAGACATTTAATTGGAAGCCATTTTTGATTAGCCACAAAAGGCGGGAACATGCGAATGAGAAACGTTATGAATGTGACATTTGTGGTAAGAAGTTCACGATGAAGTACCAATTGAGGAATCATATGTTACTTCACGCTGATAAAAAGAAGTATCTTTGCGGTATTTGTGGGAAAGCTTTTAATCTGTTACGGTACTTGAAGGGTCATCGGAAGCAACATGTTTAA
- Protein Sequence
- MSAQESNISGYLERCKCCLGDSGLQKMWGSNDTSGEKEVFGELFMECFALSWEAVDTEVICENCVMRLRDAVRFKKDFLTVQEILQGVHKGEIIITIKDGDDLTVLSDKDESINESNSVEYLESKDQEEKHPEEDIPDVAIKKKSVKRKRQTIQYTLDELENAKRAVKQGMSIMGAAEKYGIPRKTLSMKLSSSNERDKDKCANQEKFIKFMKEIRAVLTHTNATPFKSKTISKTSVRYYCAYCSNDEKFFEDADILRSHTKNFHKHERIRSVELFMRPLWYNEILKLDVMDLRCSTCSLSISDWNGMFLHFAEIHNLEFDEAYRRIIPYCLGKDLKCVLCSEGFSCFQQVDGHMNQHYCNYICYTCGDPFCTSLRLDIHMKIHKDVGYPCSFCERTFKLEAYRSKHISLSHKSDTDVKCSYCPEVFGDSYKRHKHISELHPEKIEILSCEYCGKTFNWKPFLISHKRREHANEKRYECDICGKKFTMKYQLRNHMLLHADKKKYLCGICGKAFNLLRYLKGHRKQHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00145101;
- 90% Identity
- iTF_00145101;
- 80% Identity
- iTF_00145101;