Basic Information

Insect: Apodemia mormo
Gene Symbol: jockey\pol
Assembly: GCA_036924255.1
Location: JAUPFN010000024.1:22032835-22039498[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1e-11 9.5e-09 36.2 0.1 1 39 1221 1259 1221 1264 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1e-11	9.5e-09	36.2	0.1	1	39	1221	1259	1221	1264	0.94

Sequence Information

Coding Sequence: atgGATAAACAacttaaactaaatatttatcaatGGAACGCTCAAAGCATTAACCCCAAAAAAACTGACTTTGAAGCACTTCTTTGTAAAGAGAAGGTTCATATTGTATGTCTTTGTGAAACCTGGTTAAGTTCGGATTGTAGTTTTTCTATAAAAGGTTACAATGTGTTCCGTAAAGATAGGGCAGACTCTTACGGAGGCGTGGCTGTACTCACGCACAATTCAGTCAAAGCTCAATTGTGCTCATTTACCGATTGCAATTGTAGGTGTACTCAAACACGCCAGTCAGGAATTGAAATCCTACATGTGAAAATCTTTAACTGTCCTTTTATAGAAGACTTAATCTCACTCTATTGCCCACCTTCTGTACATACCTCTGTTGTAGATTGGGAAATGGTCTTCTCCATTGCTTGTatcaaaacaattattttaggaGATTTTAATGGCCACCATACGAACTGGTCCTACAAAACAGATCACAGGGGTGCCCAAATATTTGATGCTTTATTGGACAAAAATTATATCACTTTAAACGACGGGACTCCAACTCGATTAAAATTGGTAAATGGTATCCTACACAAGACTTCTCCAGATGTGTCCGTCATATCTTCGGACGTAAGCCTTAATTTTAATTGGCAAGTTACTAACGAAACACTGGGAAGTGATCATCGCATTATCCATTGTTCGGTGATATATCACACCCcttcaaatttcaataaaaaaagaaactttaAAAAGGCCGATTGGGATTTATATCGAActtatattctcaaaaaaatagcTAACTTTAATATTCCTAATGACCCTCAAGTAGCTTACGATCAACTATTAGAAATAATTAATCAAGCCGCAAATTCGAGTATcccttattataaatttaaccaGAATCCTAGCAGAAACTTTAGCCCTAAACCGTATTGGTCACCCATTCTGTCAAAAGCAATAGCCGAAAGACGTTTAGCCTTAGCAACTTTTAGGAAAAATTCTACCCCTGATAATCTAAATCTACTGCAGGAAAAAATCCGTGCTCAAAAATTACAAAGAAACGCTAAAAGTGAGAGTTGGCGCAAGTTTTGTTCTACTAttgatgaaagcacatctataAACGATATGTGGCGGCGTATGAGATGGCTAAAAGGTCACCGATACCTCGAAACTCTGATAGATCCCTCACTTACAGAACGCGTTCTAAACAACTTAACTCCTGATTTTACTTGTCCGCCTGAACCATCTTTTTATTCGGAAAACAGCAAACTGGAAGCTACTATTACTATGCATGAATTTAATAAAGCATTTAAATCTAAGGATACCGCACCTGGTATAGATGAAGTGTCGTATTCTATGATTCAAAATCTGCCAGAAAGTGCTAAACACATTTTAATTCGGCTTTATAATGTGTTTTTTACGTCAAGCTTCATCCCATCCCAGTGGCGGCAAATCAAACTGATATGTATTCCGAAGCCGGGGCGACAAGTAACATCGGAGGCAGCGCTAAGACCCATATCTTTGATATCTTGTATTTGCAAAATCTTCCATTCTATTATCAACAAAAGACTAGAGTGGTATATAGAACACAATGGCCTTTTTTCAGAGGAGATGGTGGGCTTTAGAAAAGGTCGTtcctgtatagataatttgaaCATGCTAGTCACAAGCATACAAATAGGCTTCTCGAAGAATCTTTTTACCGTAGGATGCTTTATTGATATTGACAGCGCATACAACAATGTAGACGTCACGAGCTTGTTATTGACATTGGATGAGCTTGGCGTAGGATCTAAATTCTGTAGATACTTGTGGTCATTtctaaaagaaagaaatttagGTGTGAAGGATACTAATGTCAATATTTCTAGAATAGCCAGACGTGGTCTAGCTCAAGGAGACCCTCTGTCCCCCTTATTGTTCAACGTTGCCACGATACATATATGTAAAGCTGTATCTAACATAGTAAACATAACACAATACGCAGATGACTTTGCAATTTATATATCTGCACAAGATTCTTTACAGGCTTCTATTCAATTGCAAGATgctcttaataaattattaacattatttggAAACCTTAATCTCAATATATCGTCATCAAAGagcaaaatttgtgttttaagTAAAGGCAACAAAAGGGAACAGGTCAATATTACAGTTAATAGTCACGATCTAGAAGTCGTAAGCGCTGTCAAATATCTTGGCATGTGGTTGGATCGATCTTTAAGGTGGGGAAAACACATTAATGAAGTGGCAGAGAGAGCTCTAAAATATCTCaatgttttaaaagtattatgtGGTCCTGGCTGGGGCGTACATCCTAAACACCTTAGAAAGCTATTCATATCATTAATAAGAAGCCGTATTGATTACGCTAGCTTTCTTTATGATTCAAGCGCAAAATGTCACTTAaccaaaattgacaaaattcaAAACCAGGCTATGCGGACTATTGGGGGTTTCCTAAAGTCTACACCCATACATGTTATGGAAAGCGAACTTTGCTTACATCCGTTATACCTCCGTAGGCTTTACTTAGCtggtaaatattttgttaaactgAAATCTATTCAGCCTAGTCGCAAGTATAACCTTATTGCAGAATTAGCAGATCTTTGCAACTCTAGATACTGGATGAACAAAAAGAAACCTCTAGTATCACTAGCCTTTCAAAAGTTTGACATATTCGACAtacacttttataataaattcaatATGTTCTCACTTGATACATGGATTAGTAGTTTAAATTTAAGTGACACTATAGTTACATACATTAAAGACCTAAATTATCCTAAGAGAGAGTATCAATCTGTCTACttgaaaaacatttgtattgAATACATAAATAACCAATActataacttttataaaatttacaccGATGGCTCTAAATTACAAGAAGGCATTGGTGCAGCCTTTTTTGACCCTCAGACCGGTCTGAGTAGGAAATTCCAAGTCAAAACTAAGATTTGTATTATGGAGGCTGAACTAATAGCTATATCGGAAGCAATTTCATACGTAAAGAACACGAATCaagataaaattgttattttaacagATTCCAAAAGTTCGCTTCAACATTTGGCTCGGTGTACCTCGACTCTTCGAGGAACACCGATAGCCTACACAATATTGGACCAGCTCTCCAAATTACAAAGCAGACACCTAAAAGTAGTTCTCCAGTGGATTCCATCACACACTGGCCTTGGGGGCAATGAAGCTGTCGACTCATTGGCTAAACAGGCTATTTCAGACGGGATAATTTATCTTTATAGACCTTTCTATGCTAACTTTATCAGTACAATTAAAGAGGAATGTTATAGCTGTTGGAAGGAGTATTTCGACAAGAGATCGGCAGAAAAGGGTATTTGGTACAGAACAATCCAACCACATCCATTGAAAGCTCTATGGTTCGAGAGAACAGTTATAAATAGGATAGAAACAATAACTGCGCTGAGGTTGCGTTCTGGGCACACTCCTGGAAACAAATTTGCCTATCTTATGAAAAAGTCGCACAGCCCAAACTGCCCATCTTGTAATAAGTTGGATGATGTATACCATATTCTTACAGAATGTGTTCGGAATAGCCACCTCAGGCCTCAGTCTGATCCCAATAGTAGTCTAATTGTGCTTATGGTCACAATGCCTCCCAAACGGGCATTATGGTCAGAAGACGATCTGATCGCAGCTGTTAGAGCAGTACAAAGAGGAACTTTGAGTACGTATAAGGCTGCAGAGAGATATAAGGTTCCTAGAAGAACAATTAGAAATCATCTGCAGTCTGGCAGCTTAAAGAAAAGTTTGGGACGTAAACCTATATTAAATGATGAAGAGGAAGCTCAACTTGTGCAAAGGATAATCCGGTATTCTGAAATGGGCTTGCCTGTGACACCAAGAATATTGCGTCGATTGGTGTATAAATATTGTgagcaaaataatataaaacacaattttaatgaTGAGGGCAAACGCGCAGGCAAAGACTGGTTCAAAGCATTCATGAAAAGACACCATGAAATATCCGTAAGAAAAGCGCAATTCATGAACCCAGCTAGAGccctaaaactaaataaatttattgttgaTGACCATTTTAAAAAACTGAGAGATATCTACGATAAACTTGACTTATATGATCATCCCGAgaaaatttacaatatggatgAAAAAGGATGCCGTCTCACTATCCACCACCAGCAAAGTGTTTTGGCCAAAAAAGGGGCTAAAAGAGTTCATTTGCAGTCTTCTGAACATGCTGAAAGCGTTACCATCGCAGGATGTGTTAATGCTCTTGGTACAGCCATACCACCTATGGTCATATTTAAGGGAAAACGATTGAAACCAGAATTGTACGATAATTTGCCTCAAGGGTCTCTAGTAGAAAAATCAGCAAAGGGATATATGACCAATGaacttttcaaaatatttttaaaacacttgTCTAGATACAAAAGCCAGGGACCATGCCTCTTGATATTTGATGGAGCAGCATGTCATTTAGATCTTTCCATAGTTGATATATCAGATTCACTTGGCATTAATTTGTACTGCCTACCTTCAAATACAACACATGAATTACAGCCCCTCGACAAAGCCGTATATCGATCATTCGAGCACCACTGGGATGCTGAATTGTTATCATTTTTGGACCAAAACAGAGCCAAAAAACTCACTAAAGCACGCTTTAATATCATTCTTTCAAGTGTTTGGTCTAAATGTATGACACACACCAATATTACGAGTGGCTTTAAAGCGACTGGCTTGTATCCCTTTAACCCACAGGCCATACCAGAAATAGCTTTTGCCCCTTCCATTTTAACGGAACTTCCTGCACCAGACGCTGCGCAAGAAATCGCACCAGCTCTCGATCATCCTCATGCACAAGTTACAGAATCTGGAGATACAACACCATCTATTTTGTCGGAAGCCTCAACGCCTGATCGTGATCAAGAAAATATACCACCACTAGAATCTGCTGCTAGTTCACCATCAATTTTGACACCTATTCCAATACCCAATGTCATGCTTGGAAATATTTCACCTGTTGATTGTCTTCGACCAGCAACTCCAGAACAAACTAAGCAATCACCAGCTATAGCATCAACATCCACAGATGAATCTGATTATTTACCACTCAGTCGGTTGAAAAGAAATGATTTTTATGATCTTTTGCCTACGCCTGTTAAAGTTCAATCATGTACACCGACTGTTAGACGAAAAGCCATTAATTATCGAGGTACTGCAGTCACAAAAGATCTATTTGATAAATATAatcaagataaaataaatattaaagaagtgAAAGGTaacaaaagaaagaaaaataaacgAGACGAAAACTTCACTGATGTTAAAACaggtagaaaagaaaaaatgaagTTTAAAAAGACTTTAAATCCTAAGAAAGCTaaaatcgtatctgcaaaaAAGTCTACTACCGTCAAAGGTAAATCACAAAAACAAGTGAGTTGGTACTGTCATGCCTGTAAAGAAGATAGAATGGACGATGCAATGAGGCAATGCTCGCGATGCTCCAAGTGGTACCACGAAGAGTGTGTCGGTTTGACTGCAGAAGATATTGACGACTTTCAATGTCCTAATGGATGCGAATAA
Protein Sequence: MDKQLKLNIYQWNAQSINPKKTDFEALLCKEKVHIVCLCETWLSSDCSFSIKGYNVFRKDRADSYGGVAVLTHNSVKAQLCSFTDCNCRCTQTRQSGIEILHVKIFNCPFIEDLISLYCPPSVHTSVVDWEMVFSIACIKTIILGDFNGHHTNWSYKTDHRGAQIFDALLDKNYITLNDGTPTRLKLVNGILHKTSPDVSVISSDVSLNFNWQVTNETLGSDHRIIHCSVIYHTPSNFNKKRNFKKADWDLYRTYILKKIANFNIPNDPQVAYDQLLEIINQAANSSIPYYKFNQNPSRNFSPKPYWSPILSKAIAERRLALATFRKNSTPDNLNLLQEKIRAQKLQRNAKSESWRKFCSTIDESTSINDMWRRMRWLKGHRYLETLIDPSLTERVLNNLTPDFTCPPEPSFYSENSKLEATITMHEFNKAFKSKDTAPGIDEVSYSMIQNLPESAKHILIRLYNVFFTSSFIPSQWRQIKLICIPKPGRQVTSEAALRPISLISCICKIFHSIINKRLEWYIEHNGLFSEEMVGFRKGRSCIDNLNMLVTSIQIGFSKNLFTVGCFIDIDSAYNNVDVTSLLLTLDELGVGSKFCRYLWSFLKERNLGVKDTNVNISRIARRGLAQGDPLSPLLFNVATIHICKAVSNIVNITQYADDFAIYISAQDSLQASIQLQDALNKLLTLFGNLNLNISSSKSKICVLSKGNKREQVNITVNSHDLEVVSAVKYLGMWLDRSLRWGKHINEVAERALKYLNVLKVLCGPGWGVHPKHLRKLFISLIRSRIDYASFLYDSSAKCHLTKIDKIQNQAMRTIGGFLKSTPIHVMESELCLHPLYLRRLYLAGKYFVKLKSIQPSRKYNLIAELADLCNSRYWMNKKKPLVSLAFQKFDIFDIHFYNKFNMFSLDTWISSLNLSDTIVTYIKDLNYPKREYQSVYLKNICIEYINNQYYNFYKIYTDGSKLQEGIGAAFFDPQTGLSRKFQVKTKICIMEAELIAISEAISYVKNTNQDKIVILTDSKSSLQHLARCTSTLRGTPIAYTILDQLSKLQSRHLKVVLQWIPSHTGLGGNEAVDSLAKQAISDGIIYLYRPFYANFISTIKEECYSCWKEYFDKRSAEKGIWYRTIQPHPLKALWFERTVINRIETITALRLRSGHTPGNKFAYLMKKSHSPNCPSCNKLDDVYHILTECVRNSHLRPQSDPNSSLIVLMVTMPPKRALWSEDDLIAAVRAVQRGTLSTYKAAERYKVPRRTIRNHLQSGSLKKSLGRKPILNDEEEAQLVQRIIRYSEMGLPVTPRILRRLVYKYCEQNNIKHNFNDEGKRAGKDWFKAFMKRHHEISVRKAQFMNPARALKLNKFIVDDHFKKLRDIYDKLDLYDHPEKIYNMDEKGCRLTIHHQQSVLAKKGAKRVHLQSSEHAESVTIAGCVNALGTAIPPMVIFKGKRLKPELYDNLPQGSLVEKSAKGYMTNELFKIFLKHLSRYKSQGPCLLIFDGAACHLDLSIVDISDSLGINLYCLPSNTTHELQPLDKAVYRSFEHHWDAELLSFLDQNRAKKLTKARFNIILSSVWSKCMTHTNITSGFKATGLYPFNPQAIPEIAFAPSILTELPAPDAAQEIAPALDHPHAQVTESGDTTPSILSEASTPDRDQENIPPLESAASSPSILTPIPIPNVMLGNISPVDCLRPATPEQTKQSPAIASTSTDESDYLPLSRLKRNDFYDLLPTPVKVQSCTPTVRRKAINYRGTAVTKDLFDKYNQDKINIKEVKGNKRKKNKRDENFTDVKTGRKEKMKFKKTLNPKKAKIVSAKKSTTVKGKSQKQVSWYCHACKEDRMDDAMRQCSRCSKWYHEECVGLTAEDIDDFQCPNGCE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -