Amor006740.1
Basic Information
- Insect
- Apodemia mormo
- Gene Symbol
- -
- Assembly
- GCA_036924255.1
- Location
- JAUPFN010000005.1:12733366-12733917[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.6e-13 3.4e-10 40.9 0.2 2 40 14 52 13 56 0.89 2 2 3.3 3.1e+03 -0.6 0.0 16 23 129 136 120 138 0.73
Sequence Information
- Coding Sequence
- ATGGAGCCACCAGTTAAAAAACAGCGAGGAAATTGGAGTGAATCTCAACTAAAGGCAGCCCTTGAAGCAATAAAGAACAGAAGGATGTCACAGCGAGAAGCAGCTACCAAATATAGTATACCAAGGCGCACATTAAGAAATCACCTCAAGTCTGGATCCACACAAAAAATAACTGGTCGCCTCCCTATACTTATTAAAATACAGGAAAGTGAGTTACGTAAAAGAATAATTAGACTTGCACAGATAGGCATGCCATTGTCACCTAAAATTGTACGGAAACAGACTTACGAATTTTGTAAAGCCAATAATATACCGAATccttttaatgataaaaagagTATTGCGGGGAAAAAATGGCTTAGAAATTACATTAAACGCAACCCAGAAATATCTCTTCGAAAGGCTCAAGTGTTAAATCCAGCAAGAGCGCAAAAGCTCAACAAAATTATTGTGTTTAAACATTTTGAAGTCCTTAAAGAATTATATGatgaattaaatatttctgcTCATCCGGAACGACTTTATAATATGGATGAAAAGGATGTAGGTTAA
- Protein Sequence
- MEPPVKKQRGNWSESQLKAALEAIKNRRMSQREAATKYSIPRRTLRNHLKSGSTQKITGRLPILIKIQESELRKRIIRLAQIGMPLSPKIVRKQTYEFCKANNIPNPFNDKKSIAGKKWLRNYIKRNPEISLRKAQVLNPARAQKLNKIIVFKHFEVLKELYDELNISAHPERLYNMDEKDVG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01367619;
- 90% Identity
- -
- 80% Identity
- -