Amor005475.1
Basic Information
- Insect
- Apodemia mormo
- Gene Symbol
- -
- Assembly
- GCA_036924255.1
- Location
- JAUPFN010000004.1:18109050-18109643[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-16 3.9e-13 50.3 0.0 2 42 83 124 82 127 0.94
Sequence Information
- Coding Sequence
- ATGTTGGAGCATACTTACCCTCGGTACACGAACGCTTGCATCGGGAGCGGCGGCCTGCAACCGGACCAAGGGATGTACCTCAACAATGTCATTAACCCCCATGGTGACTCAGATCTCAGTAATTATGGACAGGGTCTTGGTCTTACGGGGCCCGCCCCGGGTCCAAGCTGTGCCGCCGAAAACCAAGGTGTTCAACAAATGCAACAGGTACAACCGAAACGTCGGCGAGCCTCCAACCCACAAGCAGAAGAAAACTTTCAAAGAGCCCTAGAGGCTGTGCGCTTCGGTGGAATAGGCTTCTGTAAAGCGGCAAGAATGTTTGGTGTTAACAACAGGACACTGTGGTTAGAATATAAAAAGAAAGGTTATCCCAATAACCGTCCAAGCATAAAAAGCCGAATAAAAAGGGAACACGTAACGCCTCCGCCGGAGCATAAAGAAGATCCACCTCAACAAGACCAACAGATGGCACTAATATGTCCTCCGCACCCGGTTTCTATGGGTTTTATAGATCCAAGGCCGGTGGATTTTCCTTTGCAAGTGAACAATTCTCCcctgaatattataaatggtgtGAATTTCCCGATGCAATAG
- Protein Sequence
- MLEHTYPRYTNACIGSGGLQPDQGMYLNNVINPHGDSDLSNYGQGLGLTGPAPGPSCAAENQGVQQMQQVQPKRRRASNPQAEENFQRALEAVRFGGIGFCKAARMFGVNNRTLWLEYKKKGYPNNRPSIKSRIKREHVTPPPEHKEDPPQQDQQMALICPPHPVSMGFIDPRPVDFPLQVNNSPLNIINGVNFPMQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00695399;
- 90% Identity
- -
- 80% Identity
- -