Amor030812.1
Basic Information
- Insect
- Apodemia mormo
- Gene Symbol
- Mblk-1_1
- Assembly
- GCA_036924255.1
- Location
- JAUPFN010000023.1:6387851-6459648[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.6e-14 1.5e-11 45.2 0.0 1 39 272 311 272 316 0.93 2 2 2.5e-18 2.4e-15 57.3 0.0 1 43 484 527 484 529 0.95
Sequence Information
- Coding Sequence
- ATGAGTCTAGAACGGGTGGCGGAGGAGTTGATGGGTCGAAGAAAATGGAAACTACTATACCAGGACGGATTAGTGCCAAAACGAGTGGAAGGAGAGCCCTCCAGCGACGAAGATTCCATACCTGCCACAGACCCCCCTGCAGGGCTCAAAATAAAGACAATCGAGCAGATCAACGCGCCGGAGAAGACAGAGGAAGAAGAGACGGCAGGAGAGAGGAAACGGCCGGAGACAATCTTGGAAAGTTTAATCAAGAGGCCAGCGACGCAGCCGAAAGTGGAGATCCCAGAAGAGCCAGCGGATTGGAAGCCCGCAGACAGGTGTTATTTTTGCGTGGATGGAGAGAGGGGTGAAACTACACAAGAGAGGGCGGCAGGCGCAGTGAGTCCGGCGTCAGAATCGGACAGCAGTTCGGTGTCCGGCGCGAAGAGTCCAGCAGCGCCGCAGCTCCTGCAGCATTTACTACAGCTGCAGTTGCAGGGGCAGAATCCTCAGGCGATAGCACAGTTCCAGCAAATATTCACGGCGCTGGCGGCTCTGGGCTCGGGGCTGATGCCTCCGGCGCTCATGTCACAAGCCATGATGATGCAGCGGCTAGCTTCCACCAGGCCTCCAGTCGACAGGTTGTCAGAAGTTGGTGACAAGGTGCCAGCTCCGAGCTCCTCTCCAACCGCTGAGCAGCCACTAGACCTCAGCGCCAAGTCCACATCCAGCACAAGCGGGACACCTCCACCTGATGCCAAGAACTTGGACAACTCTAGATTAAAGCGAGCTGTCCTCGAAGGTGCTGGTAACAGTGCGACAAGACGCACTTACACTGAGGATGAATTACAATCAGCCTTACGCGATATCCAATCGGGAAGGCTCGGGACACGTCGTGCTGCGGTCGTGTATGGAATCCCACGATCTACACTTCGAAATAAAGTAAACAAGTTTGGACTCACCTCAGAAGCCCAAGAATCTGACCTCGACAGCGATCCAGAGAAGCCCGATTCCCCCCAATCAGTAATCCTCAAAATACCAACATTCCCGCCACCCGATGAAAAAAGTCCATCACCGGCTACCCCCGTCACTACACCGGTCACTCCTATCACACCTATTACTCCGCTTATAGCACTCTCCACACCTTTTAAAGACCCATCGTCTCAACTCCTTCTACCTCCGTCTGTGTATGCGGATCCACCGACCAACCCAAATATGTTTACGTCTATAAATGACGTTATAGCGAAAAGTATCAGTCAACAGTTCCAACAACCCTTAGATAGGCCCCATCAACCAACGGATCTCCCATTTATGCGGGCACCAGATAGACATGTGTCAGTTATTAAGACTCCTCCAGAAAACCAGAGAAATTACGCAATGCCGAGTAATTCAAAGGCGACTAATAATAATGGACAACCAGTGGCGGGTGGCAAAGGCACAAGACCCAAGCGAGGGAAATATAGAAATTATGATCGAGATAGTTTAGTGGAAGCTGTGAAAGCGGTTCAAAGAGGCGAAATGTCAGTGCATAGGGCTGGTTCCTATTACGGTGTGCCACATTCGACTCTCGAGTACAAAGTAAAAGAGCGGCACCTAATGCGGCCGCGGAAACGCGAACCGAAACCTCAGCAAGATAGCGTTATGAAGCCTCAACCTCCCAAACCGCCACCGAAACCTCCGACAAAGTTCACTAATGGTCTGAACGGTCCAGAGCCAAGTTACCCGCCGAGTTATCCTTTTTGGGCGGGAGGAGGCTTCGCTCCTCCACCTGCGCCGAATTTGTATGCATCGCATATGATGAGGAAGCTCAGAGAGGAGGCTCCACCGCCAGCGAATGGATCCTTTTTAGAGGGAATTATTCGGTCGAGTTTGGAACGATCGACTTTGGAGCGGCCGAGTGCGGCATTGTTGCAGCGACTAAGCGGTGGGACTTCGCCACCGAGCGGTGTGCGCCGGCGGGGAGACAGCGAGAGCGGCGAGGAGCCCGCGGCGCGGCGCGCGCGGTTCGGCGCCGACCACGCCATCGCCGCCGACATACGGGAGGCAGTGCAGAGACTCCGGGCAAGAAACGGAACTCCCACCCCTCCCCCGGAGCCAGAACGCTCCGCCTAG
- Protein Sequence
- MSLERVAEELMGRRKWKLLYQDGLVPKRVEGEPSSDEDSIPATDPPAGLKIKTIEQINAPEKTEEEETAGERKRPETILESLIKRPATQPKVEIPEEPADWKPADRCYFCVDGERGETTQERAAGAVSPASESDSSSVSGAKSPAAPQLLQHLLQLQLQGQNPQAIAQFQQIFTALAALGSGLMPPALMSQAMMMQRLASTRPPVDRLSEVGDKVPAPSSSPTAEQPLDLSAKSTSSTSGTPPPDAKNLDNSRLKRAVLEGAGNSATRRTYTEDELQSALRDIQSGRLGTRRAAVVYGIPRSTLRNKVNKFGLTSEAQESDLDSDPEKPDSPQSVILKIPTFPPPDEKSPSPATPVTTPVTPITPITPLIALSTPFKDPSSQLLLPPSVYADPPTNPNMFTSINDVIAKSISQQFQQPLDRPHQPTDLPFMRAPDRHVSVIKTPPENQRNYAMPSNSKATNNNGQPVAGGKGTRPKRGKYRNYDRDSLVEAVKAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKPQQDSVMKPQPPKPPPKPPTKFTNGLNGPEPSYPPSYPFWAGGGFAPPPAPNLYASHMMRKLREEAPPPANGSFLEGIIRSSLERSTLERPSAALLQRLSGGTSPPSGVRRRGDSESGEEPAARRARFGADHAIAADIREAVQRLRARNGTPTPPPEPERSA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00212348;
- 90% Identity
- -
- 80% Identity
- -