Basic Information

Gene Symbol
Kdm5
Assembly
GCA_036924255.1
Location
JAUPFN010000008.1:21081994-21084438[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.5e-22 8.2e-19 69.2 0.0 3 89 94 176 92 176 0.93

Sequence Information

Coding Sequence
ATGGATagcaaaaatattcaaaaaaatgcCATGCAGAAAAGTGCGGAGTTCACTTTCACTCCGCCACCTGAAGCACCCGTATTTGAACCAACTCCTGATGAGTTCGCTGATCCATTAGGATATATCGCCAAAATTCGCCCCGTAGCTGAAAAaactggtatatgcaaaataagGCCACCAGCACGCTGGCAACCACCGTTTTCTTTAGATGTAGATAAACTAAAATTCGTTCCACGAATACAAAAAGTTAATGAATTGGAAGCCATTACTCGCCTAAAGTTgctatttttagaaaaaatactaaaattctGGGATCTTCAGGGTTCGCCGTTAAAAATTCCTATGATCGAAAATAAAACCctggatttatattgtttaaaattttgggTCGATGAAGAAGGTGGTTTCGAAGGGTGTAACTCACCAAAAAAATGGCGTAAGATTGCCAATGCCATGGGTTACAGTCAGAGTACAAACACAATGAACTTTCTCAGAagtaattatgaaaaaatattgctaCCTTACGATATTTTTGAAAAGAGCAAGGCTGATATACTAAAGACAGTTAAAAAGACTGAACCAAAACAGGAAGTAAAAGATGATGGCAATGTCAAACAAATATTCAAAGAAATACCCATTGAATCCATTACAAAGATGGAAACtgaatgtataaaatatgaaaagcCACATACAAGTATTAAGAAAACAAAAACAGGATCTGACATTAAACCTGATGTTGATAGTGAAAAATCCAAAGTTGATTCAGATGATTTGAAACGCAGTAGAGAATTAAGAAGACTTGCCTGTTATGGACCTGGTCCTAAAATGCCTGGGCTTAATGATGAAGAATTCGACATCACTAAATCTAGAAAGCGGCCCAGATATGAAATGGACCCCTTAGCGGTCTATGTTTGCGCAATATGCCAAAAAGATCATAGAGATGATCTACTTTTAATATGCAATGGATGTTCAGACACATATCACACATTTTGTTTGAGGCCTCCTCTAAATGTAGTTCCAGATGGTGACTGGCGCTGTCCATGTTGTATTGCTGAAGAAGTTCATAAGCCAGCAGAAGCTTTTGGTTTTGCTCAAGCAGAAAGAGAATATACTTTGCAACAGTTTGGAGAAATGGCTGATAAATTTAAATCTGAATATTTTGGAATGTCGGGCCATTTAGTCCCTACAAATGTTGCTGAAAAAGAATTTTGGAGGATAATATCTTCTGTTGAAGAAGATGTAACTGTGGAATATGGAGCAGATTTGCATTCAATGGACCATGGATCGGGTTTCCCAACAAAGTCATCATTAAATCTATATCCCGGTGATCAAGAATATGTTGACTCTGGCTGGAATTTAAATAACTTGCCAGTTTTAGAAGGATCAGTCTTAAGATTTATAAATGCAGATATATCTGGAATGACTGTTCCTTGGATGTATGTGGGTATGTGTTTCTCAGCATTTTGTTGGCATAATGAAGATCATTGGAGTTATTCGATTAATTATTTACATTGGGGTGAATCAAAAACTTGGTATGGAGTTCCAGGAAGTGGAGCTGAATTACTGGAAACTGCTATGAAAGCTGCTGCTCCAGAACTCTTTAAATCTCAACCTGACTTATTACACCAATTAGTTACAATAATGAATCCTAATATATTGATGGCGGCTGGTGTACCTATATATAGAACAGATCAGAATGCTGGTGAGTTTGTTGTGACTTTCCCTAGAGCATATCATGCTGGTTTTAACCAAGGCTACAACTTTGCTGAAGCAGTTAATTTTGCACCTCCAGATTGGCTTAAAATTGGACGTGATTGCATAATGCACTACAAAAATTTAAAGAGGTTTTGTGTGTTCTCACATGATGAACTTATTTGTAAAATGGCTTTAGAAGGCGATCGTCTTGATTTAGAGACTGCCTTGGAAACCCAAAAGGAATTAATATGTGCAACTAAAGAAGAGGGTCGTTTGAGAGCATCCCTGGCCAGAAATGGacttaaaaatgtttgtcggACAGCATTTGAATTGCTTGGTGATGATGAGAGGTTATGTGAAGTGTGTAAAACAACATGCTTCCTTTCATCAGTGTCATGTGGAGAATGCAAACATATGGCATGTCTTCAACATGCAAATGCAGAAGGATTCTGCAAGTGTGCATTGGAAAAGAAAACACTATTTTACAGGTATGACATGGATGAATTGCATATAATGTTGCAGACAATTGATTTCAGAGTCGATAGTTTTGATAGGTGGATGACTGAAACAAAGAATATTCTCTTGCCAACTGCTCCTGATATTGGgagacttcaaaaattaaaagttttagtaGATGAAGCAGAAGAACTGAAAATACCAAAGTGTATCCTTTTGACCCAACTTAAAGATGAATATACAAAAGCTGCCGATAATGTAGAACCAATTGTTATTGAATTAGATGATGATTGA
Protein Sequence
MDSKNIQKNAMQKSAEFTFTPPPEAPVFEPTPDEFADPLGYIAKIRPVAEKTGICKIRPPARWQPPFSLDVDKLKFVPRIQKVNELEAITRLKLLFLEKILKFWDLQGSPLKIPMIENKTLDLYCLKFWVDEEGGFEGCNSPKKWRKIANAMGYSQSTNTMNFLRSNYEKILLPYDIFEKSKADILKTVKKTEPKQEVKDDGNVKQIFKEIPIESITKMETECIKYEKPHTSIKKTKTGSDIKPDVDSEKSKVDSDDLKRSRELRRLACYGPGPKMPGLNDEEFDITKSRKRPRYEMDPLAVYVCAICQKDHRDDLLLICNGCSDTYHTFCLRPPLNVVPDGDWRCPCCIAEEVHKPAEAFGFAQAEREYTLQQFGEMADKFKSEYFGMSGHLVPTNVAEKEFWRIISSVEEDVTVEYGADLHSMDHGSGFPTKSSLNLYPGDQEYVDSGWNLNNLPVLEGSVLRFINADISGMTVPWMYVGMCFSAFCWHNEDHWSYSINYLHWGESKTWYGVPGSGAELLETAMKAAAPELFKSQPDLLHQLVTIMNPNILMAAGVPIYRTDQNAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPPDWLKIGRDCIMHYKNLKRFCVFSHDELICKMALEGDRLDLETALETQKELICATKEEGRLRASLARNGLKNVCRTAFELLGDDERLCEVCKTTCFLSSVSCGECKHMACLQHANAEGFCKCALEKKTLFYRYDMDELHIMLQTIDFRVDSFDRWMTETKNILLPTAPDIGRLQKLKVLVDEAEELKIPKCILLTQLKDEYTKAADNVEPIVIELDDD