Basic Information

Transcription Factor Domain

TF Family: CP2
Domain: CP2 domain
PFAM: PF04516
TF Group: Beta-Scaffold Factors
Description: This family represents a conserved region in the CP2 transcription factor family.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 2 6.7e-15 1.6e-10 42.0 0.0 124 171 12 60 3 61 0.87

2 2 0.00088 21 5.7 2.2 204 221 59 76 58 78 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	2	6.7e-15	1.6e-10	42.0	0.0	124	171	12	60	3	61	0.87
2	2	0.00088	21	5.7	2.2	204	221	59	76	58	78	0.92

Coding Sequence: ATGACAGTTTGTACTTTTGCTTCAGATACTAAGAACAGCATTGGTCTAGCTGGCTGCATAGAGGAGGTGGCGCACAACGCTATCGCTGTCTATTGGAATCCACTCGAGAGTGCAGCTAAGattaatATTGCGGTGCAGTGCTTAAGTACAGACTTCAGCAGTCAAAAAGGAGTAAagGGAGCAGAAAGAAAGACACGAGATGAAGAGAGGAGAGCGGCAAAAAGAAAAATGTCTGcaacaaatagaaaaaaattggaTGAAATATATCACCCAGTCACGGAGAGAAGTGAATTTTATACGATGGCGGATCTAACAAAACCACCAGTTCTATTTAGTCCCGCGGAAGATATCGATAAGCTAGCTGGAATGGACATTCAGGGCTTTTACGGTCATGACGAAGCGGCCTTGGCTGAAGCTCACCTTAAGGGCGCTTCGCCGTTCTTGCTGCACGCTGCGAAACCTCAAGCGCCAGCGCTTAAGTTCCACAACCACTTCCCTCCAGATGCGCCAGcGTATCGATCGGACGTAGGCGGGCTATCACCATATAGCGATCGAAAAGATTCGCTCGAACTGGAGGGAGTGCTCGGTAAGCGCGCGCGAACTTCGACCCCGCCGCTCAGCGAGCGCGTCATGCTGTATGTTCGCCAGGACACCGACGATGTGTACACTCCACTTCACGTCGTGCCGCCTACCACGCAGGGACTACTACATGCTATTGAGAATAAgtacaaaatttcaagttcGGCAATTAATAATCTTTATCGAAAAAACAAGAAAGGGATTACGGCGAAAATTGACGATGAAATGCTCGCGTACTACTGTAACGAGGATCTGTTTCTGCTGGAAGTTCGGCCAGCGGGAGCCAGCGAGGACGAGCCTCTCTACGACATTACCTTCGTCGAGCTCTCACTGGAACACTAG
Protein Sequence: MTVCTFASDTKNSIGLAGCIEEVAHNAIAVYWNPLESAAKINIAVQCLSTDFSSQKGVKGAERKTRDEERRAAKRKMSATNRKKLDEIYHPVTERSEFYTMADLTKPPVLFSPAEDIDKLAGMDIQGFYGHDEAALAEAHLKGASPFLLHAAKPQAPALKFHNHFPPDAPAYRSDVGGLSPYSDRKDSLELEGVLGKRARTSTPPLSERVMLYVRQDTDDVYTPLHVVPPTTQGLLHAIENKYKISSSAINNLYRKNKKGITAKIDDEMLAYYCNEDLFLLEVRPAGASEDEPLYDITFVELSLEH

Sequence clustering based on sequence similarity using MMseqs2