Abak000303.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Apocrypta bakeri
Gene Symbol
ZNF219
Assembly
GCA_018906985.1
Location
JACCIA010000020.1:1812901-1819476[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 5.8e-06 0.00042 20.4 1.4 1 23 370 392 370 392 0.97
2 30 2.5e-06 0.00018 21.5 2.8 1 23 398 421 398 421 0.96
3 30 0.039 2.8 8.4 0.4 3 23 429 449 427 449 0.96
4 30 1.9e-05 0.0014 18.8 0.5 1 23 455 477 455 477 0.97
5 30 0.00045 0.032 14.5 1.4 1 23 483 505 483 505 0.96
6 30 7.5e-05 0.0054 16.9 0.6 1 23 511 533 511 533 0.97
7 30 0.16 11 6.5 6.5 1 23 539 562 539 562 0.95
8 30 0.00023 0.016 15.4 0.2 1 23 655 677 655 677 0.99
9 30 2.5e-05 0.0018 18.4 0.7 2 23 684 706 683 706 0.94
10 30 0.011 0.78 10.1 0.7 1 23 712 734 712 734 0.99
11 30 2.2e-06 0.00016 21.8 1.8 1 23 740 762 740 762 0.97
12 30 0.0018 0.13 12.6 0.5 1 23 768 790 768 790 0.97
13 30 0.00017 0.012 15.8 0.9 3 23 798 818 796 818 0.97
14 30 0.0059 0.42 11.0 3.0 1 21 824 844 824 845 0.93
15 30 0.012 0.86 10.0 0.0 1 23 930 953 930 953 0.96
16 30 0.00032 0.023 14.9 0.7 1 23 965 987 965 987 0.97
17 30 1.7e-05 0.0012 18.9 1.0 1 23 1012 1034 1012 1034 0.99
18 30 0.00027 0.019 15.2 0.1 3 23 1042 1063 1040 1063 0.90
19 30 0.039 2.8 8.4 0.2 1 23 1069 1091 1069 1091 0.97
20 30 8.3e-05 0.006 16.8 0.4 1 23 1097 1119 1097 1119 0.98
21 30 5.6e-05 0.004 17.3 0.4 1 23 1125 1147 1125 1147 0.97
22 30 0.00053 0.038 14.2 0.1 1 23 1153 1175 1153 1175 0.97
23 30 0.0001 0.0073 16.5 2.3 1 23 1181 1203 1181 1204 0.93
24 30 9.6e-05 0.0069 16.6 1.7 2 23 1354 1375 1353 1375 0.97
25 30 0.00068 0.049 13.9 3.6 1 23 1381 1404 1381 1404 0.96
26 30 0.00026 0.019 15.2 1.6 1 23 1410 1432 1410 1432 0.96
27 30 1.1e-05 0.00081 19.5 0.8 1 23 1438 1460 1438 1460 0.98
28 30 0.038 2.7 8.4 3.1 1 23 1466 1488 1466 1488 0.98
29 30 4.5e-06 0.00032 20.8 1.0 1 23 1494 1516 1494 1516 0.97
30 30 8.3e-05 0.0059 16.8 2.5 1 23 1522 1545 1522 1545 0.98

Sequence Information

Coding Sequence
ATGGAAGAGACTGACGTCAAAAATGTTGACAATAAGGGAATTATAATAAGGGACCGAGAGGAAATGACAGATAAGGGAGAGGAAATCAGAACTACGGAGTACTTCTTGGATGTTGGAGATGAAGCTGATGGAGATGAAGTTGACGAAACGCAATTTGTTCCTGTTCAGAGCGAACAAGATGCACAGTATGTTGCGGTGGAAGTTAATGATTCTGGTCAATTGATAATACCCGACAAGGAAGTCATACTCTGGAATGAGATCTGCAGAATTTGTGCCAACAGTGGAAACGATAAAGAATTTATTCCAATATTCGCTGGAGAAGGAGTGGAGCACGAATTGAGCAACAAAATTCATACGTATTTGCCAGTGAGGGTTTCTGAAAATGATACCCTACCGTTACAAGTATGTTATAACTGTGCAGCGACTATGATAGCTTGGGATGAGATATTTACAAGCTGTTTAGATGCACAGCAGCGACTTTTAGAAGTGCAAAGCAAATTAAATTTGAAAGAGCAGTATTACAATGACTCCACAGTTGAGGAAGATAATATGGGAACAGTATTAGAAGTTGAAACTGCCAATAACCAGGAATCTCCGGTGGATGTCAAGGATGAGAATTTGGAAACATTACAGATTGTTGAACCTAACAGGTGCAGAAGTTCACAGAGTCCAAAAAGAGATTCATCAAATAAACAGAAAATAAAAACAAAACTAATGAATAGAAAAAAATCATTAAAGTTGCTAAGCACTATAAGTGCAAATTCATATATGGTGCAAGAAACTGAGAATGTTCAAAAAGAGCCTGCTAATGAGAAAGAATTCCACGTAAGAAGCAGTTTGAAAGAAACTATAATCCATGACTTTAAAAGAAACGTAGATGTACTGAAAGATGAAATCTCAACAACAATAAGCGTCCAGGGAAAATGTCTAACATTTGCAGAAACAGAAAATAATGGAGGAAAAAGTCAAGAGAAAAGAGCTGATTATGCCAGATGTCCTAGAGAACAAATGGATCAGAATTCGGAGAAGTCTGATGAGGATGATTGCGGAAAAGCCTCCTCGGACAAGGACAAGCGACTCACTAGTAAAAAAAAGAAATTAATAACATTTGCTTGCGACGATTGCGGCAAGATCTTCAAGTTTAAGGACACTTATTCGCGACATCGACGCATCCATTCGGACGAACGGCCGTTTACCTGTCACGTTTGTGGAAAGCGCTTCCGCGACTCGGGCGGACTATGCCGCCACGTTCGAGACGTTCACGCGAAAGTGAAAAATTGGGCATGCAGCACTTGCAGCCGGAGCTTCGCCTCGAGAGCTACGCGTGACGATCACGAGCGTACTCATACCGGCGAGCGACCTTACATCTGCGATAGCTGCGGCAAGAGATTCAAGACAAAGGCCTCGCTCTACATTCACGCTAAAATCCACACAAATCTATTTCCCCATCCTTGCATGCAGTGTCAAAAAGGTTTCCGCAGGAGACAGGAACTATTGGCGCACGTGACGACTCATACTGGCGAGAAGAACTTTGAGTGCGACGTATGCTCTAAAAGCTTTAGGATAAAAATGGAGCTGAGGAGGCACGCGCTTAGTCATTCAGACAACAAGCCCTTTGCTTGCGATCTCTGCGACTTTAAATGCAAACAGAGACGGTACCTAAACAATCACGTAAAGCATAAGCACAGTTCAATGGGGAAGAGTCAGCCGATCGAGACGTCGCGTAAATGCGTGAAACTCGATGACGGCGGGGTCATCACCATCCTCACAACCGAGCCGACGGCGATCTTAGCAAGCGAATTGGACGAAACGGCGCTTATGTCAGTTCGTCGTCGTAAGCGCAGCGGCAAGCGGGATCCCCTGGAAATGGACTCCACGAAGAAGTCCAAGTCGTCGAACCGTACTGGCCAACGCCGACAGGAGATCGTCCGAGCTAAGGTAATCGTCGACGGCACCACCTACTACAAGTGCGCCGAGTGCCCGAAGCTTCTGTCCACTCCGTACAACTACATAGCGCACAAGCGCGTGCACACGCACGAGCGCCCGTGCACTTGCGAGATATGCGGCAAGAGCTTCACCGCGGGATCATCGTTGAATCGCCACGTGCGCGACGTTCACCAAAAGATCAAAGACTACAAGTGCGACTTCTGCGATCGCAGACTCGCCTCGAAGGTCGCTCGAGACGAGCATCAGCGCACTCACACGGATGAGCGGCCCCATGTCTGCGAGATCTGTGGCAAGAGTTTCAGACAGCGAGCATCGCTCTCGGTCCACAGAAGGTTCCATTCCAAGAGTTTCCTCTTCAACTGCAAACTCTGCGCCAGAGGATTTCCTAGAAAGCAGGACATGGAGAGGCACGAGTTGACGCATACCGATCAGAAACCCTACGGCTGCAAGCTCTGCGATAAAACGTTCCGAAGTTCGGCTTCAGCCATAAGACACCGGTCGACTCACGAGAACGATAATAAACACATCTGCGACGTCTGCGGCGAGTGCTTCAACCAAGACAGATATCTTAAGAATCACAAGAAAAAAGGCAATCCCGATATCTTTCATTTCAGAAAGGGCAGCAGCAATGAAAAAAGAGAACCCAGAGCTAAAGCAAAGACGCGGAGGCCTGCGCCAAGCCGACTCCCAGCCAAGCAGCTTGACAAGCCTGAAAAATGCGTCAACCATCCGGAAGCTATCGACCGTCTGCAACAACTGGTCGACCCACTGAAATTGGATGAATGTCCCGAGATCGATGAGCCAACAAAACAAGATGAGGAAAGCAACGACAATTTCATGTACATGTGTGGAGTCTGTGACAAGCTCTTCGAAATAGAAGCAGAACTGATGGGTCATATGCGCGAAATTCACGACGAGAACAAAACTGAAGTCAATCCAGTGCGCTTCGAGTGCAGCATATGCGATCGTTCGTACGCGTTGAAGAACTGCCTAATCAAGCATCTTGCTGTCCATAAAAATACTGTACACATGCCTGGCGAGATTAAACGCATCTCCAAGTCTAGGATTCGCCTGAATCGGTGCATGTATCAGTGTGATCTCTGCAAGAAGATTTTGTCAAACCGGAAAACGTTGCTGCGCCACATCCGGGTTCACAACGACGAGCGACCCATTATCTGTCAAGAATGCGGGAAGGCCTACCGCGTGGAGGAAGATTTGAAACGACACCAAGACGACGTTCATAGAAAAATCAAAAGATTTCCGTGTGATTTGTGCGAAAAATTTTTCGCCGCCAAGGGAACAAGAGATGCACATAGGAGAATTCACACAGGAGAGAAACCTTTCGAATGCAACGAATGCGGCAAGTTCTTCAGATCGATTAACCTGCTGGGAATACACAAAAGGGTCCACCGTGATTATCGACCCTACCAATGTAACTCTTGCGAGAAAGCTTTTCGAACAAAACAGAAACTAGAGGCGCACGAAGCTATACACACGGGCATAAGACCCTATCCCTGTGACGTATGTAATAAAACATTTGCGGCTAAAGGAGAAGCTAATAGGCATCGATCGGTGCACTTTAGCGACAGACCTTTTCTCTGCTCAGAATGTGGCCTGGCATTCAGACTTAATAGATACCTCAAGACACATATCAAGACGCATCATAAGGATAAAGTTGAAATTCTCTTGAAGTCGTTAACGGAATTTAAGGAAGTTCAGCAAACTTGCGCCAGCTTCAAAGAATTTCAGAAGTCCTACAAAGCAACTTTTCCGTCTTCCAAAGTTAGAAAAAAATGTCAATCCCCATCGAAGCCAGTGAAGAAGCGAACGAGCCGAACTATGCGGAAAACCCCACTAAAAAGCATATCGAGAGTAAAAACTGGTTCCGAAAAGCAGATTCCAATTTCAAAAGAAGAAAGCGATAGTCCAGAAGACTCCGAAGATTCGGTTTTCGCAGAAGGTATGGTAGAATCTCCACAATCCGACGGTGTTAACGATCAAGACGCTCACGATCCAGACTTCGAGTTGACGGATGTCTCGTCGAGCAGGCCGAAAAAGTCACGTCGCAAGCTCAGTCCTAATAACTCAAGCACCGCAAATGTCGTCAACCTCGAATGCACTCAGTGTAACAAAAAATTTCGCATGTACAATAGCTACCAAGTCCACATGAGAATACACACCGGAGAGAAACCTTACACCTGTCACATCTGCGGCAAGCAATTCGGCCAAACCGGTAGCTTGTATTACCATTTGAAGCACGTTCACGGTGGTGTTAAAAATCACGCGTGCGATATTTGCGGTCGGTGTTTTGCCATGAAGACAGCTATGGAGGATCACCGTAGGATTCACACGGGAGAACGTCCCTACGTCTGTGATTCGTGCGGCAAAACATTCAAGACTAAAGCCTCGCTCTACATTCACAGCAAAATTCACACAAATGAGTATCCATTTAAGTGCAGTTATTGTAAGAAGCTTTTTCGATGGAAACAACAGATGATAAGCCATCTAACAACTCATACAGGCGAGAAAAATCATATTTGCGATATCTGTGGCAAAGGTTTTGGGGTGAAGAATGAGTTGACGAGGCACCGGAGGACCCATTCGTTGGACAAGCCTTTTACTTGTCAAAAGTGCGGTGTCAGTTTCGGACAGAAAAGATATCTGACTAATCACAATCGAACACGGCACAAAATGAAAGCTGCTGACAGTTTGTAA
Protein Sequence
MEETDVKNVDNKGIIIRDREEMTDKGEEIRTTEYFLDVGDEADGDEVDETQFVPVQSEQDAQYVAVEVNDSGQLIIPDKEVILWNEICRICANSGNDKEFIPIFAGEGVEHELSNKIHTYLPVRVSENDTLPLQVCYNCAATMIAWDEIFTSCLDAQQRLLEVQSKLNLKEQYYNDSTVEEDNMGTVLEVETANNQESPVDVKDENLETLQIVEPNRCRSSQSPKRDSSNKQKIKTKLMNRKKSLKLLSTISANSYMVQETENVQKEPANEKEFHVRSSLKETIIHDFKRNVDVLKDEISTTISVQGKCLTFAETENNGGKSQEKRADYARCPREQMDQNSEKSDEDDCGKASSDKDKRLTSKKKKLITFACDDCGKIFKFKDTYSRHRRIHSDERPFTCHVCGKRFRDSGGLCRHVRDVHAKVKNWACSTCSRSFASRATRDDHERTHTGERPYICDSCGKRFKTKASLYIHAKIHTNLFPHPCMQCQKGFRRRQELLAHVTTHTGEKNFECDVCSKSFRIKMELRRHALSHSDNKPFACDLCDFKCKQRRYLNNHVKHKHSSMGKSQPIETSRKCVKLDDGGVITILTTEPTAILASELDETALMSVRRRKRSGKRDPLEMDSTKKSKSSNRTGQRRQEIVRAKVIVDGTTYYKCAECPKLLSTPYNYIAHKRVHTHERPCTCEICGKSFTAGSSLNRHVRDVHQKIKDYKCDFCDRRLASKVARDEHQRTHTDERPHVCEICGKSFRQRASLSVHRRFHSKSFLFNCKLCARGFPRKQDMERHELTHTDQKPYGCKLCDKTFRSSASAIRHRSTHENDNKHICDVCGECFNQDRYLKNHKKKGNPDIFHFRKGSSNEKREPRAKAKTRRPAPSRLPAKQLDKPEKCVNHPEAIDRLQQLVDPLKLDECPEIDEPTKQDEESNDNFMYMCGVCDKLFEIEAELMGHMREIHDENKTEVNPVRFECSICDRSYALKNCLIKHLAVHKNTVHMPGEIKRISKSRIRLNRCMYQCDLCKKILSNRKTLLRHIRVHNDERPIICQECGKAYRVEEDLKRHQDDVHRKIKRFPCDLCEKFFAAKGTRDAHRRIHTGEKPFECNECGKFFRSINLLGIHKRVHRDYRPYQCNSCEKAFRTKQKLEAHEAIHTGIRPYPCDVCNKTFAAKGEANRHRSVHFSDRPFLCSECGLAFRLNRYLKTHIKTHHKDKVEILLKSLTEFKEVQQTCASFKEFQKSYKATFPSSKVRKKCQSPSKPVKKRTSRTMRKTPLKSISRVKTGSEKQIPISKEESDSPEDSEDSVFAEGMVESPQSDGVNDQDAHDPDFELTDVSSSRPKKSRRKLSPNNSSTANVVNLECTQCNKKFRMYNSYQVHMRIHTGEKPYTCHICGKQFGQTGSLYYHLKHVHGGVKNHACDICGRCFAMKTAMEDHRRIHTGERPYVCDSCGKTFKTKASLYIHSKIHTNEYPFKCSYCKKLFRWKQQMISHLTTHTGEKNHICDICGKGFGVKNELTRHRRTHSLDKPFTCQKCGVSFGQKRYLTNHNRTRHKMKAADSL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-