Abak007334.1
Basic Information
- Insect
- Apocrypta bakeri
- Gene Symbol
- Myrf
- Assembly
- GCA_018906985.1
- Location
- JACCIA010000021.1:1839903-1848439[+]
Transcription Factor Domain
- TF Family
- NDT80_PhoG
- Domain
- NDT80_PhoG domain
- PFAM
- PF05224
- TF Group
- Unclassified Structure
- Description
- This family includes the DNA-binding region of NDT80 [2] as well as PhoG and its homologues. The family contains Swiss:Q05534 or VIB-1. VIB-1 is thought to be a regulator of conidiation in Neurospora crassa and shares a region of similarity to PHOG, a possible phosphate nonrepressible acid phosphatase in Aspergillus nidulans. It has been found that vib-1 is not the structural gene for nonrepressible acid phosphatase, but rather may regulate nonrepressible acid phosphatase activity [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.063 9.6e+02 -0.3 0.9 45 82 86 124 60 312 0.66 2 2 5.1e-31 7.8e-27 94.4 3.0 2 170 378 518 377 519 0.90
Sequence Information
- Coding Sequence
- ATGGATTTTGGCTGGACTGTAATATCCCAGGAAACTGAAACGCAACAAATTGACAACAACTGTGAGCCAAGTTCCGAAACTATTGTAGGACTTCACAAGATTCAAAATGAATCCAATGCCAGCATCGAGTACCCTGAAACGCGCAGACTGGTTCCAGGTACAGGACGGCGCGATTTCGTTGGAGCAATTGATAATGAAGCTTTAGACTTTTCTCAGTTAGAAGATTTTATAAATAGCGATGGGCAACAATCAGCCACGTACTTTGCCTCCACACTTGCTCACAATGAGAATAGTACGCCAATAAATCATGGAGTATGTATTGTTGAGATAACAGCTGATAGTAAACAGTTTTCATCGAGTTTACCTTCGCCCCCCATTCAAAGTCAGCCGATTACGAACTCCTGTAATTCTGCCAATGTGGTCGTTGCGTCTTCTTCTAGTAAAGGAACTCAATCTTATCCTCTTCTTTCCAGCAGTTTACCTGATAGCCCACCGGATAGTGGAAGTGAACCTCCTTACTCACCATCTGGCGATCACGAGGCTCAGCATTTACACTTAACTCATGAAAAAGTAAATCAGTCAAGAGAAATGTTAATTCAAAATCATCACGACGACAATGCAAATTACTGCGCCACTTTAATGACCTCTTCATCCCGAGCTGTAAGAAATCCTCAAGATATACTTATGATCTCGCAGCCTGTACTTGCTCCATTTTTAACGACAAATGCATCAAATATACAACAGCAACCAGTCGTGCCATTGCAATCAGTAGTCCTTGAGCAGCGCCGACAAAAACAAAATTCTAATAGTAGTATTATGACTGTATTTACATCAATCGCACCAGCTTCAAAAAAAAGGAAATATAGCCAAGATGAAGTAATACAAGTAAAGCAGGAACCGGAATTAGTCAATATAGGGTCTAGTCGCAGTAGTAGCATCGCAGAATTTGACAATGATGAAGCAAACGGGGAAAATAACTTATCTGATACGAATTATCAGTGCATTCGATTTTATCCTTTCCAACAGACGTTTTGGCATGCATTGTGTGATCATAATTTAAAAGAACTTCCATTTCCACATTATAGAATTGACGCAGATAAAGGATTTAATTTTAGTAATTCGGATGATGCTTTTGTGTGTCAGAAAAAAAATCACTTTCAGATCACTTGTCATTCTCAATTGCAAGGAGAAGCTGTTTTTGTAAAAACGCGTGAAGGATTAAAAAAAATTAGTAATTTTCAACTTCATTTTTACGGTGTAAAAGTAGAATCTCCAACACAAACTATCAGAGTTGAACAAAGTCAAAGTGATAGAAGTAAAAGGCCATTTCATCCAGTCATTCTGTTTAGGATTGATGTTGGTGAAGAGCGTGTCACAAAGGTGACAGTTGGACGCTTGCACTTTAGTGAAACTACCAGTAACAATATGAGAAAAAAGGGTAAGCCAAATCCAGATCAAAGGTATTTTCATTTGGTCGTCGGTCTTCATGCTCACACATCTGATCAAGCAAACTATCAAGTGATTGCACATGCCTCAGAAAGGATAATTGTTAGGGTATACTTCATTATTCATTTCGGTATCTATAAACTTTGGAGAAAGAATTAA
- Protein Sequence
- MDFGWTVISQETETQQIDNNCEPSSETIVGLHKIQNESNASIEYPETRRLVPGTGRRDFVGAIDNEALDFSQLEDFINSDGQQSATYFASTLAHNENSTPINHGVCIVEITADSKQFSSSLPSPPIQSQPITNSCNSANVVVASSSSKGTQSYPLLSSSLPDSPPDSGSEPPYSPSGDHEAQHLHLTHEKVNQSREMLIQNHHDDNANYCATLMTSSSRAVRNPQDILMISQPVLAPFLTTNASNIQQQPVVPLQSVVLEQRRQKQNSNSSIMTVFTSIAPASKKRKYSQDEVIQVKQEPELVNIGSSRSSSIAEFDNDEANGENNLSDTNYQCIRFYPFQQTFWHALCDHNLKELPFPHYRIDADKGFNFSNSDDAFVCQKKNHFQITCHSQLQGEAVFVKTREGLKKISNFQLHFYGVKVESPTQTIRVEQSQSDRSKRPFHPVILFRIDVGEERVTKVTVGRLHFSETTSNNMRKKGKPNPDQRYFHLVVGLHAHTSDQANYQVIAHASERIIVRVYFIIHFGIYKLWRKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -