Abak003815.1
Basic Information
- Insect
- Apocrypta bakeri
- Gene Symbol
- retn
- Assembly
- GCA_018906985.1
- Location
- JACCIA010000001.1:13003129-13007091[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.5e-20 7.8e-17 61.2 0.0 13 89 1 75 1 75 0.95
Sequence Information
- Coding Sequence
- ATGAGGAAAAAATGCACACCGATCAACAGACTGCCCATAATGGCGAAATCCGTGCTGGACCTCTACGAACTGTACAATCTGGTGATAGCGCGCGGCGGTCTCGTCGACGTCATCAACAAGAAGCTCTGGCAGGAAATCATCAAGGGACTTCACCTCCCGTCGAGCATAACCTCTGCGGCGTTCACGCTGCGCACCCAATATATGAAGTACCTCTACCCGTACGAATGCGAGAAGAAGAGCCTGTCGACCCCAGTGGAGCTGCAGGCAGCGATAGACGGTAACCGACGCGAGGGCCGTCGCAGTAACTACGGTGCATACGGTGGGGGCGGCGATGCCGGTCAAACCGCTCAACAGCTCATGCACCAACGCAGCGCGCACACACCCTCGTCCCTGGCCTCGTTGCACCAGCAGATCTCACCGCTGTCCTTGGTCACGGCGGCGCAGCAAGCCGCGGCAGCGAGCGGACTTCACCAGGTCGGACCACAGAACCCCGTGAACGGAAGCGCGGCGCACACGCCCCTCCTCCACCACCCGCACCATCCGCAACACGGCCAGGCGGGACTCGGGCAAACACCCATCGCGGGTATGGCTCCCGATCTGGAGGTGCGCATGGCCGAGTACGTGAAGCGACTCCAGCACGAGATGGGCCGCAGAGCCGCCGGCTCGCCGAACAGGCTGATCCACCGACAGGGCAGCACTTCGCCACCGGCGAGGTCGCCGTCGCGCGACGCCGCCCTCTTCGAAATGTCGCGATTCACGCTGTGGAACATGTACAACAACAACCTGCACCCGGGTATCGGCTACCCGCCCTCGGCCGTGTCGCCCCACAACAGCTCGCACTCGCCCCAGCCGCAGCCCAGCAGTCCCGAGCCCCAGAAGGAGGCGCTCGACTTGGGCCTCAGGTCATCGCCCAGCTCGTCTTCGCCAGCCCGACAGAGTCCGCCATCGTCCGGCGGTGGCAGCATCGCCATCAAGCGCGAGCTCGAGCTGAGCAGCGGCTCCTCGAGCCAGAAGAGGCTACGCATGGACGAGGAGAACCCCGCGGAAAGCACTGTACCTGCTCTCCCCGGCACGCACATCAAGATCTCAAACCGAGGGGACGGTCGCGACAATTCGCTCGTCGTCAGCATGGAGCTCAACGGCGTCATGTACCAGGGCGTGCTCTTCGCGCAGACGGACGGCCGGAGCAGCCTCAACGCCTCGACCAACAACAACGAGACCAAGACCTCGACGCGTAACGTCGTCTCGTGA
- Protein Sequence
- MRKKCTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQYMKYLYPYECEKKSLSTPVELQAAIDGNRREGRRSNYGAYGGGGDAGQTAQQLMHQRSAHTPSSLASLHQQISPLSLVTAAQQAAAASGLHQVGPQNPVNGSAAHTPLLHHPHHPQHGQAGLGQTPIAGMAPDLEVRMAEYVKRLQHEMGRRAAGSPNRLIHRQGSTSPPARSPSRDAALFEMSRFTLWNMYNNNLHPGIGYPPSAVSPHNSSHSPQPQPSSPEPQKEALDLGLRSSPSSSSPARQSPPSSGGGSIAIKRELELSSGSSSQKRLRMDEENPAESTVPALPGTHIKISNRGDGRDNSLVVSMELNGVMYQGVLFAQTDGRSSLNASTNNNETKTSTRNVVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00079598;
- 90% Identity
- iTF_01274262;
- 80% Identity
- -