Basic Information

Gene Symbol
ARID5B
Assembly
GCA_018906985.1
Location
JACCIA010000022.1:453288-460298[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.6e-25 3.6e-22 78.3 0.0 1 89 243 329 243 329 0.95

Sequence Information

Coding Sequence
ATGTTGGTCCTAAAATTAGACCGTGATAAACTTATCGAACCACACAAATGTGATCACGACGAAGTACTGACTATCTCGGAAAAAGTAGTGGTGCGCGTGCACGACTTGGTCACATGGTTGTCTCCGTCGCTCGAGTGGTCGTGGGGACGCGAAGTTTCCTATCCTCCGACGCCCTTGTCTTCACCAGACAGCAGTCCACATCCCCAGGTATTGTCGGATCCCGGGATCGATTTCTCCGATGTCGAACGTCATCAGAAAGATTTGGATGCCTTGACGTCTTCGACGCGACGCAGCGAGCCCGTCAACCAAACCAAAGTCGTCGTCCTCTCGTACCCGAGGTACTGCCGCTACAGAGCTCTGCTGAGACGTCTGGAAGGCTCCGAACCATCGTGGCTTTGTTCGTCCATTGCTGCGGCTCTCGGAGGATTCAAAGCCCTACCTGGCACGAGAGTACTTTTCTGCAGGGACACCTTCGACTATCCTGACCTCGAGACACACGAATTGCTTTGCAATCATTTAGCGCCAAAATTAAAAGGTCGACCTCGTAGAAAACGCACAAAACGTAGCGTATCACCAGCCGGCGAATCGAGCAACGAGAGCGAAGCTTCCGTGGCGTCGTCGGCAGCCGCTTCGACGTCCAAGGGTTCGAGCTCGTCGTCCGGACAGTCGTCGGGTAGACCGTCAGCCGCCTCAGTCGCGCGACGCAGCGAGCGCAAAATCAGTCCCGAGGAGAAAAAGTTCCTCGATGACGTTTACGGCTTTATGTCCTCGCGTAACACACCTATCAGCAAGATGCCTCTTCTCGGATACAGACAAATTGACCTGTATCTCTTTTACACAAAAGTTCACGAACTGGGCGGTTACGACAAAATTAGCGCGAACCGTCTTTGGAAAACGATCTACGACGAAATGGGTGGTAACACGGGCTCAACGAGCGCAGCGACGATAACGAGAAAGCACTACGAAAGGTTACTGCTGCCGTACGAGAGATATCTAAAAGGCGAAGAAACAAAGGTCAGGCCAAACCAGGGCGGACGACGAGCCAAGACGCCCAGTACGTCCGACCTATCGGAGAATTCAGTGGAAGTCAAAAGAGAGACGGACAGTCCGCCTCCGCCGTCCGTCACTCCACCACCTTCCGAAGCATCTAACTCGACAGCTACACCTCCTCCTCTACAGTCAATCCTTTCGACTTCGCCATTCTTGCCGGGAGACAAGCCGGGTAAGACGTCGTCGCTGCGGAGCGTGCGGGTAAAACCTGAGCGGCTCAAGTCCCTCAACACAATAATAGCGACCAGCAATCCAGCACAATCTGCCAATCAGCAACAACTGCCCAGCTCGCCAACTTCTCTAACGACCGCGACGTCGAATACTGCGACTTCGTCGTCGGCAGCGTCTTCGCCGACGAGCACGCCGCCAGCTTCGACCACACCAACGAATCCCAGTGCGCAACACAGCGTACTCGAGAGGCAGCTGAATAGTCCACTCATAACGCAACAAGTACCACCAGCGTGTTCATCGCCCGGACTGCCCGTCAGCACAGTGGCTGCAAACGCGACGACCGTGGTGACGCTTACACCTCCACCGGAAAAAGATATGAAGGAAATAAAGCTCGACCCGAAACAGACGAGCCTTCTCGCCCAAGGAAAGGAGAACATACCATTATTCGAGGAGAAGAGTACAATTTTTGCAGACAAAGCCATTGTTGCGCCACGCTCGCCCGAAGTCATTGATCTCGAAACCGAAAGCGAACCTGGTACTAGGGACAAACTTATCATTCCAAGCTTCAAGAAGCGAAAATTAGAAATCTTGCGCGAGGGTGGCCTCGAAGTAACGGCCGTTGATTTAGATGCACGACCAAGCGTAATACAACCAACGACAACCGCGTCAGCCAACGCAAACGTATCCTCGGCCACAACGACTACGAGTGCAAGTTCGTCCTCGACTATAGCATCAGCTTCTCCTTTGACGACTCCTACGATTGCATCTCCTATGAAGCAAGAAGATGGTAGATCTTCCATGAGTCCTGGTTTCGCGATGCCGCAAAGCGCAGTCATACCTAAATTGATAAATGTAACTGTAACGCCAGACATTGGGCATATGATGCCCAGAAATTCGGAGCACCCACAGCTACCGGTCACTCCGGTGAAAAACCAGTCGAACAATCAAGTCAACAGTGTTGTATCGCCAACGGGTCTCCAAACATCACCAGCTGTCAATAGCCGCGTTATCAATCTTGGCAATAACTCCAACAATGCCACGCTTCTGCAACTTTATGCCAACGCCAACGTACCCGTGCCACACTCGCTCGCAGCGACAGCAGCTCAAACAAACAATCATCGATTCGTTCCACCACCTTTACCGAATGGTCGATCATCAATGACATCTCATAAAGTCACGCAATCGAGATCGATATTCGGTAATAGTGAGAGAATGGTCTATGGCAATCCCAAGGACATTCTCGCTGCTCCTAAGTACATACCTGCGGTGGTTACGCCGCCACAAATGCCCAGAGCACCCAGTATTCTATCAGCGCCAAACGTTCGGTGTAGTAACAGTACTGCCAGTAACGTGGACGCTCATGCGTCAGGCGTTTTGGATCTTACACAAAAACCCACGGGTCCCAACGAGCGTCCAACCTATGGACGGCCAAACTTGGAGATAGTGAGGGTACCGGTAGTACCACGACCGACGCCCTTGAACCTCGAAACTCGTACTCATCATCCGTATGTCGATCATCAATCTCATCATCCACGTATAAGTGTAGCTTCGAATCTGTGCAAGGAAGTAAACAACAAGCCAACTGCACCATCTCAATCTGAACGTAAAAACCAATTTGTCACGGGTAGTGTTCCTCCGAGTCCCGTTGGATACACGAACGTTTTAGACAGTCGTACGATGACTACGAATAATCTCGAGATCACGTTGGTAAGCCCGAAGAAAACGGCTGGAAACGTCGTTGGAGCGCCACCGCTCAGCCCACCACCAAGAAACAACAACGCGGTTTCACCTACGATACCTGTACAGAGGAGACAACAACAGCAACAGCATTTGAATGGGAAATATCCTACTAGGCTACCAACCGAGCCAGTTTCACCGTACACTCCACGAAAGCCAGCTTCAACGAATAGTACTTCGAGTAATCATCATCCGATTATACCGAATATACCGAATTTGAGTCATTTGAACGCGGGATCATCGAGTTATGGAAAATCCAGTCATATTGGAAATTATCAAAATATGGCTATTGAAAAAAGGAGAGCTGCTGTTGAAGCTGCGAATAAGGAGCATCAACGACGAACAAGCGAAAGCGATAAAATGACGTTGCAACAGCAGCAACAACAGAGACTCGAAGCCAATTCGGCAGCGTTGTCAAAACAGCAACAATCGAGGGATGCTGAAATGTCACGTAGACATAGTGTACCCAGTTTGCCCACGGGTTTTATGCCGGCGATGCCTGCAAGTAGTCCGTCGCCGTACCTGGCGCATCAATTCGCCGCCGCTTCAGCGAGCAACGGGTCGTCATCGTCGTCGGCAGCCGCAGCCGCGGCAGCAGCCGCCGCAGCAGCCGGAAAATTCTTACCAATTCTCGACCCCATGTACTATTCGGCCTTCTACAATGGCTTGTTTTCTGGGCCTATGGGACCCGCGGGAGCGCCCAATCCCGCGGCCGCTGCCTTTCTGCAGCCCGAAATCAGCGCCTACTGTAAGGAATTACTTGCTTCGTCTTCGGCTCAACAGACAAGGCTAGCCATGGCAGCTGCAGCCGGTCAACAACACCAGCCCACCGCGCCTACGTCCAAGTAA
Protein Sequence
MLVLKLDRDKLIEPHKCDHDEVLTISEKVVVRVHDLVTWLSPSLEWSWGREVSYPPTPLSSPDSSPHPQVLSDPGIDFSDVERHQKDLDALTSSTRRSEPVNQTKVVVLSYPRYCRYRALLRRLEGSEPSWLCSSIAAALGGFKALPGTRVLFCRDTFDYPDLETHELLCNHLAPKLKGRPRRKRTKRSVSPAGESSNESEASVASSAAASTSKGSSSSSGQSSGRPSAASVARRSERKISPEEKKFLDDVYGFMSSRNTPISKMPLLGYRQIDLYLFYTKVHELGGYDKISANRLWKTIYDEMGGNTGSTSAATITRKHYERLLLPYERYLKGEETKVRPNQGGRRAKTPSTSDLSENSVEVKRETDSPPPPSVTPPPSEASNSTATPPPLQSILSTSPFLPGDKPGKTSSLRSVRVKPERLKSLNTIIATSNPAQSANQQQLPSSPTSLTTATSNTATSSSAASSPTSTPPASTTPTNPSAQHSVLERQLNSPLITQQVPPACSSPGLPVSTVAANATTVVTLTPPPEKDMKEIKLDPKQTSLLAQGKENIPLFEEKSTIFADKAIVAPRSPEVIDLETESEPGTRDKLIIPSFKKRKLEILREGGLEVTAVDLDARPSVIQPTTTASANANVSSATTTTSASSSSTIASASPLTTPTIASPMKQEDGRSSMSPGFAMPQSAVIPKLINVTVTPDIGHMMPRNSEHPQLPVTPVKNQSNNQVNSVVSPTGLQTSPAVNSRVINLGNNSNNATLLQLYANANVPVPHSLAATAAQTNNHRFVPPPLPNGRSSMTSHKVTQSRSIFGNSERMVYGNPKDILAAPKYIPAVVTPPQMPRAPSILSAPNVRCSNSTASNVDAHASGVLDLTQKPTGPNERPTYGRPNLEIVRVPVVPRPTPLNLETRTHHPYVDHQSHHPRISVASNLCKEVNNKPTAPSQSERKNQFVTGSVPPSPVGYTNVLDSRTMTTNNLEITLVSPKKTAGNVVGAPPLSPPPRNNNAVSPTIPVQRRQQQQQHLNGKYPTRLPTEPVSPYTPRKPASTNSTSSNHHPIIPNIPNLSHLNAGSSSYGKSSHIGNYQNMAIEKRRAAVEAANKEHQRRTSESDKMTLQQQQQQRLEANSAALSKQQQSRDAEMSRRHSVPSLPTGFMPAMPASSPSPYLAHQFAAASASNGSSSSSAAAAAAAAAAAAGKFLPILDPMYYSAFYNGLFSGPMGPAGAPNPAAAAFLQPEISAYCKELLASSSAQQTRLAMAAAAGQQHQPTAPTSK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01190109;
90% Identity
-
80% Identity
-