Abak000983.1
Basic Information
- Insect
- Apocrypta bakeri
- Gene Symbol
- PAF1
- Assembly
- GCA_018906985.1
- Location
- JACCIA010000002.1:7712448-7716087[+]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6 2.1e+03 -1.4 0.2 15 41 477 503 476 505 0.77 2 2 1.3e-12 1.1e-09 37.9 8.9 2 65 505 568 504 568 0.95
Sequence Information
- Coding Sequence
- ATGCCGCCAACTATCAAAAACGGACCCGCGGACAGCAAGCGCGGCGTGGCCAAGCCAACGGAGAAAAGATTGGAGCTCATATGCAAAGTCAAATATTGCAATTCTCTACCGGACATTGCTTTTGACCCCAAGTTTATTTCCTACCCTTTCGAATCTACAAGATTCATTCAATATAATCCAACATCATTAGAGCGTAATTATAAATATGAAGTTCTTACCGAACACGATTTGGGAGTACCAATCGAACTTATTAATAGAGATACTTATGCCTCCGATCCAAATGCTCCATATGAAATGGGTCCATTGGATGAAAAGTTTCTCGAAGAAGATATACTTGCTCCACAAGATTCAAAAAGATCGAGGCATCATGCCAGAAGTGTGTCCTGGCTTCGGCGTACCGAGTACATTTCAACGGAACAAACTCGTTTCCAACCGCAAACTACCTCGGATAAAGTGGAAGCTAAAGTTGGACACAATATTAAGAAACACTTTAAGGAAGAGACATTGTACATGGACCGTGATTCTCAAATTCGAGCTATTGAAAAGACATTTGAAGATAATAAGAAACCTATTGAAAGACATTACAGCAAACCAAATGTTGTACCTGTAGAAATACATCCAGTCTACCCAGACTTTAAGATATGGAAATATCCTTGTGCCCAAGTAATATTTGATTCTGATCCAGCACCAATGGGATTATCAGTACCAGCGCAAATCGAAGAAATGTCACAGGCTATGATTAGGGGTGTGATGGACGAAAGTGGAGAGCAATTCGTTGCCTACTTCTTACCTTTAGAAGAAACTTTGGAAAAGAGAAAGAGAGACTTTTGCTCTGGTATCGATTACGCAGAAGAAGACGAGTACGAATACAAAATGGCCAGAGAGTACAATTGGAACGTTAAGAGTAAAGCTTCTAAAGGTTACGAAGAGAACTATTTCTTGATTATGCGAGAAGATGGAGTTTATTACAACGAGTTGGAAACTCGAGTCAGACTGAGCAAACGTAGACAGAAAACGGGAGCACCCGTTAACAACACTAGATTGGTGGTACGTCACCGACCGCTCAATGCAAATGAATTCAAAATGCAAAGGTTGCGCGAGAAGCAGCTTGAGCCACCCTGCGAAGACGACGAAGACGAAGAAGATGAAGAAGACGAGGAAGAGGAAAAGGAAGTCGAGGTTCAAAAAATCGATACGCAGAATGACGACAAAGGCTCTGACACCGAAGGACAGGAGGAAAAGGATGGTAAACAAAACGACTCGCGTTCCTCGTCGCGAGCCTCCTCTCGTGCTTCATCCAGAGCTTCCTCTCGAGCATCTTCGAGGGCTTCTTCTCGTGCCTCATCTCAAGCCTCGTCACGCGCCACGTCTCGTGCTTCGAGTCGCAAGAGATCACCGGCTAAAACGGAGTCCGGTACTCCGGCTACATCACCGGCTAGATCAAAATCCAAATCAAGGAATAAAGAAAATAATGGAAACAAGAGGAAGAAGCAAATGTCGGAAGAGGACGACGACGAAGATTATAGGAAACGCAGAGATAGGAATAATCAGGCTGTTAAAAAATCCAGAGTTAAAAGCAAGATGCGTACGCAACAAACTTTAGAACGCGTTAATCAGCTGAAAATGGAGAACGAACTCTTGGAGGAAAAAATCAAAATGCTTAATAAAGAGTTAGGATTTCTCAAGGACTTGTTTCTAGCGCATGCTGGTTCAAATCAACATTCCTCAAACTTGCAAGACATTGATCTTAATGCACTTCTTGCCGATGATAGTAAGTCCGAAGATCCATTAAAGTCCTAA
- Protein Sequence
- MPPTIKNGPADSKRGVAKPTEKRLELICKVKYCNSLPDIAFDPKFISYPFESTRFIQYNPTSLERNYKYEVLTEHDLGVPIELINRDTYASDPNAPYEMGPLDEKFLEEDILAPQDSKRSRHHARSVSWLRRTEYISTEQTRFQPQTTSDKVEAKVGHNIKKHFKEETLYMDRDSQIRAIEKTFEDNKKPIERHYSKPNVVPVEIHPVYPDFKIWKYPCAQVIFDSDPAPMGLSVPAQIEEMSQAMIRGVMDESGEQFVAYFLPLEETLEKRKRDFCSGIDYAEEDEYEYKMAREYNWNVKSKASKGYEENYFLIMREDGVYYNELETRVRLSKRRQKTGAPVNNTRLVVRHRPLNANEFKMQRLREKQLEPPCEDDEDEEDEEDEEEEKEVEVQKIDTQNDDKGSDTEGQEEKDGKQNDSRSSSRASSRASSRASSRASSRASSRASSQASSRATSRASSRKRSPAKTESGTPATSPARSKSKSRNKENNGNKRKKQMSEEDDDEDYRKRRDRNNQAVKKSRVKSKMRTQQTLERVNQLKMENELLEEKIKMLNKELGFLKDLFLAHAGSNQHSSNLQDIDLNALLADDSKSEDPLKS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -