Ahis006315.2
Basic Information
- Insect
- Apocheima hispidaria
- Gene Symbol
- pnr
- Assembly
- GCA_947579745.1
- Location
- OX388156.1:4874560-4886580[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-17 5.6e-14 51.6 3.7 1 35 419 452 419 453 0.98
Sequence Information
- Coding Sequence
- ATGTTTGGAAGCACATTTTCCACAAAATTAGAAAGGGAGGTGCTGAGCGTCACGGCTGCGAAGTTGGAAGAGATAATAAAGCCACTGACCGATCGAGAATTCGACCGACTGTCGAAAAACAATTATGCGGAGGTCGGCTCGCCGGACTCTACCGAGGAGATGAAAAACTTAGAGAGTCGGCAGGCGGCCGTCACGTTACTGCAGATCAAAAATTACGACCCCAGTAAATATGCAGTAAAACCGGAGGAGGAGCCTCATATAATGTTCAACACCGGGTCAGGTTTACCGCCCTCGGACCGAGCGAGAGAGGTGATGCACTGCAATGCGGTCATCGATATTATAAGCAAGGCTGTGGCGGTCGCGCAACGGGAAAACGAGGACACGCAGAAGTACCCTCCGAGCTACACGAGCGTGATCGACAGGACGCCCGCGCAGACCGTCGGAGCAGAGCCGAGCTACGCCCACGACTACTCGGATGACAAATACGCGTACAGCACATCCCAGGCGGCGACCAGCCCTTGTAGCAACGACGAACATGACAAGGAGATGGATCTCTCGCTGTACGGGTCCGTCAAGAACGAGCCGGCGGAGCACGACGACAGGGAACAGAACTACTTCAGCCGGTCAACGCACAACTTTGCGGACGAATACAAGCACCAAGTTTTCTCCCGAGCGGCCAGTAAAGCGAAGGCGTCGAAGGACAGCTCTTCGGTATATGAAGACTGCAGTCAGAGTAGTAGCGGGTCGGACCCCGATCGGCTACAAATGGACATCTCTCAAATGTCGCAGGACGACCCAGAAGAGACGCAATCGGCACGATCCACGCAGTCGTCCCCACAACAACAGCCTCACCCTGAGCAAGAGTCAAAAGAATCACTCTGGCAGGCCCTTCACGGACAAAACGGTCGTAGCGGAGAAGCGACGCAGCTCCTTCGACGGTTGATCAACAGCAAACACCTCGGCATGACGGTGTCACCACTACGCGCGTCACCGTCGCCGTCGCCGCTGCCCGCGCCGCTTCAACAGCCAATCAACGGCTCCGTCTCACCAAACGGCGAATGGCAGAGCGGCGGCCGGTGCGGCGGCGCGGCGGGCACGGCGCGCAGGAAACAGAGCTTCCCTGCGCGCGCGCAGCCCCTGCCCGCGGCCGACGCCGCGCCCGCCGCGGCCTGGCCGCAACCCGCCTCGGAGAACCAGGAGCCATTAGAGGCGATATCGGGTGGCGGACGGTCGGGGCCGCGCGTCGAGCTAGCGTGCACCAACTGCGGCACGCACACTACTACCATCTGGCGGCGCGACGCGCGCGGGGAGATGGTGTGCAACGCGTGCGGGCTGTACTACAAGCTGCACGGAGTCCCGCGACCCACCGCCATGAGGCGCGACACCATACACACGCGCCGCCGCCGCCCGCGGCACGACGCCAAGCACGCCAGGAACAAGTCGCGGCGCAGCGGCGGAGGGAGCGGCGCGTGCCCGGCGCCGGACGGGGGCGGGGGCGGCGCGGAGGCGGCCGGGGGCGGGGGCGGGGGCGGCGCGCCCGAGGAGGCCGTACTCGCGGCGCTGCGGCGACAACTGCAGCCGCATCTACTGGCCGCCCTGCATGCGCATAACACTCGCACGCATCGCCCGCAGATGGGTGTGAACGCGCCGGCCGAATACGACGACGCGCCTCTCAACCTCGTCGCCAGCCACGTCGCGGCCGAGGAGACGCACTGA
- Protein Sequence
- MFGSTFSTKLEREVLSVTAAKLEEIIKPLTDREFDRLSKNNYAEVGSPDSTEEMKNLESRQAAVTLLQIKNYDPSKYAVKPEEEPHIMFNTGSGLPPSDRAREVMHCNAVIDIISKAVAVAQRENEDTQKYPPSYTSVIDRTPAQTVGAEPSYAHDYSDDKYAYSTSQAATSPCSNDEHDKEMDLSLYGSVKNEPAEHDDREQNYFSRSTHNFADEYKHQVFSRAASKAKASKDSSSVYEDCSQSSSGSDPDRLQMDISQMSQDDPEETQSARSTQSSPQQQPHPEQESKESLWQALHGQNGRSGEATQLLRRLINSKHLGMTVSPLRASPSPSPLPAPLQQPINGSVSPNGEWQSGGRCGGAAGTARRKQSFPARAQPLPAADAAPAAAWPQPASENQEPLEAISGGGRSGPRVELACTNCGTHTTTIWRRDARGEMVCNACGLYYKLHGVPRPTAMRRDTIHTRRRRPRHDAKHARNKSRRSGGGSGACPAPDGGGGGAEAAGGGGGGGAPEEAVLAALRRQLQPHLLAALHAHNTRTHRPQMGVNAPAEYDDAPLNLVASHVAAEETH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00818817; iTF_00206658; iTF_00207508; iTF_00034377; iTF_00827653; iTF_00033483; iTF_00390965; iTF_00045046; iTF_00667036; iTF_01208873; iTF_01209892; iTF_00914156; iTF_00056205; iTF_00125582; iTF_00826485; iTF_00635939; iTF_00896444; iTF_00635072; iTF_00927168; iTF_01172928;
- 90% Identity
- iTF_00033483; iTF_00034377; iTF_00045046;
- 80% Identity
- -