Ahis014999.1
Basic Information
- Insect
- Apocheima hispidaria
- Gene Symbol
- GATA-B
- Assembly
- GCA_947579745.1
- Location
- OX388146.1:228812-232382[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.6 3.3e+03 -2.0 0.2 12 20 98 106 97 107 0.88 2 3 4e-18 8.4e-15 54.3 3.5 1 34 130 162 130 164 0.97 3 3 1.8e-17 3.8e-14 52.2 4.7 1 34 199 231 199 233 0.98
Sequence Information
- Coding Sequence
- ATGTATTACAGCCTGTTAAAGGAGTCTATATTTGTAGGCGGTCGTGTCGCTGGTAGCGCGCAGCCGGCCGCCATGTTGAACGCATTACGCATTAAGTATGTAATCGGAAACTCGGCTATTAATCGAGTGGTATCAGTGGAGCTATGTTCCAGGCGCGACACATGGTCCTCGACGCGGCGGCGACGCGACGCCGACGCGACGGCGCTAGTTATTTATATTTTATTATTTGCACGCTGTGTCGTCGCGCCAGTCCACGACTCTTCCAAGCATCTCCTGGCTATAGAGGATGTGTGGCGGGACAGCCCTCGTTCGAACCGTCTGTCACCACCACCGGTGAACGAAGAACGCGCCGTCGAGATGGCGGAGTTGTTCACGGAGGGGCGCGAGTGCGTGAACTGCGGCGCCATCAGCACGCCGCTGTGGAGGCGCGACGGCACCGGCCACTACCTGTGCAACGCGTGCGGCCTCTACAACAAGATGAACGGCATGAACCGGCCGCTGAAGCAGCCTCGGCGGCTGGTACGTCAGCGGCACGCCGCGCACGCGCCGGCGGCGCCCCACCACGACATGGGCGCCAAGCGGCCGGGCACCACCTGCACCAACTGCATGACGGCCACGACGACGCTGTGGCGGCGCAACGCGCACGGCGAGTCTGTCTGCAACGCGTGCGGCCTCTACTTCAAGCTGCACGGCATCAACCGCCCGCCCTCCATGAAGAAGGACTCCATACAGACCCGGAAACGGAAATCTAAGAACAGCATTAAGACCGAGCGAGGCATGAAGAGCGCCGGACGCGCCTCCTCCGGGGGCGCACCCGTTACCTCCGCAGTCAAAATCGAGAACATGCTGGAGCTGGGGTCTGCGTCGGTGCGGTCGCCGCTACAGCTGGGCTACTACGTGCCGCACGGCGCGATGAAGCTCGAGTCACCGCCACCGGCGCACGCGCACGGGTCGCACACGTCGCACGGGTCGCACCCGTCGCATGGGACGCACGGGTCGCACGCGTCGCACCCGCACCTGCAGCACGCGCTCTACGCGCCGGAGGAGGCGGAGTACCGGGCACGGCTCGAGCCCCAGGACCGGCTCGAGCGGCCCACCGTCGTCTCCATGGGCAGCTGA
- Protein Sequence
- MYYSLLKESIFVGGRVAGSAQPAAMLNALRIKYVIGNSAINRVVSVELCSRRDTWSSTRRRRDADATALVIYILLFARCVVAPVHDSSKHLLAIEDVWRDSPRSNRLSPPPVNEERAVEMAELFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYNKMNGMNRPLKQPRRLVRQRHAAHAPAAPHHDMGAKRPGTTCTNCMTATTTLWRRNAHGESVCNACGLYFKLHGINRPPSMKKDSIQTRKRKSKNSIKTERGMKSAGRASSGGAPVTSAVKIENMLELGSASVRSPLQLGYYVPHGAMKLESPPPAHAHGSHTSHGSHPSHGTHGSHASHPHLQHALYAPEEAEYRARLEPQDRLERPTVVSMGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -