Ahis004427.1
Basic Information
- Insect
- Apocheima hispidaria
- Gene Symbol
- ZNF217
- Assembly
- GCA_947579745.1
- Location
- OX388155.1:1539010-1551005[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 4.5 2.8e+02 2.5 4.1 1 23 236 258 236 258 0.94 2 10 0.013 0.8 10.5 5.0 1 23 265 288 265 288 0.91 3 10 0.015 0.93 10.3 1.7 1 23 321 344 321 344 0.96 4 10 0.24 15 6.5 0.3 2 21 359 378 359 383 0.89 5 10 0.00094 0.059 14.1 1.1 3 23 393 413 393 414 0.96 6 10 0.00053 0.033 14.9 1.3 1 23 440 463 440 463 0.94 7 10 0.0036 0.23 12.2 2.6 3 23 480 500 478 500 0.94 8 10 2.4e-05 0.0015 19.1 1.7 1 23 506 528 506 528 0.98 9 10 2.2e-07 1.4e-05 25.5 1.8 2 23 534 555 534 555 0.97 10 10 0.00086 0.054 14.2 1.1 1 23 561 584 561 585 0.96
Sequence Information
- Coding Sequence
- ATGCGCTTGGGAAAAATTGGTGTTGCATATCACACATTTGTATGGTTTCTCGCCATTATGAATACGGAGGATAAAGCACCAGTTGACGAGCTGTATCAAAAACTTCCACCATTCAAATTCACAAGCAACAAGAAAACTACATCGAAAGCAACAACAGAAAGTATAGAAGCTATAGAAATCAAAAATGAAACACCTGTAAACGACATCATCCAAAATGAAGCTAAAACAGAAGGCGATGAGATGAAGATGAATGTCAAAAATGACAATTATCAAAACTATGATCATCAAAATCACCTTGATTACAATGACGACGACAACGATCCTCAAAATTTTAATAGCAATGATCATCAACATTATAATGGGTATGATGATCAAAATAATCATAATGATGACCATCAAAACGATGACGATGTTGATCACCAAAATGAAGACGATGACGACAAATATCTAAGCGAGTTTTTGAATACATTCAAAGTGGAAAAAGAACAGAAAAAAGCTAAAAGTAAAAATAACACTCTGATTAAAAATGAAGTTGATGTAGAAGAAACAGATGAACCAAAAACAAAACGGAAACGCGCGCGCAAGCCCCTAACTAATCAACAGGAATACGAAACAGTATTCGACATACAGTTATTCCATTCAGAGGCTGAAGTTATGCAAGAATTCGAACAGCGGAAGCATTCTGAGAGATACATAGCTGCAGCTTACAAATGTACTGTATGCTTTACTGTGTATAAGTGTCAGAAACTTCTGGATTTTCATATGAGATGGCATGATCCGTCGGCAGGTGATTTTTCCTGCCACATCTGCCACATGCGTTTCAAGCGCTACATGTCAGTTCGCAAACACAGTAACGATGTACACTACGGATTATTCAAATGCAAGCGATGCCCGCTCGTCACATATCACAAACACAGCTCGACTTACATGACGCACCTGCGCACGCGCCACCGCTCCGAGCACGTGTGCGTCACGTGCGCGCGCACGTTCGTTTCGCACGCAGGATTACTCGTTCATAGGAAGAAAATGCACAAGCTTACATCCGTGCACGACAGCACGAGCACGGGCGGCGCAACCTGCACGGAGTGTAAGCTGACGTTCGCTTCACACGCTGTCTACATTGTGCACGTACTCTCCACTCCCAAGCATAAGGACCTCGCTGCTACCATCATAGGTTGCCCAGAATGCGGGGCCCAGTTCGAGAACAAGCTGCAAGTGCGCGCGCACCGGCGCAAGCACCACCCGTCCTACAACTACTCCGCCATGAAACACGCTGAGAAGAACTTACTGAACGGCCGGCGGGAGGACGAGAGAGTGTTCGACTGTACCATGTGCGGTAAATCCGGCACTCACAATACGTGGCTGTACCGGCACTACCAGGCCGAGCACCCCCACGTGCCCTACGAGCAGGTGTACAACGAGCGCCGCAAGCATCTCTGCGACGAGTGCGGTCGGAGCTTCTTCACGATAACGGCTCTCCGCGAGCACAAGCACATCCACACGGGGGCGAAGCCGTACTCGTGCGACAAGTGTCCGGCCAAGTTCCGGCGGAAGACGAGCCTGAAGATGCACCTGGAGCGCCACCTGCCGCCGTCGCGGGAGTGCCAGCACTGCGGGAAGAAGTTCGTGAGCGCCTCCAACCTCAGCAACCACATCAGGTCGCACACCGGCGAGCGTCGATACAAATGCTCGATATGCGGGAAAGGATTCCTGCACAGCGCGGCCATGAAGGAACACGTCAGAGGCGTCCATCATCACATACGACGTGCCAGAAAACAACACAACATACAATAA
- Protein Sequence
- MRLGKIGVAYHTFVWFLAIMNTEDKAPVDELYQKLPPFKFTSNKKTTSKATTESIEAIEIKNETPVNDIIQNEAKTEGDEMKMNVKNDNYQNYDHQNHLDYNDDDNDPQNFNSNDHQHYNGYDDQNNHNDDHQNDDDVDHQNEDDDDKYLSEFLNTFKVEKEQKKAKSKNNTLIKNEVDVEETDEPKTKRKRARKPLTNQQEYETVFDIQLFHSEAEVMQEFEQRKHSERYIAAAYKCTVCFTVYKCQKLLDFHMRWHDPSAGDFSCHICHMRFKRYMSVRKHSNDVHYGLFKCKRCPLVTYHKHSSTYMTHLRTRHRSEHVCVTCARTFVSHAGLLVHRKKMHKLTSVHDSTSTGGATCTECKLTFASHAVYIVHVLSTPKHKDLAATIIGCPECGAQFENKLQVRAHRRKHHPSYNYSAMKHAEKNLLNGRREDERVFDCTMCGKSGTHNTWLYRHYQAEHPHVPYEQVYNERRKHLCDECGRSFFTITALREHKHIHTGAKPYSCDKCPAKFRRKTSLKMHLERHLPPSRECQHCGKKFVSASNLSNHIRSHTGERRYKCSICGKGFLHSAAMKEHVRGVHHHIRRARKQHNIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00034193;
- 90% Identity
- -
- 80% Identity
- -