Basic Information

Insect: Apocheima hispidaria
Gene Symbol: -
Assembly: GCA_947579745.1
Location: OX388155.1:1083505-1107171[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.00077 0.048 14.3 2.7 1 23 256 279 256 279 0.97

2 15 2.6 1.7e+02 3.2 0.1 1 15 309 323 309 323 0.90

3 15 9 5.7e+02 1.5 0.0 2 20 382 400 381 404 0.81

4 15 0.00072 0.045 14.4 3.9 3 23 448 468 446 468 0.95

5 15 0.00031 0.02 15.6 0.6 1 23 474 496 474 496 0.98

6 15 0.0012 0.078 13.7 0.1 2 21 502 521 501 522 0.93

7 15 0.00049 0.031 14.9 4.2 1 23 817 840 817 840 0.97

8 15 0.081 5.1 8.0 2.6 1 23 870 892 870 892 0.95

9 15 0.01 0.65 10.8 2.3 1 23 897 920 897 920 0.93

10 15 0.067 4.2 8.2 0.0 2 20 926 944 926 946 0.92

11 15 0.055 3.4 8.5 1.8 1 23 1034 1057 1034 1057 0.96

12 15 0.00037 0.023 15.3 0.2 3 23 1074 1094 1072 1094 0.96

13 15 0.0018 0.11 13.2 0.4 1 23 1100 1122 1100 1122 0.97

14 15 5.2e-06 0.00033 21.2 3.5 2 23 1128 1149 1127 1149 0.97

15 15 0.00086 0.054 14.2 0.1 1 23 1155 1178 1155 1178 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.00077	0.048	14.3	2.7	1	23	256	279	256	279	0.97
2	15	2.6	1.7e+02	3.2	0.1	1	15	309	323	309	323	0.90
3	15	9	5.7e+02	1.5	0.0	2	20	382	400	381	404	0.81
4	15	0.00072	0.045	14.4	3.9	3	23	448	468	446	468	0.95
5	15	0.00031	0.02	15.6	0.6	1	23	474	496	474	496	0.98
6	15	0.0012	0.078	13.7	0.1	2	21	502	521	501	522	0.93
7	15	0.00049	0.031	14.9	4.2	1	23	817	840	817	840	0.97
8	15	0.081	5.1	8.0	2.6	1	23	870	892	870	892	0.95
9	15	0.01	0.65	10.8	2.3	1	23	897	920	897	920	0.93
10	15	0.067	4.2	8.2	0.0	2	20	926	944	926	946	0.92
11	15	0.055	3.4	8.5	1.8	1	23	1034	1057	1034	1057	0.96
12	15	0.00037	0.023	15.3	0.2	3	23	1074	1094	1072	1094	0.96
13	15	0.0018	0.11	13.2	0.4	1	23	1100	1122	1100	1122	0.97
14	15	5.2e-06	0.00033	21.2	3.5	2	23	1128	1149	1127	1149	0.97
15	15	0.00086	0.054	14.2	0.1	1	23	1155	1178	1155	1178	0.96

Sequence Information

Coding Sequence: ATGACAAGAAGTTCTAAAAAGCAGCCAATAAATCTTCTCTACACACTGCTCCCGCCCTCAACCCTCGGTATGTGGTCACCAAACCCTAAGATCGGCACTGTTGTCATTCAATCAACCGACTCACAGACAGATCTGTGTGTTGAAGAAGAATTGCTAAAAGACGAATACACCAAAGAAGTCAAGTTGGAGGTAGACCAAAACAGCAACGAAAATATCAATGATATAATTGATGATCTTAAAACTGAGGATAACTCTAAAAACGTTTCCGATTCAGAACAAATAGATGAAATAAGCAATGATAGTGGAACAGAAAAAGATTTACTTCTAGAAAAGCTTGAAAAAATTTTGGAAGACGATTCCGATGAAAGTGTAGATCTTAACGTCCCCAAAGAAAGCGAAAAAATAAAAGCAAAAGTAATGCCAAAAAAACTTAGTAAAAAAATTGCTCTAAACATTGATGAAATAAGCAAAGATAGCGAAACACATTTACTTATAGAAAAAGTTGAAAAATTTCTGGAGGATGATTCCGACGAGAGTACAGAATTAAACGTCACCAAAGTTGAGAACAGCGAAAAAATTAAAGCAAAACTCAAGCCACAAAATTCTCGTAAAAAAATGACTCCAAAAAGTACAGTGAATGACAAAGTCAAAGAAGACGATAACAAATATAGGTCAGTGTTCGAGATAGAGTATCTAACTACACCCGAGATGAAGGTGGAAGAGTTTGAAAGAAGGAAGACGTATGAGTGTTACGTGACGGCTGAGCACAAATGTGAGATCTGCTACCAAGTGTTCAAAAGTTCCAAATTTTTGGAATATCATATAAACAAATGGCATAATGAAAGTCCAGGTAGCACCCTCTGCCCTATCTGCAAGACCTGGAACTCTGCGAGAAGCAGCCATAAACTCAGCCACCTAGTTGTGTTTAAGTGCAAGCTCTGTCCTCTTGTTACACCCCGCAGGAGTCAATCCGCATACTACGCCCATAATGGCAGGTTTCACCGACGAGGACGAAATGTTTGCGAGTGTTGCGGCCGCGGGTTCCTGTCACCTTTAGGACTGAAAATACACAAGAATAACTCGACTCGCTGCACTGTGTCGACAGAACCGAGTACTTTCCAGACGGAACCGACAGAGGGCGTGCGATGTGACGAGTGTGACGTCACACTACCCTCGCAAGAGGTGTACGATGCGCACGTTTACGACGTGCACGACCCGCCGAGGGGGAGTGGGGACAGCACCGGCCTGCCCGGAATCAGAATGTGGTTGCAACAACACTTCAGGAGGGAACATCCCAATGAAGACATAGACGTATTCTACGCGGACAAGAAAACACATCTTTGCGATATCTGCGGCACAGGATTTACCAATATCTACCACCTCCGCGACCACATGCACCTCCACACGGGCGCGCGGCCGTACGCCTGCGACCTGTGCCCGAAGCGGTTCCGGAGCGCCTTGCAGGTGCGGGAGCACCGGCGGAGGCACTTCCCGTCTGCTATACCCTGTGCTTACTGCGATAAGCTGTTCAAGACGACCTCCAACCTCTCCAGCCATGTGAAGTTACTCGTAGCTAAAACATTCTACTGCAGTGAATGCGAGTATCTTTTGACGAAATTCTACAAATTCAAACAAAAATGTATGAAGGCGTCCGAGGTATATAGAGACTGGATGTCCGAAGACATAAAAGTTCCAATACAAGATCTACACAAACTGCTGCCTCCATCATCACTCGGGCTGTGGAAACCAAACCATAAGATGGTTCCCAAAGTGTGCTTACCAGTCGCAGAAAAAACGCAGCCCAAAACGCGTACTGAAAAACTGAATGTGATTACCACTTTGCAAGAGTTGATAAAAAATTCTTACATTGAAAAACCAAAAGTAGTATATGTCCCAACAAAGAACAAGTTAATTCACAATAAACAAAATGATCAATTAGATGTTGAAGAGAATAATAATAGTGGTGCAGAAGAACATTTTGTTGAAGAGTATTTAGATTTTAACATGATTGTCGGTGAAAATGATGACGATGAACCAAACAAATCTAAGAAAGGCCAAGAAACGACATGCAAGAAAGAAGTATTACGGATTGACAGGTTGGAAGACGAATTGGCTCGAAAGTTGTCACAGTTCGGAGACGTCAGAACAGACGACGGCGTCGCCATAAACAAGGAATTGATAACGAAATTAATGCTACATAAAGCAGGAGGACCTGTAATAAGCGGTCTATGGAAAGCTACGTGCCTGGATGACATATTAGACTTATTACCAGTTATAGAAACGACACTGACTACCATAACCACCACGACTACCATAAATAATGATGATAAAAACAAAAAAGAAGTTGACTACAGTTCAGTGTTCGATATAGAGTATCTAACGACCCCCGAGATGAAGGTGGAAGAGTTTGAAAGAAGGAAGACGTATGAGTGTTACTTGCAAGCTGAGCACAAGTGTGAGATCTGCTACCAAGTGTTCAAGAGTTCCAAATTTCTGAAGTATCACATGAACAAATGGCATGTTGAAAGTCCAGGCTGCGTCCTCTGCCCCATATGCAATACATGGAACCCTAAACAGGGCAGTCATAGGGTCACCCACACTGCGGTGTATAAGTGCAAGCTCTGCCCCCTCGTCACGTACCACAGAGACTCGATGCAAAATCATTTCGAGCAGCACACAGGCAAGACACACCGCTGCGAAAAATGCAATATTACATACAAGAGTAGATCAGCGTACCTCACCCACGTGGGTAAGAATCACCGACAAGGCAGAAACGTCTGCGAGCGGTGCGGCCGCGGGTTCGTCTCCCCGCTCGGGCTGCGGCTGCACAGGCTCAACTCGTCCCGGTGCACGGCGCCGGGGCCGGGGCCGGCGCCGGGGCCGGGGCCGGCGCCGGCACACGCCGCGCCCGGCGTGCGGTGCGACGACTGTGACGTCACGCTGCTGTCGCGGGAGGTGTACGACGCGCATGTTGTCGACGTGCATACGCCAAAGCGCTTCGGCGGGCAGCGCCTCAAAATCAACAGCGACGGTCTACCAGAATTCAGGAGGTTGAACAGTCACTCGCAAAAGTCGCGCAGTCGATTCACGCTCGCAAAACACACGTGTAGAGTGTGCAACAAAGTCGGAACTAATTTCGGCTGGCTACGTCTGCACTTCAAGAGGGAGCATCCCAATGATGAAATCGAGAGTCTGTACGCGGACAGGAAACCACATCTGTGCGACATCTGCGGAGCTGGATTTAGTAAAGTGTACGCGCTTCGTGATCACATGAACGTACACACAGGCGTGCGACCGTACGCCTGCGATTTGTGCCCGAAGCGGTTCCGAAACGCAAACGTGATGAAGGAGCATCGGCTGAGGCACTTCCCCTCCACCTTGTCCTGCACCTTCTGCGGGAAGCAGTTCAAGACTAAGGCGAATCTCCACACGCATATGAAGGTACACAATGGCGAACGCATCTACAAATGCGATATCTGTGGAAAAGGATTCCTGCTTAGCGCAACACTAAACGAACACATACGAGGGGTGCATTACAATGTACGGCGCGTCAAAAAGAGAAAAAACGAGACAGAACTGGGAGAGAAAAGGGTAGAGCAACAAATAAAAAAGACAAAAATCGACGAAATTGATGCAATTGAGACCAATGAATACGTCGAGCCAGAAGAAATAGAGATAGAGACAGTAGAAATGGTGATTGATACTGAAGACATTGATAATGAAACGGATACCTGTCAGGACAGCGATACAGAATTTTTAGAGACATGTGAGGTCGCCGAAACGGAAACAATAGAGACCTGTGAGATCGATGAGACAGAAACAATGGAGACCTGTGAGGTCGATGAGACGGAAACAAACGAGGCCTGTGAGATCGATGAGACAGAAACAATAGAGACCTGTGAGATCGATGAGACAGAAACAATAGAGACCTGTGACATCGATGAGGCAGAAACAATAGAGACCTGTGAGGTTAGCGACACAATAACAATAAAGACAAATGAGACTAAGATGCTGACGAAAAAAGAGAAAAAGCCTTTTAGGGTTGTAATCTTAAAGGGAAGACTTTAA
Protein Sequence: MTRSSKKQPINLLYTLLPPSTLGMWSPNPKIGTVVIQSTDSQTDLCVEEELLKDEYTKEVKLEVDQNSNENINDIIDDLKTEDNSKNVSDSEQIDEISNDSGTEKDLLLEKLEKILEDDSDESVDLNVPKESEKIKAKVMPKKLSKKIALNIDEISKDSETHLLIEKVEKFLEDDSDESTELNVTKVENSEKIKAKLKPQNSRKKMTPKSTVNDKVKEDDNKYRSVFEIEYLTTPEMKVEEFERRKTYECYVTAEHKCEICYQVFKSSKFLEYHINKWHNESPGSTLCPICKTWNSARSSHKLSHLVVFKCKLCPLVTPRRSQSAYYAHNGRFHRRGRNVCECCGRGFLSPLGLKIHKNNSTRCTVSTEPSTFQTEPTEGVRCDECDVTLPSQEVYDAHVYDVHDPPRGSGDSTGLPGIRMWLQQHFRREHPNEDIDVFYADKKTHLCDICGTGFTNIYHLRDHMHLHTGARPYACDLCPKRFRSALQVREHRRRHFPSAIPCAYCDKLFKTTSNLSSHVKLLVAKTFYCSECEYLLTKFYKFKQKCMKASEVYRDWMSEDIKVPIQDLHKLLPPSSLGLWKPNHKMVPKVCLPVAEKTQPKTRTEKLNVITTLQELIKNSYIEKPKVVYVPTKNKLIHNKQNDQLDVEENNNSGAEEHFVEEYLDFNMIVGENDDDEPNKSKKGQETTCKKEVLRIDRLEDELARKLSQFGDVRTDDGVAINKELITKLMLHKAGGPVISGLWKATCLDDILDLLPVIETTLTTITTTTTINNDDKNKKEVDYSSVFDIEYLTTPEMKVEEFERRKTYECYLQAEHKCEICYQVFKSSKFLKYHMNKWHVESPGCVLCPICNTWNPKQGSHRVTHTAVYKCKLCPLVTYHRDSMQNHFEQHTGKTHRCEKCNITYKSRSAYLTHVGKNHRQGRNVCERCGRGFVSPLGLRLHRLNSSRCTAPGPGPAPGPGPAPAHAAPGVRCDDCDVTLLSREVYDAHVVDVHTPKRFGGQRLKINSDGLPEFRRLNSHSQKSRSRFTLAKHTCRVCNKVGTNFGWLRLHFKREHPNDEIESLYADRKPHLCDICGAGFSKVYALRDHMNVHTGVRPYACDLCPKRFRNANVMKEHRLRHFPSTLSCTFCGKQFKTKANLHTHMKVHNGERIYKCDICGKGFLLSATLNEHIRGVHYNVRRVKKRKNETELGEKRVEQQIKKTKIDEIDAIETNEYVEPEEIEIETVEMVIDTEDIDNETDTCQDSDTEFLETCEVAETETIETCEIDETETMETCEVDETETNEACEIDETETIETCEIDETETIETCDIDEAETIETCEVSDTITIKTNETKMLTKKEKKPFRVVILKGRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -