Basic Information

Insect: Apocheima hispidaria
Gene Symbol: -
Assembly: GCA_947579745.1
Location: OX388172.1:3013963-3019914[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.19 12 6.8 1.4 2 23 337 359 336 359 0.91

2 11 0.0022 0.14 12.9 0.5 1 23 365 387 365 387 0.97

3 11 0.26 16 6.4 3.2 1 23 394 416 394 416 0.94

4 11 0.018 1.2 10.0 0.3 1 23 422 444 422 444 0.94

5 11 0.06 3.8 8.4 0.2 2 23 450 470 449 470 0.96

6 11 0.00034 0.021 15.5 1.0 2 23 477 498 476 498 0.96

7 11 1.9e-05 0.0012 19.4 0.5 1 23 504 526 504 526 0.99

8 11 0.00011 0.0067 17.0 3.2 1 23 532 554 532 554 0.98

9 11 2.5e-06 0.00015 22.2 2.0 1 23 563 585 563 585 0.97

10 11 0.04 2.5 8.9 4.3 1 23 591 614 591 614 0.97

11 11 0.018 1.1 10.0 0.3 6 21 625 640 620 645 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.19	12	6.8	1.4	2	23	337	359	336	359	0.91
2	11	0.0022	0.14	12.9	0.5	1	23	365	387	365	387	0.97
3	11	0.26	16	6.4	3.2	1	23	394	416	394	416	0.94
4	11	0.018	1.2	10.0	0.3	1	23	422	444	422	444	0.94
5	11	0.06	3.8	8.4	0.2	2	23	450	470	449	470	0.96
6	11	0.00034	0.021	15.5	1.0	2	23	477	498	476	498	0.96
7	11	1.9e-05	0.0012	19.4	0.5	1	23	504	526	504	526	0.99
8	11	0.00011	0.0067	17.0	3.2	1	23	532	554	532	554	0.98
9	11	2.5e-06	0.00015	22.2	2.0	1	23	563	585	563	585	0.97
10	11	0.04	2.5	8.9	4.3	1	23	591	614	591	614	0.97
11	11	0.018	1.1	10.0	0.3	6	21	625	640	620	645	0.85

Sequence Information

Coding Sequence: ATGGAAGCACCAAATATCAAACTTGGACTGCAAGTGGAGGATATAAATGCGGTTTCTGACATTGAAGGTTCATTAAATACTCCTAAAAATCAGGAAAAACCACAAGATTCGAGTGAAAATGCAACTTTACCCGAGAGTAAAACACAGGATTCGAATGACCATGCAAGTTTGCCCGAGACTCAAACACAGGATTCGAATGACCATGCAAGTTTACCCGAGACTCAAACACAGGATTCGAATGACCATGCAAGTTTGCCCAAGACTCAAACACAGGATTCGAAAGACCATGCAACTCTATCTGAGACTCAAACACAAGATTCGAATGACCATGCAACTCTACCTGAGACTCAAACACAAGATTCGAATGACCATGCAACTTTACCTGAGAGTCAAACACAGGATTCGAATGACCATGCAATTTTACCCGAGACTCAAAAACAGTATTCGAATGATCATTCAACTCTACTCGTGACTCAAACACAGAATTCGAATGACAATACAACTCTACCTGAGACTCAAACACAAGATTTGAATGACCATGCAACTTTACTCAAGACACATGATAAAAAAGTGTCAAATCGCCTAGACTCAAGTCCTGTTGTTACGAAGAAGAAACGTAACACTGAAATAGAGTTAGACTTATCATTGATTAAAACCGAGCCAAGAAAAAGAAGTGCGTTGGTGGTAACATATGATTCGAAGATGGAAGAATTGGAGATAAAATCAGAGCTGAAATACGAGGGTGAAAACCGTATCCCTATTACTCCTGAAAAGTCAGAATCCCCGAATGATCCAGACAATGAACAGGAGATACGCGAAGTTCCTGTCAAGAAGAAAAAACCTAAAATGGAAATTGAGCTAGATTTTTCATTAGTTAAAAACGAGTATTACAAGCCAAGGGAAAGGCGTGCGGTGAAGAGATATGACGATATATTACTGCAGAAGTCTGAAAACAAAAGAAAAGAAATGAACTACGAGAAAAATGATAAAATAAACGATGAAGAATTGGTCTGTGAGATCTGCAACCAACTATTCCAGGAGTTGAAGTCCTTGAAAACCCACAGACACGCCAAGCACTTCAAAGTTTCAAAATTCACCTGTGCATTATGCTCCTCAACTTTCGACTCAAACACAGAACTCATAAAACATAAATTAGTACACAAAGATGAAGACAGAAACTTCTTGTGCATGAAGTGTAAAACTGCATTTACAGATCATTTGGAATACTTAAAGCACAAAGCGAAACATCAAAAGAGCTCGAATTACTACTGTATTGAATGTGGAAAAGAATTTGACTACAGAAACGGTTACAATTTACACATAGAACAACATTATTATAGAATGGTTGAGTGTGATGTATGTCAACGTACATACAATTGGAATAGAATAAAAGATCACATGAACGTTCACAAAGGGAGTACGAAACTCAAGTGTGTGGAATGTGGTAAGGAATATGATAGTAAGAAAAGTATGCGGTACCACATGACCTCCCACACCGGAGTGAAGCCATATCAATGCCTTTATTGTGGTAAAGGTTTCGGTAGCCAATCGCAGAGGGAAATACACACAAGAATACACACTGGAGAGAAACCGTACAAATGCAAAGTATGCTATCGTAGATTTGCACAACATACAGATATGATCCGTCATATGGAAAGTCATAATGCAGCGGGCTCCGAAAATACATTTGACTGCGAGGTCTGCGGTAAAAATTTCAAACACAAAGAATCTTTGAAGTACCATATGGATATACATAACAACACTCAGAAGTATGCTTGTAAGCTTTGCGATTATAAAACTCATACGCACACAGGTTTGAGATCTCACATCATGAGAAACCATACGGAAGGAAAGAAATACAAATGCATACCATGCGAAATAGCTTTCAAAACACCATCGGACCTAAAAAAACATGAGAAATTAAAGAAGCACTTGAATAACCTATATGGGTATGAAAAAAAAATTAAGAAATAG
Protein Sequence: MEAPNIKLGLQVEDINAVSDIEGSLNTPKNQEKPQDSSENATLPESKTQDSNDHASLPETQTQDSNDHASLPETQTQDSNDHASLPKTQTQDSKDHATLSETQTQDSNDHATLPETQTQDSNDHATLPESQTQDSNDHAILPETQKQYSNDHSTLLVTQTQNSNDNTTLPETQTQDLNDHATLLKTHDKKVSNRLDSSPVVTKKKRNTEIELDLSLIKTEPRKRSALVVTYDSKMEELEIKSELKYEGENRIPITPEKSESPNDPDNEQEIREVPVKKKKPKMEIELDFSLVKNEYYKPRERRAVKRYDDILLQKSENKRKEMNYEKNDKINDEELVCEICNQLFQELKSLKTHRHAKHFKVSKFTCALCSSTFDSNTELIKHKLVHKDEDRNFLCMKCKTAFTDHLEYLKHKAKHQKSSNYYCIECGKEFDYRNGYNLHIEQHYYRMVECDVCQRTYNWNRIKDHMNVHKGSTKLKCVECGKEYDSKKSMRYHMTSHTGVKPYQCLYCGKGFGSQSQREIHTRIHTGEKPYKCKVCYRRFAQHTDMIRHMESHNAAGSENTFDCEVCGKNFKHKESLKYHMDIHNNTQKYACKLCDYKTHTHTGLRSHIMRNHTEGKKYKCIPCEIAFKTPSDLKKHEKLKKHLNNLYGYEKKIKK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -