Ahis015102.1
Basic Information
- Insect
- Apocheima hispidaria
- Gene Symbol
- -
- Assembly
- GCA_947579745.1
- Location
- OX388146.1:2804892-2814183[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 27 0.00062 0.039 14.6 1.5 2 23 207 229 206 229 0.96 2 27 0.0017 0.1 13.3 0.6 2 21 265 284 264 285 0.92 3 27 0.0001 0.0065 17.1 0.4 2 23 322 344 322 344 0.97 4 27 0.0002 0.012 16.2 0.3 1 23 407 430 407 430 0.97 5 27 0.014 0.87 10.4 0.1 1 23 446 468 446 468 0.96 6 27 0.0024 0.15 12.8 1.8 2 23 511 532 510 532 0.95 7 27 9.9e-05 0.0062 17.1 3.4 2 23 574 596 573 596 0.97 8 27 0.0002 0.013 16.2 1.3 1 23 646 669 646 669 0.97 9 27 0.0013 0.083 13.6 0.2 1 23 726 748 726 748 0.97 10 27 0.0033 0.2 12.4 7.3 1 23 759 781 759 781 0.98 11 27 0.029 1.8 9.4 1.1 2 23 793 814 792 814 0.96 12 27 0.0067 0.42 11.4 1.1 1 23 824 846 824 846 0.98 13 27 0.042 2.6 8.9 2.8 1 23 873 895 873 895 0.97 14 27 0.0002 0.013 16.2 3.2 1 23 906 928 906 928 0.97 15 27 2.3e-06 0.00014 22.3 0.7 1 23 936 958 936 958 0.98 16 27 0.0026 0.16 12.7 0.2 2 23 978 1000 977 1000 0.97 17 27 0.16 10 7.0 0.3 1 23 1018 1040 1018 1040 0.96 18 27 0.67 42 5.1 2.1 1 23 1047 1069 1047 1069 0.94 19 27 0.023 1.5 9.7 0.5 2 23 1080 1102 1079 1102 0.95 20 27 0.0057 0.36 11.6 0.2 2 23 1125 1146 1124 1146 0.95 21 27 0.096 6.1 7.7 0.2 2 23 1227 1248 1227 1248 0.92 22 27 0.096 6.1 7.7 1.1 5 23 1258 1276 1256 1276 0.92 23 27 0.53 33 5.4 0.7 2 23 1287 1309 1286 1309 0.95 24 27 0.054 3.4 8.5 0.5 2 21 1326 1342 1326 1344 0.73 25 27 0.44 28 5.6 1.9 2 23 1417 1438 1416 1438 0.93 26 27 0.0087 0.54 11.0 0.7 2 23 1449 1471 1448 1471 0.95 27 27 0.46 29 5.6 1.2 2 20 1509 1527 1509 1529 0.93
Sequence Information
- Coding Sequence
- ATGGCCCTCAAACTCGGTAAATGCAGATTATGTCTCAAGCTCGGTGATTTTTACTCGATTTTTACGGTCGACAATGCCGTACAACTCGCCGAGATGGTTATGGATTGCGCGAGGATAAAAGTATATGAAGGAGATGGTTTACCAGATAAAGTGTGTGCCGAATGCATACAAAAGCTCAGCAGCGCCTACATATTCAAACAGCAGTGTGAGAGAGCTGATCAAGAGTTACGGAGGAACTATGTCCCACCTCCAGGCTTCAGTATCAGTCCGCCACCTCCGAATAGGCAAAGTAGCGATTCGGCATTTTCAACACACACAGACAGCTCTAACATAAAGACGACTTTCATAGAAAGCAAAGTAACACCAGTCAAAAGAAATAGAAAGAGAAGCGTCGAAAGCGATAATGCATCTGAAGCGAGCCGGTCCCAGGACTACGGCCGTCCCAGCAGCTCCAAACGCGTGGAGGAGCTCCGTAGGACGCAAAAAAGACCACGACTATCCGCCAATAACTCCAACAACTCACAGTGTGATTCGGATTACGAAGACAACGGAGGGTCCAGCTACATCCCAGAGACGGATAACGATTCTGACGAACCGCTCATCAAGCCCGACGAGAACAAGTGCGATATCTGCAGCAAATCTTTCCGATGGAGAAAGAGTTTAAAGGTCCATATGAAGAACATTCACGGAATAAAAGACAGTTTTGATGCAATCGTCGCTGACAATTCTGTCACAGCCGTCAGCACACCTAAAAAACCTACCGACACGTCATTCGACGATGAAGAGAAGCTGAGTTGCTCTCGATGCGACAAAACCTTTAAGCTGAAGATTATGTTAAAGAGACACTTAGAATCGTGCACGGGAAAGTCGCCGGTGAAATCACCTATAAAGTCACCGCAGAAAGAGCTGTTTATATCCTTGGAACCGATCGACGCCGTACACAAGATCACGGTTAAGAAACCCACCTGCGAGTACTGCACGGCCAAATTCAAAACTGTTGAAAATCTGGAGAAACATCTCAGAATTGTGCATGCGGCTGTTTTGAAGAAAGAGATCGATGCGAAAGTGGCGAAGGGCGGTCCGAAGCCGGGTCTGCAATTTAAGGCGGGCTCCAACGTGTTCACCATTCCATGCATCTACTGTGAGAAGCCATTCGATGATTACTACGTTCACCAGTCTCACTTCACCACGTGTCCAAAAAAGGACATGCGCTCTGTTTTCGAATGTCCGATCTGTCAGAAGGTGTCGAGCCGGAAAAATGGCTACTTTATCCACATAAAGAGCATCCACTTCGAGCCTCGAGCGTGCAAGGCCGAGGACCCGTCGGAGTCTTCCTTCGAGTGCCGGATCTGTAGTAAGAAACTGGTCTCGCAGGAAATGCTTGTGACGCATTTAGCAGCTCACGCGTCGAACATAGACGACGACAACGACGACACCGCACACGACGATGGCGATTCGAGACCGAGCACGTTTGAAGATTCTGCATCCGTGCACTCCGCTCACAGCACGCCGGCTCCCGGCGGCTCACTCAAATGCCGCACCTGCGACAAGGAGTTCAAGTACCGCAAGTCTCTCGTTACTCACGAAGCGAAACACACCGAAGACGAAGTGAGAGTGAAGAACGAACCCCCCGACAAGACGTCGATGAGTTTACTGAGCGAGACCCACCGGGAGTCTGATTTTGAATCTAGTCAAGACGACGACGAGTCGGACGACCTCACCTGCGACATCTGTGAGAAAATGTTTTCCTACAAGCGCCTGCTCGAGCACCACAAGAGAACGAAGCACAACATGTCTTCGGGCACGAAGAGAGCGAAAATAAACCTTAAAGACTGCTCCGTAAGGTGCTTGCTGTGCGACTTGGAGATGAAAGTTAGCGCCATCAATGAGCACAATCAGAAGCACATCTCCAAGAACATCAAGCCGAGGAATATTTACACTTGTGCCGAGTGCGCGCAGAAGTTCAAGAGTTGCAGTAATTTGGCGAATCATATTAAGCTAGTCCATAGGTTGAAGCAGACAAAAGATCAAGTGCCGCGGCAGTTCATCGGCGCGGACCTGGCGGATTTTTGTGAGGTCGTTGTGACGAAGGCGGAACCCCTGGACCACATCCAGAGTCACAACGGCTTTGGGGAGGTTCCGTCGCAGGCGGCACCAACAGTGGACCTTAGCGGATTTACGTGTCCCACCTGTGGCAAGAAAATGCCCACTCTCATCTCTCTGAAGCGCCACGTGAACTGGCACTCCTACGTCGGGGCCAACCTCGAGAAGAAATACGAGTGCTTCGTTTGCAAGGAGACATTCAAGTTCCAGTGCCACTTCAAGATCCACATGCGCGAGCACTACCACGACCCCAACATCGACCCGGCGCTGCTCACGTGCTCCACCTGCGGCCGCAAGAGCAAGCACCTCCGCGCCGCGCAGGCCCACATGAACTGGCACAAACAGACACGCTTCCAGAACAAGGACTATCAGTGCTCGATTTGCAAACGCGTCTTTCAATTTAGAAAAGTCTACTTATCCCACATGGCCATACACTACAAGAAGGGAGAGAGCGCCATGAACACCGTAGTCGGAGACATGCAGTGGGGGGACAAGGCGTCTCTCGACGGCTCCTTCACCTGCCAGCTTTGCGGGAAGGTCTGCCTGTCCGAAACCTCTTTGAAGCATCATCTCATCTGGCACAAGTCGAAAACACTCCTGTATGGGGCGAGACACGAATGCCAGATATGCCAACTCCAATTCACCAACAAGCGGCACCTGGAGCTGCACATCCGAGCGCATTACGAGGACGAGAACGGCCCCTTCAAGTGCAATATCTGCGGGAAAGGATACACCGACGAGGACTACATGCGGCGACACATGAAAGGCCACAACTTCGACCACTCCTCGCACAAGAAGCGTCTCGAGAAACTTCGAAAAGATAAAGTGAAGTGTCCGATATGTTCCCGGTACTATCCCGATTTGGTGCGATTGATTCGACACTTACGTCGCACGCATCCCGAGTCCAAAATGATAAAGGAGGACCCGGACGGCCCGCCCCCTTCGTACTTCTCGTGCAAGCTCTGCGCCAAGGTTTTCCTCGACGAGGCTCGTTTGAAAAAGCACGAAGAAATGCACCTCCGCAAACCGAACTTCTTCCGATGCAAGTTCTGCGGCCGCAAGACGATATCTCTGAAAGCGCACAACGTACACATCAAGGCGCATTTGACGAGGAAGCACGTGGACAACCCGCTCAAGTGTCCGCAGTGCGAGGAGGTGTTCGTGCTGGGCTACGCGCTGCACCACCACCTGCGGGACGCGCACGGCGTGCACGAGACGTGGATCGCGGAGCGCGCGGACGCGCCGCTGGCGGGGCCGCTCAAGGACCTGCAGTGCTCCGTCTGTCTGAAAGTCCTCGCGAGCAAAGGAAACTTCGAGCGGCACCTCGACTACCACAACTCGTTGCGCTGCAACTACTGCTTCGACTACTTCGGCGGGCTGCGGTTCCTAGAGGGACACCTCGCGTTCAGCTGCGACAAGAAGAAGCTGGTCGGCGACACGGAGGTGCACCCCCGGCGGATCAAGTGCGAGCTGTGCTACAAGGCCTTCCACCTGCAGGTGAAGCTGGACTGCCACCTGCGCACGCGGCACGGCGTGTGCGTGGAGCGGCGCGCGGGCGCGGCCAGCGCGGACCCCGTGTGCGACTACTGCTTCCGCACGTTCGAGAACGAGTTCGCGCTGGCCGGCCACCGCGTGTACCACCGCGCCGTCGGCTACTTCGGCTGCATCTACTGCCCGAGGAAGTTCAACACGCGCGCCGCCTACAACAGGCACAAGACGCAGCACCTCTACTCGCTCAGCGCCGACGACCCCACCAAGTGCGAGCACTGCGACGACAGGTTCGTCGCCTTCCGGGATATGATCGATCACATGAGGGACGTGCACGGGGACGACAAGGAATGGATCGTCGAACCCAAGGAGTCGACCGAGGAGAAGTGCCCGATATGCGGGAAAATGTTCTACAACCTGCCGCGCCACCTGCAGTACCACGAGGAGAACAAATGCAAGAAATGCAACGAGTACTTCTATTCGCGGCTCGACTGCGATAATCACCTGTGCGCGATCGAGAGCGACGCGGAGGAGCAGGCGGCCGGCGGGGACGCCCCGGCGCGAGCTTACGAGGAGTGCACCTTCTGCTTTAAACCGATCACAAAAAAAGATTCCAAGAAGAAGCACGATATCTTACACAAAACTTCGGGCGCGATTTCGTGTCGCTTCTGCCACCTCAAGTTCAAAACGATCGACGCGTTCAACATTCATGCGTTCTCTCACCGCAGCCGCAAGTACGTGAAGCGGCCGATCAAGTGCCGCGTGTGCAAGGAGCGCTTCACCAAGTACGGGCCCTTCATGAAGCACATGAAGGCCGCGCACAAGTCTGCGAAGAAGCTCCACTACCGAGCCGCGGTGAAGGCGGAGCGCTGCGTCGTGTGCGGCGCGCTGTTGCCCAACTTGCACAACCACTACCGCGCGCACCTCCTCAACCGCTGCCAGCTCTGCGCGAAGTACTTCACCTCGTCGCGGCTCTACGCGCGGCACGAGTGCGGCCAGGAAGACGCGGACCCCACCAAAGTGTTCACGTCGGAAGTGGACCTGCCCGCGCTCGTAGCTTCCTACATTCCGAAAGACGAGAAGGACGATGAAAAGTTCTACGGGTACACGGATGACGAGGAAGACCCGGAGCCCGAGCCGGAGGAGTTCCCCTCGCGACCGAAGCCTAAGGCCGTTAAAACTTACTCGAAGCCCGCGAAGCGACCTCATATCGCCGAGCTGCCGAGAGCCCGGCCGATAGACAGCCAGCTGGAGGAAGACGAGCGCAACTTGCACATGATGGTGCAATCCCCGATCATTTCCGACGTGCTCTCGCTTTATCAGAAAAAGGAGATCGATTCGGATTCAAAGAGTCAGACGAGTCAGTTCGGCGAAGTCGTTCACCTCAGCGATGATTCTCTCGACGCGACGGACATGAACCCGCCCGTCATCGTCATCGACGATTCTAGCTAA
- Protein Sequence
- MALKLGKCRLCLKLGDFYSIFTVDNAVQLAEMVMDCARIKVYEGDGLPDKVCAECIQKLSSAYIFKQQCERADQELRRNYVPPPGFSISPPPPNRQSSDSAFSTHTDSSNIKTTFIESKVTPVKRNRKRSVESDNASEASRSQDYGRPSSSKRVEELRRTQKRPRLSANNSNNSQCDSDYEDNGGSSYIPETDNDSDEPLIKPDENKCDICSKSFRWRKSLKVHMKNIHGIKDSFDAIVADNSVTAVSTPKKPTDTSFDDEEKLSCSRCDKTFKLKIMLKRHLESCTGKSPVKSPIKSPQKELFISLEPIDAVHKITVKKPTCEYCTAKFKTVENLEKHLRIVHAAVLKKEIDAKVAKGGPKPGLQFKAGSNVFTIPCIYCEKPFDDYYVHQSHFTTCPKKDMRSVFECPICQKVSSRKNGYFIHIKSIHFEPRACKAEDPSESSFECRICSKKLVSQEMLVTHLAAHASNIDDDNDDTAHDDGDSRPSTFEDSASVHSAHSTPAPGGSLKCRTCDKEFKYRKSLVTHEAKHTEDEVRVKNEPPDKTSMSLLSETHRESDFESSQDDDESDDLTCDICEKMFSYKRLLEHHKRTKHNMSSGTKRAKINLKDCSVRCLLCDLEMKVSAINEHNQKHISKNIKPRNIYTCAECAQKFKSCSNLANHIKLVHRLKQTKDQVPRQFIGADLADFCEVVVTKAEPLDHIQSHNGFGEVPSQAAPTVDLSGFTCPTCGKKMPTLISLKRHVNWHSYVGANLEKKYECFVCKETFKFQCHFKIHMREHYHDPNIDPALLTCSTCGRKSKHLRAAQAHMNWHKQTRFQNKDYQCSICKRVFQFRKVYLSHMAIHYKKGESAMNTVVGDMQWGDKASLDGSFTCQLCGKVCLSETSLKHHLIWHKSKTLLYGARHECQICQLQFTNKRHLELHIRAHYEDENGPFKCNICGKGYTDEDYMRRHMKGHNFDHSSHKKRLEKLRKDKVKCPICSRYYPDLVRLIRHLRRTHPESKMIKEDPDGPPPSYFSCKLCAKVFLDEARLKKHEEMHLRKPNFFRCKFCGRKTISLKAHNVHIKAHLTRKHVDNPLKCPQCEEVFVLGYALHHHLRDAHGVHETWIAERADAPLAGPLKDLQCSVCLKVLASKGNFERHLDYHNSLRCNYCFDYFGGLRFLEGHLAFSCDKKKLVGDTEVHPRRIKCELCYKAFHLQVKLDCHLRTRHGVCVERRAGAASADPVCDYCFRTFENEFALAGHRVYHRAVGYFGCIYCPRKFNTRAAYNRHKTQHLYSLSADDPTKCEHCDDRFVAFRDMIDHMRDVHGDDKEWIVEPKESTEEKCPICGKMFYNLPRHLQYHEENKCKKCNEYFYSRLDCDNHLCAIESDAEEQAAGGDAPARAYEECTFCFKPITKKDSKKKHDILHKTSGAISCRFCHLKFKTIDAFNIHAFSHRSRKYVKRPIKCRVCKERFTKYGPFMKHMKAAHKSAKKLHYRAAVKAERCVVCGALLPNLHNHYRAHLLNRCQLCAKYFTSSRLYARHECGQEDADPTKVFTSEVDLPALVASYIPKDEKDDEKFYGYTDDEEDPEPEPEEFPSRPKPKAVKTYSKPAKRPHIAELPRARPIDSQLEEDERNLHMMVQSPIISDVLSLYQKKEIDSDSKSQTSQFGEVVHLSDDSLDATDMNPPVIVIDDSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00634735;
- 90% Identity
- -
- 80% Identity
- -