Ahis006166.1
Basic Information
- Insect
- Apocheima hispidaria
- Gene Symbol
- Morf4l1
- Assembly
- GCA_947579745.1
- Location
- OX388156.1:2110368-2118908[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 25 0.0067 0.42 11.4 0.3 1 23 101 123 101 123 0.96 2 25 0.075 4.7 8.1 0.9 3 23 153 173 153 173 0.97 3 25 0.016 1 10.2 2.6 1 22 193 214 193 214 0.96 4 25 3.2 2e+02 2.9 0.0 9 23 234 248 233 248 0.90 5 25 0.011 0.67 10.7 2.4 1 22 638 659 638 659 0.97 6 25 0.00073 0.046 14.4 0.3 1 23 679 701 679 701 0.91 7 25 1.7 1e+02 3.8 0.6 5 23 709 728 706 728 0.93 8 25 0.0032 0.2 12.4 0.1 1 23 818 841 818 841 0.95 9 25 9.2e-05 0.0058 17.2 3.1 1 23 849 871 849 871 0.98 10 25 0.00014 0.0088 16.7 1.2 1 23 877 899 877 899 0.98 11 25 1.7e-06 0.00011 22.7 1.3 1 23 905 927 905 927 0.98 12 25 9.2e-08 5.8e-06 26.7 1.3 1 23 933 955 933 955 0.98 13 25 5.7e-05 0.0036 17.9 1.7 1 23 961 983 961 983 0.98 14 25 1.2e-07 7.7e-06 26.3 0.9 2 23 989 1011 988 1011 0.96 15 25 0.0074 0.46 11.2 5.2 1 23 1020 1043 1020 1043 0.97 16 25 0.027 1.7 9.5 2.9 2 23 1050 1072 1049 1072 0.92 17 25 0.01 0.64 10.8 2.1 1 23 1078 1101 1078 1101 0.95 18 25 0.0037 0.24 12.2 8.0 1 23 1110 1133 1110 1133 0.96 19 25 0.031 2 9.3 1.0 2 20 1137 1155 1136 1157 0.91 20 25 0.013 0.84 10.4 0.7 2 19 1161 1178 1161 1183 0.90 21 25 0.0009 0.056 14.1 1.6 1 23 1192 1214 1192 1214 0.98 22 25 0.013 0.81 10.5 0.9 1 20 1221 1240 1221 1240 0.87 23 25 0.039 2.5 9.0 3.6 2 21 1249 1268 1248 1269 0.93 24 25 3.8e-06 0.00024 21.6 1.3 1 23 1277 1299 1277 1299 0.97 25 25 0.00018 0.011 16.3 0.2 2 23 1305 1327 1304 1327 0.95
Sequence Information
- Coding Sequence
- ATGGCTCAGTTTGTGGACGGTGAAAAAGTGCTGTGTTTTCACGGATCTCTCATGTACGAGGCAAAATGTCTCAAATGTAAAATTTCCAAAGATAACAACATTCGCTACCTGATACACTATGTTGGGTGGAAGAAAAATTGGGATGAATGGGTTCCCGAAAGCCGTATCTTCAAATACAATGAAGCTAATATGCAGCGCCAGAAAAAACTGCTAAGGGTGTATAATGAACAGCCGGTTCCATGGAAAAGAAAATCAGACACCATAATGAATGAAAATAGGGAAATAAAGACCAAACAAAACTATGCATGCACTTTATGCATCGAGGCATTTTCTTCACAATCCGATCTTGACAAACATAAGAAATGGCACAGCCTGCAGTTGGAAAATGATGCAGAAATTATGGATGAAATTGAAACGAAAACAATAGATGAAAACGAAACCAGACAAAAACATTGGTGCTCGTTTTGTACTAAAATGTTTTATGCACAGTCAGAATTCGACAAACACTGGCAATGGCACATCCTACAACTAGAACATATGCAAAGTTGCTGTGTCGAATTGAATCAATTAAAAATATTTCAATGTGATTTTTGCACGAGTTGTTTCTCGGATTTAGCTAAGCTGAACGAACATCAAAAGAAATATTTCAAAAAAAGGAAAAAGGCGACTGTAAATGAAACCACGCCAAGGAACATCGAGCCATTTTCTTTAGAATCAGATCTTGAGAAACACACGAACGTGCACACTCTGCAGTCTACACATGAAGCAGACATAATCATGGATGAGAATGTAAAGAACAAGATTGATACAAATAAAATGAACGAGATGGATAACACTGACACTAACAAGATTGAAGAAAATAAAACTAACAAGATTTATGAAAATGAAACAAACAATATTGATGAAAATGAAACTAACAAAAGGGATAGAAATGCCACAACCAATAAAGATGAAAATAAAACTTACAAAATAGATGAGGCAAATGATATGGATGAAAATGAATCAAAGAAAATGGATACAACTGAAACAATCGACATGGATAAAAATGAAACAAAAGCCATGGATAAAACTGAAACAAACAATACGGATGAAAATAAAACGAACACGATGGATCCATCGAATGAAACCATCGATGAAAATAAAACAAACAAGGTCAATGGAAATGAAACTATAAAGATTTATGACAATGAATGTGATATAATTGACCAAAATAAAACAAACATGGTCAATAGAAATGAAACTAGCAAGGTTGATGACAATGAATCTGATAAAATTGACCAAAATAAAACAAACAAGGTCAATGGAAATGAAACTAACAAGATTGATGACAATGAATGTGATACAATTGAACAAAATAAAACAAACATGGTCAATGGAAATGAAACTAACAAGATTGATGCCAATGAATCTGATACAATTGACAAAAATAAAACAAACAAGGTTAATGGAAATGAAACTAACAAGATTGATGACAATGAATCTGATACAATTGACCAAAATAAAAAAAACAAGGCCAATGGAAACGAAATTAACAAGATTAATGACAAGGAATCCGATACAATTGACCAAAATAAAACAAACAGGGTCAATGGAAGTGAAAATAACAAGATTGATGACAATGAATCTGAGACAATTGACCAAAATAAAACAAACAAGGTCAATGGAAATGAAACTAACAAGATTGATGACAATGAATCTGATACAATTGACCAAAATAAAAAAAACAAGGCCAATGGAAACGAAATTAACAAGATTAATGACAAGGAATCCGATACAATTGACCAAAATAAAACAAACAGGGTCAATGGAAGTGAAAATAACAAGATTGATGACAATGAATCTGAGACAATTGACCAAAATAAAACAAACAAGATGAAAAGTTGCTGTGTGGTATTGCATCAAGTCAAAATATTCAAATGTGACTTTTGCACAAGTTGCTTCCCGGACCTAGAAAAGCTGAGAGTTCATCAAAGGAAATACTTTCAGAAGGATCTCTCTACATCTCACAACAACAACAATCAAACGAAAAAGCGTTTTGAATGTGAAACGTGCGGATGGGGATTTATGCATAGTAGTACTCTCGAAGCTCACTCCGTACTCCACCAACCATATCCACATATGTGTGAGTGCGGCATCGGATACTTCCAGAAACGCGATCTGGACGCCCATCGGAAGCTCGTACATCCAAATTACATGCCTCCCAAACCTTCCCTACTCAAAGTCAAGAAAGAAACTGAACCAGAATCTAAATCCAACCAATTGAAACCCCAAAACAAACTTGGACCTAGACTTAAAGCCACTCTAACATTTAAACAACCAAAAAACAAAACAAACAAACTTAAACGCCTCAAAAGAGACAAACCCATTAAACAAGAAAAACCGATTGGACCGAGAGGAAGAAAAATTAAAAGCGAAATAAAAATGGAACTCGAAACGGACGAGAACGGCAATTATGCTTGTCCAATATGCGCACAAACATTTATAGACACTGTCGAGTTGATGACACACTTGTACAGGGATCATACAGAAACGGCGGCTGGCAGATATAAGTGTAAAATTTGCGGGAAAACATCATTACATGCCAGCAACCTCAGAACGCACATGACGAAGCATGCAGGCTTGAAACCTTACGTCTGTCACATTTGCAATGGAAGATACTCCCAGAGCGGGGCACTCAAGCTACACCTAAAGAGACACGCTGGGGATAGACAATTTAAATGCAAAGAGTGCGATAAATCTTTTTATAATAGTGCAGACCTCAGGCTTCATTCGAGAATTCACACGGGGGAGAAGCCTTACGAATGCAAAGAGTGCGGGAAGTGCTTCAGCGACCCCTCAGCTTACAAACGTCACTTGCTCATACACACCGGTCGAAAGCCATTTAAGTGTCAGAGGTGTCCAAAAGCATTCTGCGACCCGGCTGCGCTATTCAGACACAATCGCTTGCATCAGGGCTACAGTGTACCGTGCTCTAAATGCGACAAAACATTTTCATCTAAAGACTCGCTCCGCAAGCACATCAAAACTGCACACAGCAGATTGAGAGATTCAGAGAAATATGAATGCGATTACTGCAGTAAACGATTTGCGTTAAAATGTTACTTAGTATTACATATGAAACATTCACATTTCCAATCTCCTGCAGTCCAGTGCGAAATCTGCTGTAAAATGTATACGACTGCTGAAAATCTTAGGCATCATGTGCATGCGATACATCTTAGAATGACCAGGTTTGAATGCGAGACGTGCGGAGCTCGCTTCCTACACAATAATCAATTGAAACGCCATAAAAGTTCAGTCCACAGATCCAAAACGGGCGACAAGCCCTTCGAATGTGATCATTGCCATAAATCATACTATAGCAAAATCCATTTATCACAGCATATAACGAAAAAGCATCTAGGTATCGTATGTCACATATGCACGAGGACATTCTCAACGTTTCTTCGATTGAAACAACACAAGTCAGAAGGCTGCAGGCGGTGTACGATTTGCAACGAGGCATTCCCGACGCCTAAAAAGTTGGAAGAACATTGCATCGTCACTCACTTGCATAGAAGTGAACAGCAACTGTTTGAATGTGATTACTGTAGCAGAGAATTTCCAATAAAGAAACGACTGCAGATGCACATGAAAAAACATTTGCGGCCGACAGATGCTTTCCGCTGCGACCACTGCAATAAGACGTTTGCTTATAGGAGGATGATCGTGTATCATATTTGGGAGAAGCATATGCTTAGTCTATACTGCAACATTTGCTTGAAAAGGTTTTACAGGGAGTGTGAGTTCCGTCGACACAAACGCAGCGCCGACTGCCGCCAGCCAGAATTTCCGTGTGAAATGTGCAATAAAAAGTTTCGTACCAATGGGCTACTTCGAAGGCATCTGTTGTATCACGCACCTAAAAGTATAGAATGTGATATGTGCGGTGCTAAATTTACAGAAAAAAAAACGCTAGCCAGGCATATAAAACTAGTGCACAAGCCTAAAGATCCCTGCTCAGAGAAACGACCCGTAGTGTGA
- Protein Sequence
- MAQFVDGEKVLCFHGSLMYEAKCLKCKISKDNNIRYLIHYVGWKKNWDEWVPESRIFKYNEANMQRQKKLLRVYNEQPVPWKRKSDTIMNENREIKTKQNYACTLCIEAFSSQSDLDKHKKWHSLQLENDAEIMDEIETKTIDENETRQKHWCSFCTKMFYAQSEFDKHWQWHILQLEHMQSCCVELNQLKIFQCDFCTSCFSDLAKLNEHQKKYFKKRKKATVNETTPRNIEPFSLESDLEKHTNVHTLQSTHEADIIMDENVKNKIDTNKMNEMDNTDTNKIEENKTNKIYENETNNIDENETNKRDRNATTNKDENKTYKIDEANDMDENESKKMDTTETIDMDKNETKAMDKTETNNTDENKTNTMDPSNETIDENKTNKVNGNETIKIYDNECDIIDQNKTNMVNRNETSKVDDNESDKIDQNKTNKVNGNETNKIDDNECDTIEQNKTNMVNGNETNKIDANESDTIDKNKTNKVNGNETNKIDDNESDTIDQNKKNKANGNEINKINDKESDTIDQNKTNRVNGSENNKIDDNESETIDQNKTNKVNGNETNKIDDNESDTIDQNKKNKANGNEINKINDKESDTIDQNKTNRVNGSENNKIDDNESETIDQNKTNKMKSCCVVLHQVKIFKCDFCTSCFPDLEKLRVHQRKYFQKDLSTSHNNNNQTKKRFECETCGWGFMHSSTLEAHSVLHQPYPHMCECGIGYFQKRDLDAHRKLVHPNYMPPKPSLLKVKKETEPESKSNQLKPQNKLGPRLKATLTFKQPKNKTNKLKRLKRDKPIKQEKPIGPRGRKIKSEIKMELETDENGNYACPICAQTFIDTVELMTHLYRDHTETAAGRYKCKICGKTSLHASNLRTHMTKHAGLKPYVCHICNGRYSQSGALKLHLKRHAGDRQFKCKECDKSFYNSADLRLHSRIHTGEKPYECKECGKCFSDPSAYKRHLLIHTGRKPFKCQRCPKAFCDPAALFRHNRLHQGYSVPCSKCDKTFSSKDSLRKHIKTAHSRLRDSEKYECDYCSKRFALKCYLVLHMKHSHFQSPAVQCEICCKMYTTAENLRHHVHAIHLRMTRFECETCGARFLHNNQLKRHKSSVHRSKTGDKPFECDHCHKSYYSKIHLSQHITKKHLGIVCHICTRTFSTFLRLKQHKSEGCRRCTICNEAFPTPKKLEEHCIVTHLHRSEQQLFECDYCSREFPIKKRLQMHMKKHLRPTDAFRCDHCNKTFAYRRMIVYHIWEKHMLSLYCNICLKRFYRECEFRRHKRSADCRQPEFPCEMCNKKFRTNGLLRRHLLYHAPKSIECDMCGAKFTEKKTLARHIKLVHKPKDPCSEKRPVV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -