Ahis012755.1
Basic Information
- Insect
- Apocheima hispidaria
- Gene Symbol
- -
- Assembly
- GCA_947579745.1
- Location
- OX388172.1:6754291-6781121[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 3.7e-12 6.4e-09 35.9 1.2 3 44 44 86 42 86 0.96 2 9 1.1e-11 1.9e-08 34.4 0.6 3 44 109 151 108 151 0.96 3 9 1.6e-14 2.8e-11 43.5 2.1 1 44 207 251 207 251 0.98 4 9 0.00025 0.43 10.9 0.9 13 43 304 333 296 334 0.88 5 9 1.7e-14 2.9e-11 43.4 0.4 1 44 379 421 379 421 0.96 6 9 2.4e-12 4.1e-09 36.5 1.6 1 43 486 527 486 528 0.97 7 9 8.7e-15 1.5e-11 44.3 1.1 1 43 561 602 561 603 0.97 8 9 2.6e-09 4.5e-06 26.8 0.2 1 44 623 665 623 665 0.96 9 9 4.8e-06 0.0083 16.3 0.0 1 43 860 897 860 898 0.93
Sequence Information
- Coding Sequence
- ATGGATGAAAATGAAAGAAATTGTGATGATGTAGACCCCGACTATGTGCCCGATGAGCCGAATAAAGAAGACGAAGACATTCAGGAGGAGCAAGAGACATCGGAGAAAAAACGAAGACCCAAGTTCACTATTTGGAAGTATTTTAAAAGGTTATCACCAGCGTCGCAGAAAAGAGCTAGATGCCGCATCTGCCTCGAAGTTAAGTCGTACAGGACGAGCTCAACTAATTTGAAATCGCATCTGAAATTTAGACACCCGAAAATTATGGAGCAGTGCTTGGAACCGACGCGGCCGCCATGCAAGCCCCGATGGCGAGACCCCACAATATGGAAATATTTTAAAAGAGGCCCACCAAACTCAGAGAAAATAGCGCAATGCAACTACTGCCAACAGCTGCGCTCGTACAAGACCAGTATTACCAACCTGAAGACGCATCTGTCCCTTAAACATCCTGAGGTCGTCGAGCAGGATCAACAGCTTGTGCGGAGAATCTTATCGGGCTCCGATTTATCAGAGACTATGGAGGGTCATGATGAGGAGACAAACGCTGAAAAGGAGCAAGACGAAAATAACGCTCAGCAGGTGAAACGCGTGAGACCAGCGAGCGACAGAGGCTACTCGAATATATGGAATTATTTTAAAAAACTGGAACCATTCCAAGAGAAGTTGGCGAGTTGTAAATACTGCCACAAGATCCGTTCGTACAGGTCCAGCATTACCAACCTTAAGACACACTTGGTCTTGAAGCACCCCGAGGATATACAGCACGATGGGTACTTTACCGATAAAAACTATTTAGCGAGAAGCCAACAGAGAAAGAAATTTGCAAGAAACAAGAGAAAAATGTGGGAATTCTTGGAAATAGAAACTGATAATGATGAATTCGACGCTCAAAATGATACAAACGATAATAGAAACGTAGCCAGATGCAAGCTTTGCAGTCAAGATATCCACTTTACAACGACCGATACGCTGAAGCATCATATCCTAAAATTGCATGGTAAGGATATAACTCAGGGCTCTTTAACTGTGGATGAGGAAGAATTTAACTTGGATGATACCTCAGATGCGGACAAACAAAGACATTTGGAAGACGATTCTGAAACCTTAAATACAAAGAAATACGAAAGACGTAGCAAGAACTGGGATTACTTCGAGTTAGTTGATGAGGTGAACAAGATAGCCAGATGTAACGCTTGTGGCAATGATTTAAGCTACTCCACAATCAGCAACCTGAGGAAGCACCTGAATAGGAAGCATTCTAGTTTAGGTGCCATTCCTGAGTTTGCTTCCTCACCATCACCACAGAAAGCTCAATTAAAAAGGTCGTTGTACGTGTTTGGTGAAGCATCTGGTCAAGCTAAAATTGTCATTGATGCAAAAAATCTCATCTCATCCAAAACTTTCAGAAAAAACTTCGTACCGGAGAATTTCAAGCGTCAACACAAATTTCGAAGCAAAGTGTGGAAATATTTCGAAATTATAGACGAGCCAGCTAAACTGGCCAACTGCGGGCTCTGCAATAATAACTTTAATTATACATGCCTCTCGAATTTGAAGAAACATCTTAGAAAGAAACATGAAGGAGAGTTGACGTCTTCAGAAGAGGAGGGCGAAGTTGAGATTCTCGAAGAAAAACACTTCGTACCGAAGAATCTCAATCGTCAACACAGATTTCGAAGCAGAGTGTGGAAATATTTTGAAATTATAGACGAGTCAGCTAAACTGGCCAACTGCAGGCTCTGCAATAATAACTTTAATTATACAGGCCTCTCGAATTTGAGGAAACATCTTAGAAGGAAACATGAAGGAGAGTTGACGTCTTCAGAAGAGGAGGGCGAGGTTGAGATTCTCGAAGAACAAAATTCAACAGTATGGGCCTATTTCAAATGTCTTTCCGAAGATCTCAAGATAGCGTCATGTCTGATTTGCAAAAAGAGAGTAGACTACAACGACGACGATGATCTTAGTAAGCATTTGAACAGAAAACACCCTCAAGTGCAAGCGGAATTGAATAGCGCTACTAGCAAGCCAAAGAAGCTAATGATAACTGGTAACGGTGATATTTACGAGATAGACGAAGATGTTGCCAAGCAGGAACCAATTACCGTTCAGGAAGTAAACGACAATGACAGTGACGGCTGGCCTTACAACAATGACGAGACTGATGCATTGGACACGTCAGAATACTTGGAAGAAAACATATTCAACGAGCACAAAAGCGTTCCAGCCAAGAAAAGCCGCCTAAGTTATCAAAAAACTTCGGACAGGCACGAGAATATACGCACGCAAATAACTAATCAAAATCAAAAAACTTCACAACCATGCGACGAGGAGAGCTCTTTAGACATATTTGGCAAATACATGGTATCGCTGTTGAAAAAACTACCGAAACATAAATCGGATCAACTACAAGCAGACTTCGTTAAACAAATCATGGATGCTCAAAACGATAGTGAAAATACTCGTGGCCGACATACTCGTTCCATCACTGTTCAAAATACTCATACTCGAAATACTCGTACTAGTATCGACGATAAACGCGTCACTAATGAGACAGGAAACGTGAAATTCTCATCGGAAATATGGCGCCACTTCGACGTGGAGGACGAGGAAGCTACCTGCGGCCTCTGCCGGGAGACCACACCCAGCAGCCTCGAGCACATGAAGAACCATCTAGAAGATAAACACGCCAGCGTGCTCGATGATATAGCGCAGAAGGTCCTGGACGCAGCATCGGAAGATGACGTGTTAGGGGATGACGACTTGTACACAGAAGTCGTCTACTTAGAAGACGAGCCGAAGACAATCGACGAACAATCTGAGAAGCCCAAGAAAAAACTAAAACCTCCAAAACAAAAACTACTAAGAGTAAAAACTGAGAGACGTGCCAGCACTTCTTCCGACGAGCTCCTTCGAAAACCCAGACGTAAAAGTTATGACACAACTAGAGAGCCTGACGAACTAGCGACGTTCATAAATTACATCGCGGTTTTACTAAAAAAAGTCCCAAAGGAATCGAGCCAGAAACTGCATTTGGACATAATAAATTTAATTATGAACGCAACGCAACCTCAAAACAAAATTGTGATAGAAACTGTTAATTATAGCGCTGCTAATGCTAGTAACGTGTCTGCGATACTCAATGAAAGTTTAATTTTATCACATAATGGTACAAGTACCAGTGACTCGAGTACTTTGAATGCTCAAAGAGTGTTAACAGTGCCTGTAGAGAGTTTGATTCCTCAACACGACGAAAAAAATACCACGTCTCAGGTTACAGCGTCAAATATAATGTTATAG
- Protein Sequence
- MDENERNCDDVDPDYVPDEPNKEDEDIQEEQETSEKKRRPKFTIWKYFKRLSPASQKRARCRICLEVKSYRTSSTNLKSHLKFRHPKIMEQCLEPTRPPCKPRWRDPTIWKYFKRGPPNSEKIAQCNYCQQLRSYKTSITNLKTHLSLKHPEVVEQDQQLVRRILSGSDLSETMEGHDEETNAEKEQDENNAQQVKRVRPASDRGYSNIWNYFKKLEPFQEKLASCKYCHKIRSYRSSITNLKTHLVLKHPEDIQHDGYFTDKNYLARSQQRKKFARNKRKMWEFLEIETDNDEFDAQNDTNDNRNVARCKLCSQDIHFTTTDTLKHHILKLHGKDITQGSLTVDEEEFNLDDTSDADKQRHLEDDSETLNTKKYERRSKNWDYFELVDEVNKIARCNACGNDLSYSTISNLRKHLNRKHSSLGAIPEFASSPSPQKAQLKRSLYVFGEASGQAKIVIDAKNLISSKTFRKNFVPENFKRQHKFRSKVWKYFEIIDEPAKLANCGLCNNNFNYTCLSNLKKHLRKKHEGELTSSEEEGEVEILEEKHFVPKNLNRQHRFRSRVWKYFEIIDESAKLANCRLCNNNFNYTGLSNLRKHLRRKHEGELTSSEEEGEVEILEEQNSTVWAYFKCLSEDLKIASCLICKKRVDYNDDDDLSKHLNRKHPQVQAELNSATSKPKKLMITGNGDIYEIDEDVAKQEPITVQEVNDNDSDGWPYNNDETDALDTSEYLEENIFNEHKSVPAKKSRLSYQKTSDRHENIRTQITNQNQKTSQPCDEESSLDIFGKYMVSLLKKLPKHKSDQLQADFVKQIMDAQNDSENTRGRHTRSITVQNTHTRNTRTSIDDKRVTNETGNVKFSSEIWRHFDVEDEEATCGLCRETTPSSLEHMKNHLEDKHASVLDDIAQKVLDAASEDDVLGDDDLYTEVVYLEDEPKTIDEQSEKPKKKLKPPKQKLLRVKTERRASTSSDELLRKPRRKSYDTTREPDELATFINYIAVLLKKVPKESSQKLHLDIINLIMNATQPQNKIVIETVNYSAANASNVSAILNESLILSHNGTSTSDSSTLNAQRVLTVPVESLIPQHDEKNTTSQVTASNIML
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -