Basic Information

Gene Symbol
XBP1
Assembly
GCA_947579745.1
Location
OX388148.1:14717810-14720118[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.1e-17 2.8e-14 53.1 8.0 2 52 40 90 40 92 0.97
2 2 2e-05 0.019 15.2 0.7 31 55 83 107 82 112 0.90

Sequence Information

Coding Sequence
ATGAGTGCTCCAATAATCATCACGGTGCCGAATAACTACGTCATGAAAGAGGAATCGGAAGATTCGTTGGAAGTCCCGCCGCCTTCCCGCAAGCGGAGACTGGACCATCTTACTTGGGAAGAGAAAATGCAAAGAAAGAAGTTGAAGAACCGCGTGGCGGCGCAGACTTCGCGCGATCGGAAGAAGGCTAAAATGGACGAGATGGATTACCGCATCAAGGCCCTCGAGGACAGGAACGATAAGTTAATGAGCGAGGTTGAGAGCTTGAAGGCGTTGAACGAGAGGTTATTGAGTGAGAATGCATCGCTTCGCAGCGAGGCGGCGGCGCGGACCGTCGCGGGAGCCCCCGGACCAGCAGCGTCCCCTCAGCAGAAGGAAGGGCTCCCGCCGGCGATCCGCGCGGCGCGCCTGCTGCTGGCGATGTGTCTCCTCTCGCAGACCTCCTCGCCCAATTCGACTCTGAAGAGTACCTCGAAACCCTCAATCAACTTGCAAACTCCCTCCTCGAGGAAATTGATGCAAGTGCTGCAGGAGCGGCTAAAAATATCACAAACGGGGAATCTGGAGAGTGTTCTAAAGGAGATAAAGTGGTGGGGCCCGCAGCAGAGCACCTGGAACCCCATGGAGGTGCAGTCCTAG
Protein Sequence
MSAPIIITVPNNYVMKEESEDSLEVPPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMDYRIKALEDRNDKLMSEVESLKALNERLLSENASLRSEAAARTVAGAPGPAASPQQKEGLPPAIRAARLLLAMCLLSQTSSPNSTLKSTSKPSINLQTPSSRKLMQVLQERLKISQTGNLESVLKEIKWWGPQQSTWNPMEVQS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00818104;
90% Identity
iTF_00666248;
80% Identity
-