Amei003864.1
Basic Information
- Insect
- Apis mellifera
- Gene Symbol
- grn
- Assembly
- GCA_003254395.2
- Location
- NC:7989376-8069729[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.6e-19 3.5e-16 57.6 4.7 1 35 501 534 501 535 0.98 2 2 9.1e-18 1.2e-14 52.7 5.6 1 35 558 591 558 592 0.97
Sequence Information
- Coding Sequence
- atggACATGAGCAGCGAGTCGAGCGCGGCCAGGTGGTACGAGCCACCTAGGTCCACCCTGGAGCCGCCCTCGGGGGGTGCAGGAGTCGCGGGAGTCGTTGGAAATCCGACCGATTACAGGGGTTACTACCCGCACGCGGGGCCGACCGCCCATCACCCCGCAGCAGCGGCCGCTCACTATGCCCACACAAGGATGTCGAGCAGCGGAGTGGCGAGCGGGCCCGTGAGCCAGGTGTGCCGGCCGCACTTCCACAGCTCGGTGCTGCACCCGTGGCTGTCGGGGAGCGGGGCGGACACGTCGAAGACGCCGTGGGGATTCCCGACGACGACCGGCTCGGGCGGGAGCGGGGTGGCCGACGACAAGCCCCAGAGCCCCCTGGGATCCTCCCTGCCGCCGAGCACCGGCAGCCTCTCGAGCCACGGCGGGGCGGGGGCCGGCCACCACCTGTTCTCCTTCCCCCCGACGCCCCCCAAGGACGCCACCCCCGACAGCATCACCGCGAGCACCACCTCGGCGGGCAACAACAACAGcggcaacagcaacaacaacaacaacaacaacacgaCCAGCGCCAACAACAACGCCAACAACCCCCTGTCGGGGCTCGGGGGTGGGGCGAGCAGCGAGTACCAGGCGGCGGTTGCCCACGCGGCGGTGATGGGCGCGTTCATGCACCACCAGGACGCGCTGGGCGGCGGGGGAGCGGGCTCGTGCGACGTGAAGCCGAGCGTGATGCTGGCCCATCACCACGGCGCGCCGTCGCCGCCCCATCAGCAGCACAACGGGACGGCGAGCGGCGGGAACGGAGGGACAGGGGCGAGTGGAGGCGGCGGGGCGAGCGGGCAGGTGAAGCAGCGCGAAGGTAATAATCAGTCGGGCAGCCAACAGGCGAGCACCgcgcaacagcagcagcagcagcagcagcagcagcagcaacagcagcagcagcagcagcagcagcaggaGGCGGCCGCGTATCAGGGGAGCAACGTGGGCGGCGggggtggcggcggcggcggcgggggGGCGAGTTCGCCCTCGTGCAGGGAGAGTTACGCGGCTgcggccgccgccgccgccgccgccgcggcCGCGGCCGCGGCTGCCTCCAACACCCACCACGCGACCTCCGGATCCCAGTACGACCCGGCAACCAGCGCGTATAACATGTACCAGCACCTGCAGTATCCTAGTACcacccaccaccaccaccatcaccatcaTCACGCCGCCTCCTCGTCgtcttcttcgtcttcgtcCCACAATCCGCACAACGGGGCCGCCGCGGTCTCCGGTATTTTCGGCCACCACGCGGCGGCGGCCGCGGCCGCCGCCGCTGCAGCCGGGGCCGGGAACGCGGCCGGCGTGGCCGGCGTGAACGTCGACTCGAAGCTGTTGGTCGGCCACGTGCACGCCAACACGCCGAGCTCGCCTTCCgcgcagcagcagcagcagcaaaaGCCCAGGAACAAGTCGAGAACGTCCGCCGAGGGCCGCGAATGCGTGAATTGCGGCGCGACATCGACGCCACTGTGGAGACGAGACGGTACCGGTCACTACCTCTGCAACGCTTGCGGCCTCTACTACAAGATGAACGGGCAGAACCGACCTCTCATCAAGCCGAAACGACGGCTGTCGCTGCAGAGTGCGGCGAGGCGGGCGGGCACCAGCTGTGCCAACTGCAAGACCGCGACCACCACGCTCTGGCGAAGGAATCAGGCCGGAGAGCCAGTCTGCAACGCGTGCGGCCTCTACTACAAGCTGCACAACGTGAATCGGCCGCTCACTATGAAGAAGGAGGGCATACAGACGAGGAACAGGAAACTGTCGTCGAAgagcaagaagaagaaggctgGCGGTTGTCTGGGGCTTGGTGGCGTGATGGGTGATATGATCAAGGCCAGCGGCCACCTCGACCTCGACAACAAACCCTTCCACTCGGGCTTCGGTTCACCCATGaGTACGTCGCAGCATCATCACACGATGCATCCAGCGATGCAGCACTACATGTATCACACGGGGGTGGGGGTGGCGGGTGGGCTCCACCAGGGATTCGCGCCCCCAGCGCCGCCACCGATCCACCCCCACTCGCACTCGCACTCCCATTCCCATCACATGACGAGTCTTCAGGGTCTCCAGTTGGCAGCCACGACGAACGCGATGACCGGTTGGCGATCGGAGTACACATGA
- Protein Sequence
- MDMSSESSAARWYEPPRSTLEPPSGGAGVAGVVGNPTDYRGYYPHAGPTAHHPAAAAAHYAHTRMSSSGVASGPVSQVCRPHFHSSVLHPWLSGSGADTSKTPWGFPTTTGSGGSGVADDKPQSPLGSSLPPSTGSLSSHGGAGAGHHLFSFPPTPPKDATPDSITASTTSAGNNNSGNSNNNNNNNTTSANNNANNPLSGLGGGASSEYQAAVAHAAVMGAFMHHQDALGGGGAGSCDVKPSVMLAHHHGAPSPPHQQHNGTASGGNGGTGASGGGGASGQVKQREGNNQSGSQQASTAQQQQQQQQQQQQQQQQQQQQQEAAAYQGSNVGGGGGGGGGGGASSPSCRESYAAAAAAAAAAAAAAAAASNTHHATSGSQYDPATSAYNMYQHLQYPSTTHHHHHHHHHAASSSSSSSSSHNPHNGAAAVSGIFGHHAAAAAAAAAAAGAGNAAGVAGVNVDSKLLVGHVHANTPSSPSAQQQQQQKPRNKSRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLSLQSAARRAGTSCANCKTATTTLWRRNQAGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKAGGCLGLGGVMGDMIKASGHLDLDNKPFHSGFGSPMSTSQHHHTMHPAMQHYMYHTGVGVAGGLHQGFAPPAPPPIHPHSHSHSHSHHMTSLQGLQLAATTNAMTGWRSEYT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00230987;
- 90% Identity
- iTF_00232911;
- 80% Identity
- -