Amei008430.1
Basic Information
- Insect
- Apis mellifera
- Gene Symbol
- ZNF131
- Assembly
- GCA_003254395.2
- Location
- NC:2731771-2760042[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 16 4.6 2.8e+02 1.4 0.4 3 23 404 426 404 426 0.87 2 16 5.7 3.5e+02 1.1 1.2 2 23 489 509 488 509 0.90 3 16 3.1 1.9e+02 1.9 4.2 1 23 541 565 541 565 0.92 4 16 0.0025 0.15 11.7 0.1 3 22 623 642 621 645 0.89 5 16 0.0021 0.13 11.9 0.9 2 23 660 682 659 682 0.95 6 16 0.13 7.7 6.3 0.7 1 23 698 722 698 722 0.92 7 16 0.0029 0.18 11.5 0.1 1 21 767 787 767 788 0.96 8 16 4.8 2.9e+02 1.3 0.3 2 19 809 826 808 830 0.82 9 16 0.00014 0.0086 15.6 0.3 1 23 850 871 850 871 0.98 10 16 0.00063 0.039 13.6 0.1 1 21 877 897 877 898 0.95 11 16 5.1e-05 0.0031 17.0 2.9 1 23 916 938 916 938 0.97 12 16 0.0035 0.21 11.2 0.0 1 23 943 968 943 968 0.93 13 16 0.00016 0.0098 15.4 1.7 1 23 977 999 977 999 0.98 14 16 0.07 4.3 7.1 0.5 3 23 1014 1036 1013 1036 0.92 15 16 0.001 0.063 12.9 1.2 1 21 1042 1062 1042 1067 0.94 16 16 8.1 4.9e+02 0.6 0.6 1 23 1073 1102 1073 1102 0.70
Sequence Information
- Coding Sequence
- ATGGAGAGTTACGAGGAGGACGACGACACCCACTTCTGCATCAAGTGTCACCTGACGATACACGGTCTGGAGAATTACGTGCGTCATCGTCAATCGGGATGCCGCCCCCCCGACGACAAGAACGTCTCGGTGTGGGTCTCGCCCGCGACCCCCGCCTCCCCCACCACCGTCTCCTACCCCGAGATCCTGAACGCGGACGCGTTCTTCAGCTCGTTGGAGTTGCAGAGCAGCTCCAAGACGAATCCCCGGAAGGCGGCCCCCTCGTTGCTCGTCGACGAGGGTAAAAAGTCcacgaagaaggaggagaggcgGAAGAAGGGCGGccagaggggaggaggggtggTGGCCCAGGTGGACCAccaaggggaggaggggaaggagaagCACATTCACAACATGCTGCCACAAGTGCCCGTGCTCGTCGACGACCCGACCGATTATCTCTGCATCCCGTCCCTCGTCGGTTTCCCCGACATCGTCCCCCCGAAACCTCCCCCCTCGGCCCACAACGGGCCGCGTAACAAGTTGGCCCAATCGATGGGCCACGCGACGGGTTCCATGGTCGTCGAGGGGGGAACAGGAGGCGCGGGAGTAGGATTGGCggtcgcctcctcctcctcctcgtctccCTCGACCGCCTCCTCGAAAACGCACCACCACGAGGCGGAAAACTCTTTGGTCGGGGGGCAGGGTTtgggggagaggaagaggcaGGAGGAGCAGCAGCAGAGCAGGATGGAGCAGGTTCATCAAACGTGGCTCGAGGACACGATATTGGCCGAGTTGGTGGCAAACAACGAGGCGAGTTCGGGGAAAGATTTGGCCAGGTACGGGTTCGGGTATCAacaggaggaggacgaggaggacgataTGTTGGAGGAGGActtgggggaggaggaggaggacggctCGTACGCGGAGTCGGAGGAGGATAGGGAGCGTTCATTGCGGGGTCACACCGGTGGCAAATGGAAGCCGGAATTGGACGATCTCCCTCAAAATATGTCTCAACTTCAGGAGGACGACGAAGACGAGCAGCATCAAGAGCATCCGCCGCCGTCCCACACCGGTGGCAAGTGGCGGCCCTCGGACGCGTCCCACAAGGAGGAGTACGGGGGGGCCAAGGGGAGCAACGTCGTGGGACAGCAACCGGCGGGGCACACGCGGGGGAAATGGATACCGTCGGATGTCGTCGAGTCGGGATATTGGTGCAACCCTTGCGGCAGGAAACTCGCCTCCCGACTGGTGTACAACAGGCATCTTCGATCCGATTTGCACGCCAGAAGGAGCGTGCGAGAGATGGACGGCGTCCTTTGCCCGCAGCGCGCCGCCAACGCCGTCCACGCAGCGAAGAAACCTCGCCACCAACTCGATCGACAGAGGGTGGAAGGGAGGGGGCAGGCGGCTGAGGCGAAGCTCGGCGGGGTGAAGAAGAGTTTGCGGAGGCGGGAGAGGGAGATACTTTGCTGCGAGATGTGCAACGCGCGGGTGAGGAGGGCGCAAATGGGCAAGCATTTGCTCTCCCATTATCACTGCCGCGTGGCGGGCGTAAATCCTCGCGGGCCGCGGGCCCGCCGCTTTTTGCTCGAAAATATGGCGAATGTGGTTCGCCAGTGCCCCTTCCAGTGCTTCTCCTGCCGCTTCTATTGCAACACCGAGGACACCTTCCTGCGCCACTGGAGGTCCGAGCTTCACGCCAAAACCCTCGAGCAGATAAGCGGCAGCTACAGGTGCACCCCGTGCGACTTTTGGTGCGAGGGAAACGAGGCTATGGAGTCGCATCTGCTGGACCCGGGCCACCGAGACGTGTGCTCGATGATGAACGGCTCGGTGCCGATCATGATCGGCCGTCAGCGGGGCCTGGCGTGCGCCGGTTGCGACCGCCGCTTCCGCTACAACCTGCAGCTCCGCATCCACGCGAGGGAGACGGGCCACGAGGAGGGTTTGACGGCGAGCGACGAGTACCAGCAACGGTTGAGGTGCAAGTTGTGCCCCCGAATAGTGAGGTCGTTGGTCGCCCTCCAACGCCACCAGCTCTCCTGCCACGCGGCCAGGGCGGCGAAGGGAGGCGGAGAGGGCGACACGGAGCCCTACTTCTGCTCGTTCTGCTCGATGAATTTCGCCACGGCCAGGGAGGCTGTCCTCCATCGAAGAACGTCCAGCCACAAGGAGGTGGTGAAGGCGCGCAAGTGTAACGAGGCCGCGATCGTGGGCCGCCAGTGCCCCCACTGCGAGGAAAAACAGGCGAATCTCTCGGATCACAAGAGGCACCTTCTCGATCGCCATCCCGAACTCTGTTACAGGTGTCCGAAATGCGGCACGCTGTTCGCCCTGTCGCAAGACGTGACGAGGCACACGAGGGAGAACAAGTGCCAGGAGGACGACGAGGGATCGAGGTCGAAGGCGAAGGGCAGCGAGGAGTGGAGGTGCGGGGAGTGCAGTTTCTCGACCGAGTCCCGGTCGGAGTTCATCTTCCACGAGGCCCTTCACGCGGGCCCCGTGAGCCCCGGGTGCCAAGCCGAGAAGGGCGCCAAACCGTTGGCCAAGTACTCGTGCCCCGTGTGCAAGAGGGCGTTCGCCAAAGTGTCGTTGAGGAATCACATCAGGAGTCACACGGGCGAGAGGCCGTTTCCCTGCGCCAAGTGCCTCGCCCCCTTCTCCAGGAGGTCTGACCTGAACGCCCATCAGAAGGAGTGCGCGGGGTCCTCGTCGTCGGGGTGGCCGGGTGCCGCACGAAAGCGCGGCTTCGCCTGCTCCGAGTGCAACAACGCTTTCTACACCAAGCACTCGCTAAGACAGCACATGCTGCGACACGCCGGGAAGAAGTACAAGTGCGGGCTTCCGGGATGCCCGACCGTGCTTCGCACAGCGTCCGAGCTTAGGTCGCACGTGAGCTTGGTCCACGAAGCTACGACGTCCACGAGACGTTACAAGTGCTCGGATTGCAGTTACGCGGCCAAAACCAGGACCCAGCTTCGACgcCACCGTGCACGCCACGACGGGCCGGAGAACGCGACGAAATCGGATCTCCTCCGCCCGTGTCCGTACTCTGGCTGCGCATTTCGAACTAAGATCGCTTCTCATTTGCAACGACACGTGCGCCTCCACACGGGCACCAAGCCGTACAAGTGTCGCCATTGCCCTTACGCGAGCAACAATTTGGAGAATCTTAGAAAACACGTGTTGTCCACGAATCTGCATCCGGGGAAGACGATTTACGAATGCGACGTTTGCCAAGGGGACGATCCGGAACCATTTCGGACGAATTTCGCGAAAGAACTTCGCGCGCATTTAATGGAGGTGCACAGCGACACGTTTTCCACGCCTGGCCACGCGAACGACTACGTTATCGGGATTTTCAAAGTCCATCGGAGCACGGATTTCGTCGACGAGCCGAATTAA
- Protein Sequence
- MESYEEDDDTHFCIKCHLTIHGLENYVRHRQSGCRPPDDKNVSVWVSPATPASPTTVSYPEILNADAFFSSLELQSSSKTNPRKAAPSLLVDEGKKSTKKEERRKKGGQRGGGVVAQVDHQGEEGKEKHIHNMLPQVPVLVDDPTDYLCIPSLVGFPDIVPPKPPPSAHNGPRNKLAQSMGHATGSMVVEGGTGGAGVGLAVASSSSSSPSTASSKTHHHEAENSLVGGQGLGERKRQEEQQQSRMEQVHQTWLEDTILAELVANNEASSGKDLARYGFGYQQEEDEEDDMLEEDLGEEEEDGSYAESEEDRERSLRGHTGGKWKPELDDLPQNMSQLQEDDEDEQHQEHPPPSHTGGKWRPSDASHKEEYGGAKGSNVVGQQPAGHTRGKWIPSDVVESGYWCNPCGRKLASRLVYNRHLRSDLHARRSVREMDGVLCPQRAANAVHAAKKPRHQLDRQRVEGRGQAAEAKLGGVKKSLRRREREILCCEMCNARVRRAQMGKHLLSHYHCRVAGVNPRGPRARRFLLENMANVVRQCPFQCFSCRFYCNTEDTFLRHWRSELHAKTLEQISGSYRCTPCDFWCEGNEAMESHLLDPGHRDVCSMMNGSVPIMIGRQRGLACAGCDRRFRYNLQLRIHARETGHEEGLTASDEYQQRLRCKLCPRIVRSLVALQRHQLSCHAARAAKGGGEGDTEPYFCSFCSMNFATAREAVLHRRTSSHKEVVKARKCNEAAIVGRQCPHCEEKQANLSDHKRHLLDRHPELCYRCPKCGTLFALSQDVTRHTRENKCQEDDEGSRSKAKGSEEWRCGECSFSTESRSEFIFHEALHAGPVSPGCQAEKGAKPLAKYSCPVCKRAFAKVSLRNHIRSHTGERPFPCAKCLAPFSRRSDLNAHQKECAGSSSSGWPGAARKRGFACSECNNAFYTKHSLRQHMLRHAGKKYKCGLPGCPTVLRTASELRSHVSLVHEATTSTRRYKCSDCSYAAKTRTQLRRHRARHDGPENATKSDLLRPCPYSGCAFRTKIASHLQRHVRLHTGTKPYKCRHCPYASNNLENLRKHVLSTNLHPGKTIYECDVCQGDDPEPFRTNFAKELRAHLMEVHSDTFSTPGHANDYVIGIFKVHRSTDFVDEPN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -