Basic Information

Insect: Apis mellifera
Gene Symbol: SNAPC4
Assembly: GCA_003254395.2
Location: NC:12731106-12738220[+]

Transcription Factor Domain

TF Family: MYB
Domain: Myb_DNA-binding domain
PFAM: PF00249
TF Group: Helix-turn-helix
Description: This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 0.016 11 5.3 0.1 3 18 169 184 168 186 0.93

2 6 4.1e-14 2.9e-11 42.4 1.1 2 45 275 320 274 321 0.95

3 6 1.2e-07 8.8e-05 21.6 0.4 3 42 330 373 328 377 0.94

4 6 5.1e-13 3.7e-10 38.8 0.0 1 45 383 428 383 429 0.97

5 6 3e-11 2.2e-08 33.2 0.1 4 43 439 478 437 480 0.97

6 6 4.6 3.3e+03 -2.6 0.0 6 17 531 542 528 543 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	0.016	11	5.3	0.1	3	18	169	184	168	186	0.93
2	6	4.1e-14	2.9e-11	42.4	1.1	2	45	275	320	274	321	0.95
3	6	1.2e-07	8.8e-05	21.6	0.4	3	42	330	373	328	377	0.94
4	6	5.1e-13	3.7e-10	38.8	0.0	1	45	383	428	383	429	0.97
5	6	3e-11	2.2e-08	33.2	0.1	4	43	439	478	437	480	0.97
6	6	4.6	3.3e+03	-2.6	0.0	6	17	531	542	528	543	0.82

Sequence Information

Coding Sequence: atGTCATCTAATGaagataatgatgataatgatttagtcaagatattattattagaaagtaTAATATCGTTCAAATGTGAAGATGAAGATCAGTTTGAAAATActtctaatataaatgatattgaattaattattaataattcagaagtatctattaaaaatcaaaaaagtatattagaaaaaaaatatgaaactgaagataattttatggaatacaatattgaaaattataacaatacattacattttaatagacAAATAGTCTCCTCTTTGTTAGATTTAAAGAGACATGTAACCTTTGCACTTCAAAAATgtgaacgaaaattaaaagcaatagaaaaaaatttacaaaaacatGCACTTGGAgacacaaaaattttaatttgcaatgCTGGTATGCCATATTTTaaggataaatattatttttttgctcctaataatgaagatgaaatattaaaagaaaacagTAAAGAATTACAACTAAGAAATCTTCCTAAAGTTTCTTCAtggacaaaaaaagaaagagatatgcTTTTAAAAGCAATACAAAAGGAAGCCATTTCAGATGTATTatgtattcaaaaaatagaatgttcaaaacttaataataaaatgtttaaattaaaaactaaaaatgatGATAAGAAAGAAGTGAAAACAGAATTTCtacctaaaaattttttagaaatgattaaatcaaaaaaattacaggaaaaagaatttgattggtttaaaatatcatctacttattttgaagatattcATTCTCCACTTGATTGTTCTGTCATGTGGAATGTTTTTCTTCAAcctgatattaataaaagtcaTTGGACAAAATCAGAAGATATCAAACTTaggaaaattgtgaaaaaatataaatttcaaaactgGGACAAAATTGCcaaagaattaaatacaaatcgtACTGCATATCAatgttttattagatataatacaacaaaaaaattacccaaaattagaaattgcaCTTGGGAAAATGAAGAAGACGAAAGACTtctgaaattaatagaaatatttaaagttggTGATTTTATTCCTTGGGGTGATGTAGCTAGTTGGATGCAAAATAGAACTAAACAACAAGCATATTTCCGATGGACATACAGTTTAACaccatatttaataaaaggcAGATTTActaaaattgaagataatattCTGAAAGATGCTGTCATCAAGTATGGTacaaattttcgtaaaatatcaGCTGCATTAATGCCTAATAGATCCACTGTTCAACTTCATGATCGTTATCAAACATTAACTATCAATCAAATTGAAAACTGGAATTTATGGACATTTGAAGAAGATACAAAATTACTCAATCTTTTTGAGAATATTGGTCCAAATTGGTCTATGATTGCTAAAcaattttcaagtaaaaataGAACTCAATTAAGACATAGATATAAAGCtttacagaaatatattaaaagaggTGTCTCTTTATTTGAATTACATAAACATcatttttatgaagaaaatgaaaaagaaaaagaacaaaaaaaagaagattcttttaagaatatttttaaatctaataataatattgatagtaACGATTATGACAATgatttggataaaaaattaattgaatattttcatacaaggcataaaatagaaaaattgatacataaatgtaaatttcataatatggagaaattacaatataatacaacaaatttatataatattttacaaatattaaatgccAAACTTTATATTCCAAATGATACCAgtgacataaaattaaatgataggGATCAAGAGCTATTACATTCATTAagggattttataaaattaaaaaatgataaaaaaaagtactttgagacaataaacaaatatatatcacgCATGTTTGGTATGGATGAAACTAAAGATTCACATTTTGTACCTCCACCTCCATTTGATTcacagataaaattaaaaaaatcaaaaaaaagtcaatgtattgattataatttaaatgcgaaaaataattttttgcttgAAAAACCTACAAGTTTTAATACTCCAGATattgtaatttcatatattggtGGCAATGAAGAGgaattacaatttcaaaaacttagtcgtttatttgaaattaataattcaagatatgaacaaatatttaaaactcaaAACTGTTCTAAATTTCCAgcaaaaatgatattacaaggacatattaataatgacaGTGATAAGAAGAATTcaacaaatgataaattattagaaaaagtgGAATCAATTACTCTTTTTGACATTGgTACTGAAACACATGATGTTGAAAAACATGATATACCTATGATATATGCTAGTCATGCAACTTTAtcaagtttcaaaaatttaatgtatttgaaacgattgaatgaaaaatataatcctgGTTTATCAAAAATCGTTTTGCCTGAAGTTTATGTAATGGAtacgtttttatataatgatattacaccaaaaagaaaaatttctaaaatatcatatacattagataaacataaaacaaaaaaattaagaatgttaagtgaaaataataaaaaaataagatga
Protein Sequence: MSSNEDNDDNDLVKILLLESIISFKCEDEDQFENTSNINDIELIINNSEVSIKNQKSILEKKYETEDNFMEYNIENYNNTLHFNRQIVSSLLDLKRHVTFALQKCERKLKAIEKNLQKHALGDTKILICNAGMPYFKDKYYFFAPNNEDEILKENSKELQLRNLPKVSSWTKKERDMLLKAIQKEAISDVLCIQKIECSKLNNKMFKLKTKNDDKKEVKTEFLPKNFLEMIKSKKLQEKEFDWFKISSTYFEDIHSPLDCSVMWNVFLQPDINKSHWTKSEDIKLRKIVKKYKFQNWDKIAKELNTNRTAYQCFIRYNTTKKLPKIRNCTWENEEDERLLKLIEIFKVGDFIPWGDVASWMQNRTKQQAYFRWTYSLTPYLIKGRFTKIEDNILKDAVIKYGTNFRKISAALMPNRSTVQLHDRYQTLTINQIENWNLWTFEEDTKLLNLFENIGPNWSMIAKQFSSKNRTQLRHRYKALQKYIKRGVSLFELHKHHFYEENEKEKEQKKEDSFKNIFKSNNNIDSNDYDNDLDKKLIEYFHTRHKIEKLIHKCKFHNMEKLQYNTTNLYNILQILNAKLYIPNDTSDIKLNDRDQELLHSLRDFIKLKNDKKKYFETINKYISRMFGMDETKDSHFVPPPPFDSQIKLKKSKKSQCIDYNLNAKNNFLLEKPTSFNTPDIVISYIGGNEEELQFQKLSRLFEINNSRYEQIFKTQNCSKFPAKMILQGHINNDSDKKNSTNDKLLEKVESITLFDIGTETHDVEKHDIPMIYASHATLSSFKNLMYLKRLNEKYNPGLSKIVLPEVYVMDTFLYNDITPKRKISKISYTLDKHKTKKLRMLSENNKKIR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00141165;
90% Identity: -
80% Identity: -