Amei006233.1
Basic Information
- Insect
- Apis mellifera
- Gene Symbol
- ct
- Assembly
- GCA_003254395.2
- Location
- NC:17106794-17148451[-]
Transcription Factor Domain
- TF Family
- CUT
- Domain
- Homeobox|CUT
- PFAM
- PF02376
- TF Group
- Helix-turn-helix
- Description
- The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.3e-27 6.2e-24 82.9 0.0 2 72 517 588 516 593 0.95 2 3 1.4e-32 6.5e-29 98.9 0.0 3 77 920 995 918 997 0.96 3 3 5.7e-31 2.7e-27 93.7 0.0 3 75 1161 1234 1159 1238 0.95
Sequence Information
- Coding Sequence
- atgtatgtatgtatgtatgtatatatatatgtatatatatccgtTGGAAAGGAGAAGCAAATGCTCGACGGACTGGATTGCACGGGAAGCGGCGGGGTGACTGTGAATAATTCGAGGGGGCGCGCCGATGATTCCACATCTCGAGCGGAGAATCGGGTGAGTGTACGATGCACCGATTCCGGGACgggaaattatcgaattaatttacgaggaggaggagggATCGGTCAACTGGTGGAGGAGGTGTCCAGGTTACAGCAGAGCCTGCAGCGTCTCCAAGAGACGAGCGCACAGGCGACCGCTCGGCTCGAGGAGGAACTGGAGGCGCGCAGACAGCACATCAACAGACTGGAGAGCAAACTGGAGCGGCAGAGGGACTACGACGACCTGAAGCGCGAGATAAACGCGCTAAGGTCGGTCGATCTCTCCCAGATACCAACCGGCGAACCTGGCAAGAGCTTGGAGCACCTTCTAATGGAACGCTCGAAGGCGCTTCAACAGACCGAGAGCTTGAAGCCATCCAACACCCCGGACGCGCTCGGTGGGCTATCGTCACCCCTGCAGCGCGCCTCTACCGCCTCGCCCCACGGGGGTGTCGGGGGTGTGCCGCCTTCGTCCCACGTGTCCTCCCAGCAACCACCGCCTCCACCCCCGGCAGCAGTCTCCCTCCCCCCGCGCTCCACACCCACGCCCTCCTCGGCCACCTCGACCACGTCCAGCCtcctcttcccccctcccctgcaAAACGTCGAGACGTTCGGCTCGTTCCTCGGCGAAGAGATCGTCGCCAACTGGAGGCGGACGTTGGAGAGGTCCATCATGAatcaacaacagcaacaacagcaacagcaacaacaatcGAATCCGTTGAGTCAATTGtcgcaacaacagcaacaacagccGCTGATCGGCCTACACCcgcccaccaccaccaccacagCCGCGAGCAGCGGCCTCAATCATCTTCCGTCGCCCACCACCGACCCCTCGTCCAACAGCTCCAACACCCCCGCCAAATCGAACACCCCCCTGGGGACGACCCCGCTCAGTTGCCTGGACGCGGAGAAGGCGCCGACCCCGGTCTCGGGCCACGAGACCCCGGCGCCCCCCACGCCATCCTCAACGACGGCGTTAACGTCCCCGCCGAGCTTTCAACCGCCGACCTCCGTCGTCGAGACCGCCGTCAACGGCGCAACCCTCACGCCCGCCGCCCTTGCCCCGGCGCCGCCCCCCAAGAGCCCGCCCGACCAGGAATCTTGccacaacaataataacaacaacaacaacagtcATCATCTGgccaacaataacaacaacaacaacaacaacaacaacaacaataataataatagtataggGGGGTTGAGCGTGCTGGACACGCTGAAGAGCCCGTTCCGGTTCGACGAGAGGACGCATCCGTTTCGATTCAGCGACGAGTTCGGGGCGACGGGTATGCCGGTGAGATTGGGCGAGTCCCTGATCCCGAAGGGGGACCCGATGGAGGCGAGGCTGCAGGACATGCTGCGTTACAACATGGACAAGTACGCGTCCCAGAACCTGGACACGTTGCACATAGCGAGGAAGGTGAGGGAGCTGTTGTCGATACACAACATCGGGCAGAGGTTGTTCGCCAAGTATATACTGGGGCTGAGCCAGGGGACGGTGAGCGAGTTGCTGAGCAAACCGAAGCCGTGGGACAAATTGACGGAGAAGGGGCGAGACAGCTACAGGAAGATGCACGGGTGGGCGTGCGACGAAAACGCTGTAATGCTGCTTAAATCTCTGATACCGAAGAAAGAGTATGTTTCAGGCAAGGAGCAGGGAATGCCAGCGTTCGCGCGTGGCCCGCAGGAAGGTGGCCCACCTGAGATGAGTGACGAGAGGTTGGCGCACATTCTCTCGGAATCGGGCCACTTACAAATGAGAAGTGAGCACGAGGTGTCGAACGACGCGGACAGCAAAAGTCCGAATAGAATCGGTTGTCCGAGCCCGTTTAACAAAGAGAGGCTCGACAGTCAAAACAGGAGACTGAAGAAATACGAGAACGACGACATTCCGCAAGAGCAGGTAGTGAGGATTTATCAGGAGGAGCTGGCCAAAATAATGGGGAGAAAGGTGGAGGATACGCGTGGACCCAGAGAGTTTTCTTCCAGTGGCGCTATGTTCACGCACTTTTTCAGCGGCACGCAGGAGGATTTCCGGCTGGCACTTGGCGCGTACCACCGTGAAATGCAGAAACTGAACGCGACACCGGGTCAGAGCCCTTCGCTGAGCGGACTGCCGGGATTGGCCGGGCTGCCCGGCCTGTTGGCGCTTCAGCAGCAAGCGCTTCAGCAGCACCACCTCGCGACGAACGGCGGCGGTGTCCAAGATCTGAGCCTGGGCAAGGTGCAAGATCCGAGGGGGAAGATGATAAACGGGGTtacggaggaggagaaggagaagatggAGGAAGCGATGCGACACGCGGGTAGCGCTTTCTCGTTGGTGAGGCCGAAACAGGAAGCTTCGACGGCGCCACAGTCGACGCCAGGTGGATCAAGCGCGAGTTCGCCGCTCGGCAACTCGATACTTCCACCAGCGATGACACCTAGCGAGGAGTTCTCGGGTGCAGCGGCGGCTAGCCCTCTTCAGAGGATGGCCTCCATCACGAATAGTCTGATCAGTCAACCGTCCACGCCTACCCACCACACGGCCAACCAGAGGCCGCTCAAAGCGGTACTTCCACCCATCACTCAACAACAGTTCGACCTGTACAATAACTTGAACACGGAGGATATAGTTAAGAGAGTGAAGGAACAATTGTCTCAGTATTCCATCTCGCAACGTTTGTTCGGCGAATCGGTGTTGGGCTTGTCTCAAGGATCCGTGTCCGACCTGTTGGCGCGTCCGAAACCGTGGCACATGCTTACGCAGAAAGGCCGCGAGCCGTTCATCAGGATGAAGATGTTCCTCGAAGACGACAACGCGGTTCACAAATTGGTGGCGAGCCAATACAAGATCGCCCCCGAGAAGCTGATGAGGACCGGCGGCTACGGTGGCCTGCCTCGTAAGTTTAACTCAGCGTGCGGGACGCCGATGAAGCCGATGCCACCCACGAAACTGGTCCAGGAACAGCTTCAGAACGCGGCGAAGGCGCAGGCGGCGGCGCAGGCTGCGGCCCAGGCGGCGGCGGCCCAGCACCAGCAGGAGAAccaggcggcggcggcggcggcggcggcggcgatgCAGCTCGGCCCCCCTCAGCAGAGCCCCCAGCACCCCCAGCACCCCCAACCACCGCCGCCGATGATGCTGACCCCGCCTGGCCCCCACCACCCCCACGCCCAGCTCAGCATGCAGGAGCTGCAGAAgaagcagcaacagcagcaacagcagcagatGAACCTGCACTCCCCCCACCACCAGATGGCTCCCTCGCCCCTCCGCGGCCTCCATCCCCACATCTCGCCGAGCGTGTACGAGATGGCGGCACTGACGCAGGACCTCGACACGCAGACGATCACCACGAAGATAAAGGAGGCGCTGCTTGCGAACAACATCGGGCAGAAGATATTCGGCGAGGCAGTCCTCGGGTTGTCGCAGGGCTCGGTGAGCGAGTTGCTGAGCAAACCGAAGCCGTGGCACATGCTGAGCATAAAGGGACGGGAACCGTTCATCAGGATGCAATTATGGTTGTCCGACGCTCACAACGTCGACCGGTTACAGGCGCTGAAGAACGAGCGCAGGGAGGCGAACAAGAGGCGGCGCAGCAGCGGCCCGGGCCACGACAACAGCTCGGACACGTCGAGCAACGACACGGCCGAGTTCTACCACGCGGCGTCGCCCGGCCCTGGCCCCGCCTCGGCCAAGAAGCAACGGGTCCTCTTCTCCGAGGAGCAAAAGGAAGCGCTGAGGCTGGCGTTCGCCCTCGACCCGTACCCGAACGTGGCGACGATCGAGTTCCTCGCGGGCGAGCTCGCCCTCTCCTCGAGGACGATAACCAACTGGTTTCACAATCATCGGATGAGGCTGAAACAGCAGACGCCCCACGGCCAGCCCGAGCCTCAATCGCCGAGGGAGCCCGGCCAACCGTTCGACCCTGTCCAGTTCAGAGTATTATTAAACCAAAGACTGTTCGAGATCCAGAAGGAGAGGTTGGGCCTGGGCAACGTCCCCCTACCCTACACCCCGTACTTCAACCCGAACCTGGCCGCATTGGTGGGGAACGCGTTGAAGGAGCAGTGCTCGGGCCTCGACCTGTCCATGAACGCTTTGAAGAGGGAGCCGAACCAGGAGTTCGAGGACGAGGACGCGGAGGACGCGATGAGCAACCTGGGCAGCGAGGACTCGGAGGAGGGGTCGGCGGGCAGCATAAAGCGGGAGCCGGCCGAGACGCCGACGGCGCCCACCGCGGTCAGATCGAACAGGAGGAAGCCTGCTGCCCCCCAGTGGGTCAACCCCGAGTGGCAGGAGCCGGCAAGGGGGGCGGGGGACGAGGTGATCATAAACGGCGTCTGCGTGATGCAGACCGACGACTACGGGGTGAAGAGGGAGGCGGAGGAGACGATCAGGGTGGAGCCGACCCCTGTCCAGGACAGATACGAGGAGGACGCGCAGAGCGACGTGTCCTCCGTGTCCGGGAACAACGGGCAGGATCGGGACAGCCCTATGCCCAGCCCCAAATCGGGCCAGAACAGCCCTGCCCCGTCGCCCAGGCCGCCCTCCGCGCACCAGACCCAACAGTCGAACGAGGGGAGCCCGAAGGAGAGCGTGGTGAAACACGAGCCAGAAGAAACGTGGGATTATTAA
- Protein Sequence
- MYVCMYVYIYVYISVGKEKQMLDGLDCTGSGGVTVNNSRGRADDSTSRAENRVSVRCTDSGTGNYRINLRGGGGIGQLVEEVSRLQQSLQRLQETSAQATARLEEELEARRQHINRLESKLERQRDYDDLKREINALRSVDLSQIPTGEPGKSLEHLLMERSKALQQTESLKPSNTPDALGGLSSPLQRASTASPHGGVGGVPPSSHVSSQQPPPPPPAAVSLPPRSTPTPSSATSTTSSLLFPPPLQNVETFGSFLGEEIVANWRRTLERSIMNQQQQQQQQQQQSNPLSQLSQQQQQQPLIGLHPPTTTTTAASSGLNHLPSPTTDPSSNSSNTPAKSNTPLGTTPLSCLDAEKAPTPVSGHETPAPPTPSSTTALTSPPSFQPPTSVVETAVNGATLTPAALAPAPPPKSPPDQESCHNNNNNNNNSHHLANNNNNNNNNNNNNNNNSIGGLSVLDTLKSPFRFDERTHPFRFSDEFGATGMPVRLGESLIPKGDPMEARLQDMLRYNMDKYASQNLDTLHIARKVRELLSIHNIGQRLFAKYILGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHGWACDENAVMLLKSLIPKKEYVSGKEQGMPAFARGPQEGGPPEMSDERLAHILSESGHLQMRSEHEVSNDADSKSPNRIGCPSPFNKERLDSQNRRLKKYENDDIPQEQVVRIYQEELAKIMGRKVEDTRGPREFSSSGAMFTHFFSGTQEDFRLALGAYHREMQKLNATPGQSPSLSGLPGLAGLPGLLALQQQALQQHHLATNGGGVQDLSLGKVQDPRGKMINGVTEEEKEKMEEAMRHAGSAFSLVRPKQEASTAPQSTPGGSSASSPLGNSILPPAMTPSEEFSGAAAASPLQRMASITNSLISQPSTPTHHTANQRPLKAVLPPITQQQFDLYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAQAAAAQHQQENQAAAAAAAAAMQLGPPQQSPQHPQHPQPPPPMMLTPPGPHHPHAQLSMQELQKKQQQQQQQQMNLHSPHHQMAPSPLRGLHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLSDAHNVDRLQALKNERREANKRRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPASAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELALSSRTITNWFHNHRMRLKQQTPHGQPEPQSPREPGQPFDPVQFRVLLNQRLFEIQKERLGLGNVPLPYTPYFNPNLAALVGNALKEQCSGLDLSMNALKREPNQEFEDEDAEDAMSNLGSEDSEEGSAGSIKREPAETPTAPTAVRSNRRKPAAPQWVNPEWQEPARGAGDEVIINGVCVMQTDDYGVKREAEETIRVEPTPVQDRYEEDAQSDVSSVSGNNGQDRDSPMPSPKSGQNSPAPSPRPPSAHQTQQSNEGSPKESVVKHEPEETWDY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01394913;
- 90% Identity
- iTF_00142378;
- 80% Identity
- iTF_00142378;