Amei000836.1
Basic Information
- Insect
- Apis mellifera
- Gene Symbol
- KDM5A
- Assembly
- GCA_003254395.2
- Location
- NC:10238688-10250395[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.4e-25 2.2e-22 78.3 0.0 2 89 109 192 108 192 0.94 2 3 2.4 3.8e+03 -2.5 0.1 49 81 823 853 820 858 0.65 3 3 6 9.4e+03 -4.1 0.0 49 64 1032 1047 1030 1052 0.76
Sequence Information
- Coding Sequence
- ATGGTATCGAGGTTCGACACGAACTTCGGATGTGAAGATTTTTTCGGGACTTATCGTTGCACCCAAGACATGGCTTGTGATCGTGGTGATTCGGACTTCGAGTTCATCATACCGCCAGAAGCGCCGGTCTTCGAACCGAGTATTGAGGAGTTTCACGACCCCCTTGGCTACATCGCAAAAATACGACCGATCGCAGAGAAGTCTGGCATTTGTAAGATCAAACCGCCGCCTaaTTGGCAGCCACCATTTGCTGTTGATgttgataaattcaaattcgttCCAAGAATTCAAAGACTAAATGAATTAGAGGCAAAGACTAGGATAAAGCTTAATTTCTTGGATCAAATTGCAAAATTCTGGGAACTTCAAGGttcatctttaaaaattcctcTTGTTGAACGCAAAGCTCttgatttatattctttacatAAGATAGTCACTGATGAAggtgGAATTGATACAGTAACAAGGGAAAGAAGATGggcaaaaattgcaaataaattggGTTATCCTTCTGGACGCAGTGTTGGAAGTAtactaaaaaatcattatgaaCGTATTTTATATCCATTTGATGTATTTAAACAAGGAAAAACATTGACAGATataAAAATTGAACCAGATTCTAATGTGAATGAGAAAAAAGATCGAGATTATAAACCACATGGAATTATATCACGTCAACAAATTAAACCTCCAACTGAGAAATTTTCACGCCGGTCAAAAAGATTTAGTGGTCAAGAAGAAAAACAGGAAGTATCTATTAAACAAGAAGAGTGTAAAGAAGAATGTGATTCTGATAATGATTGTAaagatggaattaaaaataaacaatatgatGATAAGGATAATAGTAaagaacttaaaaaattacaattttatggaGCTGGTCCAAAAATGGCTGGATTTAATaccaaagaaggaaaaaaatctaataaaactaGAGGTGTAAAACTTGTTTATGAAGTTGATCCAttggcaaaatatatatgtcataATTGTGGAAGAGGTGACAATGAAGAAAACATGCTTTTATGTGATGGATGTGATGATAGTTATCATACTTTTTGTCTTATGCCACCATTGACAGAAATACCAAAAGGTGATTGGAGATGTCCAAAATGTGTCGCTGAAGAAGTTTCTAAGCCAATGGAAGCGTTTGGATTTGAACAAGCACAAAGAGAATATACTCTTCAACAATTTGGAGAAATGGCTGATCAATTTAAAagcgattattttaatatgccTGTACATatggtGCCAACATCATtagtagaaaaagaattttggcGAATAGTTTCTTCAATTGATGAAGATGTAACAGTTGAATATGGAGCAGATTTACATACAATGGATCATGGATCTGGATTTCCAACAAAAACTagcgttaatttatttacatgtgATCAAGAATATGCTGAATCTTCATGgaacttaaataatttacctGTTTTACGTGGAAGTGTCTTAGGTCATATTAATGCTGATATCAGTGGTATGAAAGTACCATGGATGTATGTTGGAATGTGTTTTGCAACCTTTTGTTGGCATAATGAGGACCATTGGAGttattccattaattatttacattgggGAGAACCAAAAACATGGTATGGTGTTCCTGGTTCTCAAGCAGAAAGATTTGAACAATCAATGAAATCAGCTGCACCAGAATTGTTTCATAGTCAACCTGATTTACTTCATCAATTAGTTACAATCATGaatccaaatattttaacaaatgaaggTGTTCCAGTATTTAGGACTGACCAACATGCAGGGGAATTTGTAGTGACATTTCCAAGAGCATATCATGCTGGTTTTAATCAAGGATACAATTTTGCTGAAGCTGTAAATTTTGCTCCCGCTGATTGGCTTAAAATTGGACGAGAATGTATAACgcattattcgaatttaagaCGATTTTGTGTATTTTCTCATGATGAATTGGTATGCAAAATGTCATTGGATCCAGATTCATTAGATATAGGAATTGCAACTGCAACTTATCATGATATGCTTCAAATGGTAGATGATGAGAAAAAGCTACGAAAAAATTTGCTGGAATGgggTGTAACAGAAGCAGAACGAGAAGCATTTGAACTTTTGCCGGATGATGAGAGACAGTGTGAAGCGTGCAAAACAACTTGTTTTTTGAGTGCAGTTACATGTTCATGCCAAAGTTCTCAACTAGTTTGTTTAAGACATTTCACAGAACTTTGTGATTGTCCTCCAGAAAAACATACATTACGTTATCGTTATACTTTAGACGAATTACCAATTATgctacaaaaattaaaattaaaagcagAGTCATTTGACTCATGGGTAACAAAAGTAAAAGAGGCAATGGatcctgataaaaaaaatgataaaattgaattaaatgaattaaaagaacTTTTAAATGAAgcagaaagtaaaaaatttccagAAAGTGAATTGCTTACAGCTTTAACAACTGCTGTGCAAGATGCTGAAAAGTGTGCAAGTGTTGCACAACaacttttgaataataaacaacGTACCAGaaccAGACAATCTGTTGaaactaaatataaacttaCAGTAGAAGAATTAACTCTTTTctataaagaaataacaaatttatgttGTGAACTTAAAGAATCTGAtgggataaaatttatacttgatcaagtattacaatttcaaaaagaagCAGAAGAATTAGAATGTAAAGATGATTGTAATATTGAACAGTTAGAAAAATGCATTGACTTTGGAGATTCTATTTGTATTGAACTACCTCAACTTATACGTTTAAAGcatAAATTAGCACAAATACAATGGCTTGAAGAAGTAAAATCTATTCAAGAAGATCCAAAATCTATACATCGTGATGATTTagcaaaattaattgaaaagggTATGACAATGCCTCCTAacttaaatatagaaaatactcTTTCAGATTTGCAAGCATTAATGCTTGCAATTGATAATTGGGAAGAGAAAGCAAAGTTATATCTTCATACAAAAAATAGACAAACTATTGCATCTCTTGAAGAATTTATCCATGAAGCTGATAAGGTGGAAGCTTATTTACCAAGTCTAGATGTTCTTCAAGATACATTGAATAAAGCAAAAAATTGGACAAAAATGATAGAAGAGATACAAGCAAGAGATAACCTTCCATATTACAATACATTAGATGATCTAATTAAAAAGGGCAGAAATATTCCATTGCATTTAGATGCTCTTCCTATTTTAGAATCTACACTTTCACAAGCAAAAActtggaaagaaagaacagCACGAACATTCCTAAGGAAAAATTCACATTATACTTTAATGGAAGCTTTGTCACCACGAATTGGAGTAGGTATACAAGCGTTAAAagctaagaaaaataaaaatgaagattctGTAGGACCTGTCTTTGTCTGTGATACAAAATTGGATGATTCCAATGATTCGGCAACTATTGTAGCTGCGTTTAAATTAGCTGAACAACGTGAAATGGAAGCAATGCGAAatttaagagaaagaaatttaatgaaaactgAAATAGATGATTCAAGATATTGCGTTTGTCGTCGACCAAGGTTTGGACTTATGCTTCAATGTGAGCTTTGTAAAGATTGGTTTCAttcaAATTGTGTACCTTTGCCAAAGACATcatataaaggaaaatttccaatgtcaagggaaattaaatttttatgtccGTGTTGTTTACGTTCACGGCGACCACGGTTAGAAACAATTTTGGCTCTTTTAGTTAGTCTCCAAAAAATTCCGATTCGTTTACCAGAAGGTGAGGCATTACAATGTTTAACGGAACGTGCAATGAATTGGCAGGATCGAGCCCGACAAGCATTAGCTACGGATGAAATTTCATCGGCATTAGCAAAATTATCTGTGCTATCACAAAAATTAGTAGAAGCAGCAGCAAGAGAAAAGACAGAAAAGATCATCAGCAGTGAATTAAAAAAGGCAGCAAATAATCCTGAATTACATCAGAGAGTACAAGCAATAGCACCGCTTAGTGGTGTACATTCAGATGATAGTGCCCTTAGTACTGCGgatgatgatgatgatgttgTTACTATTGATGATGATGAACCGAGTTGTAGTACATTTAATAGTAATGAACATGCATATTCTTATAtaTCCAAAATTCAGCGTAAAACACAATCAAACGATACAACAGAAGTTGCTGTTGTACTTTCACAAACAGCAAGGTTACGTTTAGAAGAATTGATGATGGAAGGCGATTTATTAGAAGTTGCACTTGATGAAACGCAACATATTTGGCGTATATTAAGTCATACAAATAGTCCGAGTACAGTTCGAAAATATGCATCATATGAAGAAGTTCAAACTAATTTGAATCAAGATATAAAAGATGTTAAAAAACgcggaaggaaaagaaaatctgatgaatttgaattacTGAAAAAACTTGGAAGAcaaaaaatggaagagaaaaatttagctAAACGCAAAGGactacaaaaagaaaaaaaatcggcaGGTTCTCCAGTGCCTATAAAACGTGGACCTCGAAagATGAAACGCAAAGAAGGTGAAGAAGGTCCAAAGAAAAGAGGtggtaatagaaaaaaaactaaacaAGATACTTCAGATGAAGAAGATGATTGTGCGGCTGTCAATTGTTTGCGACCTGGCggtAGAGAAGTTGATTGGGTACAGTGTGATGGCGGCTGTGAAGGTTGGTTTCATATGCACTGTGTTGGATTAGATCGTACAGAAATTGCAGAGGAGGATGATTATATATGTAGTAATTGTAAGGAGGCAGAGCATAGCTCAGTGTCAAGAGCGCCAGATCCCCTAGCTGAATCATTAGGCCTGGATGCacttctttccctttctcaaTCTCAGGGATACCAGGGCACAGATAGTGAAGCAGACATTCAAGAAACCACATCCTTCGTCAGGACTTACTAG
- Protein Sequence
- MVSRFDTNFGCEDFFGTYRCTQDMACDRGDSDFEFIIPPEAPVFEPSIEEFHDPLGYIAKIRPIAEKSGICKIKPPPNWQPPFAVDVDKFKFVPRIQRLNELEAKTRIKLNFLDQIAKFWELQGSSLKIPLVERKALDLYSLHKIVTDEGGIDTVTRERRWAKIANKLGYPSGRSVGSILKNHYERILYPFDVFKQGKTLTDIKIEPDSNVNEKKDRDYKPHGIISRQQIKPPTEKFSRRSKRFSGQEEKQEVSIKQEECKEECDSDNDCKDGIKNKQYDDKDNSKELKKLQFYGAGPKMAGFNTKEGKKSNKTRGVKLVYEVDPLAKYICHNCGRGDNEENMLLCDGCDDSYHTFCLMPPLTEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSDYFNMPVHMVPTSLVEKEFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKTSVNLFTCDQEYAESSWNLNNLPVLRGSVLGHINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEPKTWYGVPGSQAERFEQSMKSAAPELFHSQPDLLHQLVTIMNPNILTNEGVPVFRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLKIGRECITHYSNLRRFCVFSHDELVCKMSLDPDSLDIGIATATYHDMLQMVDDEKKLRKNLLEWGVTEAEREAFELLPDDERQCEACKTTCFLSAVTCSCQSSQLVCLRHFTELCDCPPEKHTLRYRYTLDELPIMLQKLKLKAESFDSWVTKVKEAMDPDKKNDKIELNELKELLNEAESKKFPESELLTALTTAVQDAEKCASVAQQLLNNKQRTRTRQSVETKYKLTVEELTLFYKEITNLCCELKESDGIKFILDQVLQFQKEAEELECKDDCNIEQLEKCIDFGDSICIELPQLIRLKHKLAQIQWLEEVKSIQEDPKSIHRDDLAKLIEKGMTMPPNLNIENTLSDLQALMLAIDNWEEKAKLYLHTKNRQTIASLEEFIHEADKVEAYLPSLDVLQDTLNKAKNWTKMIEEIQARDNLPYYNTLDDLIKKGRNIPLHLDALPILESTLSQAKTWKERTARTFLRKNSHYTLMEALSPRIGVGIQALKAKKNKNEDSVGPVFVCDTKLDDSNDSATIVAAFKLAEQREMEAMRNLRERNLMKTEIDDSRYCVCRRPRFGLMLQCELCKDWFHSNCVPLPKTSYKGKFPMSREIKFLCPCCLRSRRPRLETILALLVSLQKIPIRLPEGEALQCLTERAMNWQDRARQALATDEISSALAKLSVLSQKLVEAAAREKTEKIISSELKKAANNPELHQRVQAIAPLSGVHSDDSALSTADDDDDVVTIDDDEPSCSTFNSNEHAYSYISKIQRKTQSNDTTEVAVVLSQTARLRLEELMMEGDLLEVALDETQHIWRILSHTNSPSTVRKYASYEEVQTNLNQDIKDVKKRGRKRKSDEFELLKKLGRQKMEEKNLAKRKGLQKEKKSAGSPVPIKRGPRKMKRKEGEEGPKKRGGNRKKTKQDTSDEEDDCAAVNCLRPGGREVDWVQCDGGCEGWFHMHCVGLDRTEIAEEDDYICSNCKEAEHSSVSRAPDPLAESLGLDALLSLSQSQGYQGTDSEADIQETTSFVRTY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00873598;
- 90% Identity
- iTF_00141055;
- 80% Identity
- -