Ador001782.1
Basic Information
- Insect
- Apis dorsata
- Gene Symbol
- -
- Assembly
- GCA_000469605.1
- Location
- NW:111641-113525[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.6e-11 1e-07 30.6 0.1 8 38 37 66 35 70 0.93 2 2 1.6 2.2e+03 -2.4 0.0 30 38 94 102 94 107 0.83
Sequence Information
- Coding Sequence
- ATGATTGCCCATTTCTCGCGCAATGTTCAATTCTTTCTCGAAGGACGACGGCATTACAATGGCGGGAGACCGAGGCCTAGGGAGCTCGAATTCGNACACGTGAAGTCGGCCATCGAGGCGGTGGCCAACGGGTTGTCGCTGAGGAAGGCGGCTAATATGTTCTGCATATCGAAATCTGTTCTTCATCGTTACAGTAAACTGGAGTCACGGTCGGTGGGATATCTCAACTGCCAGAAAGTCACCTATCCGTGCAAGAATTGCGGCAAAGTGTACAATTACTACTCCAGTTTGGCGAGGCATTTGAAGCACGAATGCGGGGTGGAACCGAAGTTTCACTGTCCACTCTGCCCTTACAGAACGAAGCACAAATCCAGCTTGAACACGCATCTGAACGGCAGGCATATGAAACTTTTGAGCGAATTTTACACTATGCCAAATGGGAACAAGCTGTCATCCACCATGGACACTGGGAATTAA
- Protein Sequence
- MIAHFSRNVQFFLEGRRHYNGGRPRPRELEFXHVKSAIEAVANGLSLRKAANMFCISKSVLHRYSKLESRSVGYLNCQKVTYPCKNCGKVYNYYSSLARHLKHECGVEPKFHCPLCPYRTKHKSSLNTHLNGRHMKLLSEFYTMPNGNKLSSTMDTGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00142117;
- 90% Identity
- iTF_00142117;
- 80% Identity
- iTF_00141468;