Ador001829.1
Basic Information
- Insect
- Apis dorsata
- Gene Symbol
- -
- Assembly
- GCA_000469605.1
- Location
- NW:234252-243951[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 6.5e-13 8.7e-10 37.3 0.0 1 39 534 573 534 577 0.90 2 4 5.3e-12 7e-09 34.4 0.0 2 39 589 626 588 629 0.94 3 4 7.3e-19 9.8e-16 56.3 0.0 2 45 644 688 643 688 0.97 4 4 8.3e-19 1.1e-15 56.1 0.1 1 42 695 737 695 738 0.97
Sequence Information
- Coding Sequence
- ATGCCGTGCGCCCTCAGCACGGAGCGCCGAATGCCATTTCACTTTCGTTGGGCTTCGCCGCGTAGGAGATCGGGCCCTGCCAGGAATTATCCTCTCGTTCTACGTGGTCGTAACCTCCTCGTACACGGTTTCGTCTGGCTTTTTCACGACGTCGACTCTACTAACGCCGATACCGCCTCGTTTTCTCGTCGTGACTTCTgcgcctcttcttcttcttcctctttttatttttttctttcgcttctcctcttcctcttctaccacctcctcttccttcatctttttcttttccttttccaactcctcttcctccgcctcctcttcctctttcttccttcctttatcctcttattcttctttctacgtcttttcctttttctttatttccttctttcttctctttcttctctatcAGCTATTCTAcctttaatttctcttctattttttcttcttttctcttccttttctttccccatttcaattctttctttatttgtttttcgctttgtttctattctttccttttttccttttttcctgcTCGTCGCATATGATCTTtcctttgtttatttttcaatcactcatcaaattttccttattcctttctttcttcttttttcctctcttcctaTTTCTTCCGTGTACATCTTTACACTTTCAACGAGGGATCATTCGTCCACGGAATATTGCAGTCAGTCACTGTTGAAAACAGCCGATCAACTAAAGATCAAAGGATTGTGCGAGGTGCCTGAAAGCAGAGACGGCCCACCCTCGGTAAGTTTGAGCTCACCGCCGAGAGAGCCTGGTACACCTAGGATAAATTTCACCAAGCTGAAGAGGCATCATCCGAGATACAAGAGGCCCAGAACGACGTTCGAGCCTCGTGCCACGGATTCCAGACATTACGATCGATACAAAGAGGAggaatcgaacgaaaattaCAATTGGGAGCATAAAGAGACCCACATAGACTGGCAACCCGAAGATGAAGAGTGCACGGAGGCAACAGCGGGAGCAGTAGTCTTGGAAACTTGCCAACGCAACAGTAACAATAGTACCATTACCACCGGCAACACCAGCACCACtagcaataataacaataataacaataataataacaacaacggCGCTAACGACAACGGCAACGGTAACAGTGCGAGCAATAACAACAACGgtgACATGTTTTGTCATACAGGCCTCGGACATTATGGCCATCATCCGGATCCCGGAGAGGTTGACCTACCACCTGAAACACAACCAACACCACCAAGTGCCACGTTGGTAGGCACTACGATTACCCATTTAAGAGACCCAGATCATCATTCCACAGACATTCAAAATTGTGACAgtgtaaaaatcaaattcgaaaCGTTGCATACGATGGATTCGTCGGAcacgatcgatatcgatagcCACATGTCGGATCGGGCGAGCGTTAGTTCAAAGAACGCGGCTGATAGTGATAATATGATGATGATCACACCAGAGTTACTTGGATTAATGCCCTCTGGAAGTTCTGTTCATTCGGATTCAGgcgaaaataattcaagaggGCATTCTGGACAATCCAGCTCTCATCACCATGGCTCAAAATCATGGACTCAAGAGGATATGGATGCTGCTCTGGAAGCCTTAAGAAATCATGATATGAGTCTTACGAAAGCTTCTGCAACGTTCGGTATACCCTCGACGACCTTGTGGCAAAGAGCGCATCGGCTTGGCATCGATACTCCAAAAAAGGATGGACCTACTAAATCATGGAGCGATGAGAGTTTAAACAATGCGCTTGATGCATTACGAACGGGCACAATATCGGCGAACAAAGCTTCAAAAGCGTTTGGCATACCATCGAGCACCTTGTACAAAATCGCGAGAAGAGAAGGCATCAGATTGGCTGCACCTTTCAACGCCAGTCCTACTACCTGGTCACCAGCTGATCTCGATCGCGCCCTCGAAGCGATACGTTCCGGTCAAACGTCTGTGCAAAGAGCCTCCACGGAATTTGGAATACCAACGGGAACGTTGTACGGTCGATGCAAAAGAGAAGGAATAGAACTTAGTAGAAGCAATCCTACACCATGGAGCGAAGATGCTATGACTGAAGCTCTCGAAGCTGTTaggttaggtcATATGAGTATTAATCAAGCAGCAATTCATTATAACCTACCGTACTCTTCTTTATACGGTCGTTTTAAGAGAGGAAAATACGAAGAACCAACGGTTGGTGAGATATCTCAAGACGGTAGCAGTCCCCATTTCCATCAAAGTCCAAGTCAAAATCATTCGTCTGCCGTACCGGATCAAATGCCGTATCAAGGCAGCTGA
- Protein Sequence
- MPCALSTERRMPFHFRWASPRRRSGPARNYPLVLRGRNLLVHGFVWLFHDVDSTNADTASFSRRDFCASSSSSSFYFFLSLLLFLFYHLLFLHLFLFLFQLLFLRLLFLFLPSFILLFFFLRLFLFLYFLLSSLSSLSAILPLISLLFFLLFSSFSFPISILSLFVFRFVSILSFFPFFLLVAYDLSFVYFSITHQIFLIPFFLLFSSLPISSVYIFTLSTRDHSSTEYCSQSLLKTADQLKIKGLCEVPESRDGPPSVSLSSPPREPGTPRINFTKLKRHHPRYKRPRTTFEPRATDSRHYDRYKEEESNENYNWEHKETHIDWQPEDEECTEATAGAVVLETCQRNSNNSTITTGNTSTTSNNNNNNNNNNNNGANDNGNGNSASNNNNGDMFCHTGLGHYGHHPDPGEVDLPPETQPTPPSATLVGTTITHLRDPDHHSTDIQNCDSVKIKFETLHTMDSSDTIDIDSHMSDRASVSSKNAADSDNMMMITPELLGLMPSGSSVHSDSGENNSRGHSGQSSSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALDALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTTWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTEALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPTVGEISQDGSSPHFHQSPSQNHSSAVPDQMPYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -