Basic Information

Insect: Apis cerana
Gene Symbol: zld
Assembly: GCA_029169275.1
Location: CM054912.1:10819316-10822603[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.0028 0.32 12.1 3.3 1 23 26 48 26 48 0.97

2 7 0.0013 0.14 13.2 0.0 2 23 225 247 224 247 0.97

3 7 0.0026 0.29 12.3 2.9 1 23 466 490 466 490 0.92

4 7 0.11 12 7.2 5.4 1 23 976 999 976 999 0.93

5 7 0.025 2.8 9.2 1.9 1 23 1005 1027 1005 1027 0.87

6 7 1.3e-05 0.0014 19.5 5.5 1 23 1033 1055 1033 1055 0.98

7 7 3e-06 0.00034 21.5 1.2 1 23 1061 1083 1061 1083 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.0028	0.32	12.1	3.3	1	23	26	48	26	48	0.97
2	7	0.0013	0.14	13.2	0.0	2	23	225	247	224	247	0.97
3	7	0.0026	0.29	12.3	2.9	1	23	466	490	466	490	0.92
4	7	0.11	12	7.2	5.4	1	23	976	999	976	999	0.93
5	7	0.025	2.8	9.2	1.9	1	23	1005	1027	1005	1027	0.87
6	7	1.3e-05	0.0014	19.5	5.5	1	23	1033	1055	1033	1055	0.98
7	7	3e-06	0.00034	21.5	1.2	1	23	1061	1083	1061	1083	0.98

Sequence Information

Coding Sequence: ATGAGTGAAATGACGAGTGTcgaacaacaacagcaacaacaacaacaatacgTAGGTGGCAGTTCTAATCCGGAGCATCATTGCAAGGATTGCGGTCTTTATTTCGAAAGCGACAAAAGTCTGGAAGTGCACCTGCGATACCATCAGGAGAACCTGCTAAGTCAGTGGGCGAACCAGGCGCAGCAAGAGGAGagtaacaacaacaacagtaAGGCTGGTAATCATAATAGTCACGTGGGTGTTAAACGCGATAGCGTGACCGCACCGGCGGACTCGAGCGAATCTTCCTCGAGACCGCCCTCCCAAGATCCTACGTCTTCTCAACAACCGACgcaacaacagcagcagcagcagcagcagcaacaacagcagcagcagcagcagcagcaacaaacTCACCACCAACAACAACAGACCTCTGGTCCGagttataatcattttcaaacgCCGATGTTCGGCGAGACGAATTACTTTATGCAGAACGATCAGGCCTACATCTTGCCCCATCCCCATTACGCATCACCGCCCAGAGAGGATACGCAAAACAGTGGTGGGGGTGGGGGCAGTGGCGGTGGAAGTTATTCGCGTTACCATCCGTACCAACATCAACAACATTTTCAACCGGAACGCACCAGTTCCGTAAGTTCCACCAGCCCGAGGAGCCCCCCTCTGCAATGTGACAAGTGCGGTGCGGTGTACGAGGACGCGAATCAATTGGGTGAACACGTGAGGACAAGCCATTCCAACTCGCCCGCCTCGTATCCCGGACAACATCAACAATATCAACAGTTGGGTAATAGTCCTCAGCAACAAAATCAAGCACAAATGCATCCGTCGCCACCGCAGCCCAaccaacagcagcagcagcaacaacaatcGGGTTACGATTACAACGGTGGGCAACCAGTGAAATTGGACGTGAAGCAAGAACCGGACGAACAGGCAGAAATTCTCGATTTGGATTCGCACAAGGTGCAGACTCACAGATACGAGGAAGAGTTGATGAGACTTCATCAGCAACAGCAACAGGAGTTGCACATGCAGATGCATCAGCAGCAGGTGATGCATCAACAGCATCAGCAGCAGCAACGCAGCGGATCGCATTCGGTGAGTTCCATGCTGGGTTGGCCAACGGCCGCGCAATCCCACGATTATCACGGGTTGTCGTCGATGGGTCCGATGGAAGGCGTCTCGCCGCTCTCCGATCAGAGTCAATTCATACGGGGGCAACACATGGGCGTGGAACCACCGCGGCATCCGGGGTCCCCCATTATCACGAGCACGCAACCGATGCCGGGCCACCAGATACCCGGCGGTCTATTGCAACAACCGCCCAAACCCCCCCCTTTGGCCAATCAATCGTGGAAAAGTAACGAGGCGCGGCGGCCAAAGACCTACAACTGCACCGCGTGCAACAAGTGGTTCACCAGCTCGGGCCATCTGAAGAGGCACTACAACACCACGTTGCACAAGAACGCGGTGAAACAGAGCAATCAACCGGACCCGGCCAACTTGCCGATCAGCGCTCATCACCACCCTGGTAGGGACACCCATTCCGGTGGCAGGACCGGAGGACCGCCATCTAGATCGCCGGAGTTATCCTCTTCCGGGAGTCCCCCAAACTTGATGGCAGGTCCCTCGGGCGAGGCGGCGAGGGGCCTGCTCCACACGCCCACCAGTCTCtacagcaacagcagcaacaacaacaattccaacaacagcagcagcagcagcagcagcgaatctgcggcggcggcggcggcggcggcggttcTAACCCAACAATCGGGTTCGGCGGTGCACTTGGGCTCAACAATGGTACCGCCGCTCAATTCTCCGGTCCAATCCCCGTTGGCGGGCCACCATCAGCAACAAATGGGTTCCCCGTCCTCTCAGCTGGGCCatcagcagcagcagcaacttCATCACCTGCCAATGGGTTCGCCGTCGGGCCACCAACTTCCGGCCCACCATCCCATGACTTCTCCCATATCGCCCATGCATCCACCGCCGGCACCCCACCTGAATTCCCCTTCGCCAATGGGCTCGTCCCACCCGCACCACCACATGAGTTCTCCATCTCCCATAACGCCGGCCTCGGTCCACCCAGCAATGGCTTCGCCCACAGCGATGGGGGGTACTACGATGCCTCATCAGCCGTACCCAAACGCCTTGCCCCCCCACGTTATAACTACTACCAACATCCCGGGCCTGCTGGAGTCTATCACCATCCAGCTAACTACTACTGGTAATGAGATGGACGAGTTACCGCTCTCCGGCCAGTCTCAACACCAGCACGAGCAACATCACCAGCAGCAACACAACCAACAGttgcagcagcagcagcagcaacagcaacagAATCATCATCACCAGCAGCAGCAATCTCAGGATGTTTTACCCGGTTTCGGGACCTTTAGCAATCATCAAAGGCCCCTTCCGAGCTTCACTCAGTTCAACGTGACCGGGTTTCTGATCGGCCAAAATCAAGCGCAGGCCGTTAACGTGGGGGGGCTGAATTCGGAGGAGAACGTGTCTCCTCAGGAACGATCGTTCGAATCGCCCGAATCGAATTTCATCCCGTATAGAACCTCGACGCCTCGATACGAATCCTTGGCCAATATGGATTCGCAAGCGGTGGACATGCAACCGAACACGGACGGTATGATCATCAAACAGTACCAATTTCAAACCCATCATCATTTGCCGCACTCGCTTCACCAGCCCCGGGACCATCACGAGGCGAACAACAATCTGCCGAGCAATAACTCGATGATTCAAGGGAAGGAGGAGTTGAATCCGAACGTCGGCAGACAATTCGAGAAGAGCAGCTCGTACAAAACGAAGGGCGGTACCGTGATCACCAAGGAACATCAGGTGACCAGTACCAACACCGGCTCGCACTACATTTCCCAGGACGGCTTTCACAAGTGCATCGAATGCGACAAGGTATTCAACAAGGCTTGCTACCTGACGCAACACAACAAGAGCTTCCACTCTGGTGACAAGCCGTTCAAATGCAATCAGTGCGGTAAGAGGTTCCCCCTCGAGTACCTGCACGCGGAGCACCTGCAGAAGCACGCCGGTGACAAGCCGTACAAGTGCGAGATATGTCCCAAACAGTTCAACCACAAAACTGACCTTAGGCGGCATTTGTGCCTCCACACCGGCGAAAAGCCGTACGCCTGTGATAATTGCGGCAAGGGATTCATCAGGAAGGACCACATGATGAAGCACCTCGAGACgcacaaaaagaaaaacaaccaCAACGTCCATCTTAGGGCGTGA
Protein Sequence: MSEMTSVEQQQQQQQQYVGGSSNPEHHCKDCGLYFESDKSLEVHLRYHQENLLSQWANQAQQEESNNNNSKAGNHNSHVGVKRDSVTAPADSSESSSRPPSQDPTSSQQPTQQQQQQQQQQQQQQQQQQQQTHHQQQQTSGPSYNHFQTPMFGETNYFMQNDQAYILPHPHYASPPREDTQNSGGGGGSGGGSYSRYHPYQHQQHFQPERTSSVSSTSPRSPPLQCDKCGAVYEDANQLGEHVRTSHSNSPASYPGQHQQYQQLGNSPQQQNQAQMHPSPPQPNQQQQQQQQSGYDYNGGQPVKLDVKQEPDEQAEILDLDSHKVQTHRYEEELMRLHQQQQQELHMQMHQQQVMHQQHQQQQRSGSHSVSSMLGWPTAAQSHDYHGLSSMGPMEGVSPLSDQSQFIRGQHMGVEPPRHPGSPIITSTQPMPGHQIPGGLLQQPPKPPPLANQSWKSNEARRPKTYNCTACNKWFTSSGHLKRHYNTTLHKNAVKQSNQPDPANLPISAHHHPGRDTHSGGRTGGPPSRSPELSSSGSPPNLMAGPSGEAARGLLHTPTSLYSNSSNNNNSNNSSSSSSSESAAAAAAAAVLTQQSGSAVHLGSTMVPPLNSPVQSPLAGHHQQQMGSPSSQLGHQQQQQLHHLPMGSPSGHQLPAHHPMTSPISPMHPPPAPHLNSPSPMGSSHPHHHMSSPSPITPASVHPAMASPTAMGGTTMPHQPYPNALPPHVITTTNIPGLLESITIQLTTTGNEMDELPLSGQSQHQHEQHHQQQHNQQLQQQQQQQQQNHHHQQQQSQDVLPGFGTFSNHQRPLPSFTQFNVTGFLIGQNQAQAVNVGGLNSEENVSPQERSFESPESNFIPYRTSTPRYESLANMDSQAVDMQPNTDGMIIKQYQFQTHHHLPHSLHQPRDHHEANNNLPSNNSMIQGKEELNPNVGRQFEKSSSYKTKGGTVITKEHQVTSTNTGSHYISQDGFHKCIECDKVFNKACYLTQHNKSFHSGDKPFKCNQCGKRFPLEYLHAEHLQKHAGDKPYKCEICPKQFNHKTDLRRHLCLHTGEKPYACDNCGKGFIRKDHMMKHLETHKKKNNHNVHLRA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00963437;
90% Identity: iTF_00142704;
80% Identity: -