Basic Information

Insect: Apis cerana
Gene Symbol: Zbtb3
Assembly: GCA_029169275.1
Location: CM054908.1:11131027-11132517[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 5 0.00066 0.075 14.1 6.3 2 23 120 141 119 141 0.97

2 5 0.00036 0.04 15.0 1.0 1 23 147 169 147 169 0.97

3 5 3.4e-05 0.0039 18.2 3.6 1 23 175 198 175 198 0.96

4 5 4.9e-05 0.0055 17.7 4.1 1 21 217 237 217 239 0.93

5 5 0.00022 0.025 15.6 3.9 1 23 245 268 245 268 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	5	0.00066	0.075	14.1	6.3	2	23	120	141	119	141	0.97
2	5	0.00036	0.04	15.0	1.0	1	23	147	169	147	169	0.97
3	5	3.4e-05	0.0039	18.2	3.6	1	23	175	198	175	198	0.96
4	5	4.9e-05	0.0055	17.7	4.1	1	21	217	237	217	239	0.93
5	5	0.00022	0.025	15.6	3.9	1	23	245	268	245	268	0.95

Sequence Information

Coding Sequence: ATGATGATGCATAAAGTAAATATGAAGTTATGTCGTCTTTGTGGCAAAGAAAAACAACAGGGTACAGATTTGTTTACAGACAAAGTTAAAGGAATTGTATTGATGtcacttataaataaatatttctccaaagagatgataaatatttcaaattctgatGCATTTTCTAAATATGTTTGTATTGATTGCgagcaaaaaatttatgtatttgatgaattttgtttaatggTAGCTAATGTACAAAAACAACTTGCAGCTCCATCTTTAGAAATTGATTTCGcagaaGATATGTTAcatcaattaaaagaaaatgatacagtatcaaaaaatatcttaaataaacaaataaaaaaaagtacatgCTCAATATGTGCTAAGAGTTTCAGATGTCAATCACATTTAAATAGACATAAACGCATTCATACTGGACAGAGACCTTTTGTTTGTAATatttGTAAAATGTCTTTCAATcaacaagaaatattaatgaaacataAAGAAAGACatgaaggaaaaaaacaatttcaatgtGCTAATTGTCATCAATCATTTCGTTATAAAGTTTCATTGAAATctcatatgataaattttcatatggaTATGGAACgatctattaataatcaaaatcttcaaatagataataattcatttatatgctCTGAATGTGGAAAACaatttgtaacaaaatataaattacaaagacATTCAAGATGCCATACTGGTGAGAAACCATATCATTGtactttttgtttaaaaacattttcacaAACAGGTAATTTAAAAGTACATCAGGTGAAATATCATCAAATACATGATTCTGTGACTGAAATAAGGCGACAGACTCAGTATAACAATCAAATAGTTGATTGTGATATACCtacaacattaaataattttcatgcaGTTAACATGTCAGAAATCGAAttacaaaatacaataaatgaaaCTATAAATTCTACAGagcaaaataattcatatgcaaaaatatacgaaaattctttatatattgatgATGAAATAGAAACGATTTTAGACCGTGATCTTGGTCAATTaggacaaaataaatattctacaaatatacaagataAATTACCACTTTGTTTAAAACAACCAGAAACTCCTGAATTATTGCATAGCTTATTATATGATGATGGCTAA
Protein Sequence: MMMHKVNMKLCRLCGKEKQQGTDLFTDKVKGIVLMSLINKYFSKEMINISNSDAFSKYVCIDCEQKIYVFDEFCLMVANVQKQLAAPSLEIDFAEDMLHQLKENDTVSKNILNKQIKKSTCSICAKSFRCQSHLNRHKRIHTGQRPFVCNICKMSFNQQEILMKHKERHEGKKQFQCANCHQSFRYKVSLKSHMINFHMDMERSINNQNLQIDNNSFICSECGKQFVTKYKLQRHSRCHTGEKPYHCTFCLKTFSQTGNLKVHQVKYHQIHDSVTEIRRQTQYNNQIVDCDIPTTLNNFHAVNMSEIELQNTINETINSTEQNNSYAKIYENSLYIDDEIETILDRDLGQLGQNKYSTNIQDKLPLCLKQPETPELLHSLLYDDG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00734172;
90% Identity: iTF_00142074;
80% Identity: -