Aaln089043.1
Basic Information
- Insect
- Aphrophora alni
- Gene Symbol
- GATA1
- Assembly
- GCA_963513935.1
- Location
- OY740779.1:37134821-37174373[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 4.5 5.4e+04 -3.8 1.8 20 26 12 18 9 19 0.78 2 3 0.43 5.2e+03 -0.5 0.1 22 27 57 62 54 65 0.79 3 3 2.5e-17 3e-13 51.4 4.3 1 35 417 450 417 451 0.97
Sequence Information
- Coding Sequence
- ATGCCTAACGTCCCAGATAAGTTTTACGAACTTTGTCGCCTTTGTTTATCGTGCAGTGGAGTAAAGTTGTCTATTTTCGATGATGAGGGAACACAACGCAACTATCCATTGAAAATAATGACGTGTCTTTCTATTTTGGTGTCTGAGCAGGATATGCTGCCTTCCAATATTTGTGAAGCCTGCATTTTTAAGCTGGACTTGTTTCACGAATTTAAAGAGAATTGTAGGAAATCTGAGATTATATTGAAACGATATATTACCAATTCTGATTATATGTCTAAAGATGCTCAGGAATACTTAAATGGTATTGCAGCGTTAGCATCAAGAGACCCAGAACCTACGAAAATAAACGATATCAACAAAGAACCggaaagaaaagatgaaataaaatatgaaccaAACGACGAACAAACGAATGGAATCTTAGACGATAAAATGTGCGATGATATAGATTCAGATGACGAAGGTGCATTGAGGATTGCCGAAAGCGAACCAGAGACTTCGTACTCTACGCAAGACGATTGTAAAATGGAAGAAGATGAGTTGCCGGGTAGACCTAGGATAAAATCTGAAATAATGTCTGAAGAGGATACGAGATCTGTTGACGAGGCGATGATGCAGGAATGTTTGTCTCACCAAGTGGACGGAGATAGTTCGAAACTTGCCGTTACTTCTCCGACTAAAAGtGAACCAAACAGTCTACTACGATCACTTATGTCGGGCACACCGCTTAACTCCAGACTTCCACTGCCTCAAGGATTTTGTTCATTTACTAAAGAGAATGAAGTGTTAGCCAATAGAACAAATCTGCCTACGCCCGTTGTTCAATTCACCACTGAGGGAGGGAGCCATAATAAATCAGAATCCCGCCAGAGCAGTGGGAGACGTAAGCAGAGTTGTCCTCTACGATCTACAGAAGTGCCCTTTCTTAACCAGAGTTCTCAAAGTTATcctttacataataataatggCAGTTATAATGGAGTGACAATAACGCCTGTGGATCCACATAGTAGATCTCGTGAAGCTATCTCTCGTCTTTTAGAAGCAGCACATTATacagagagagaagagagaggtTCTGGTAGTCCTGATACAGGAGGAGAGGGTGCTGATGCAGATGCTGAGGAAGATATTGAGGAAGTGGAAGTTTCAGGGGGCGAGGACCAAACGAATAGTTCTTGGTGCGGTGCTGCGGTGTTTAGACCTGGGCGGCAACCTTCGCTTGCGAAGAGAGTCGACCTAGCTTGTAGTAACTGTGGTACACGAACAACAACAATATGGCGTAGAAATCCACTTGGTGAGATGGTATGTAATGCATGTGGACTATATTTCAAACTGCACAATGTCAACAGACCAGCGACAATGCGTAGGGATACGATACACACACGACGGAGGCGACCTAAAGGTGATAAACCGCCAAGGAGTAGtaaaaAAGCCAACAGTGAATGTACGAGCGGAGGAAACAGCGGCAGCGAAGAATGCGACGACATGTTAGTCGCATTACGGCGTCAAATACAACCTCACCTAATGTTAGCAGCGTTACAGCAGTCCTCATCATACGCGTTAGCACAACAACAGCAAACGCAGCAGCAACAACAACAAATGCATCATGTACGTAGTTTTAAAACTGAACCTAATGACGAGGCACCTTTGAATCTCGTCGCAGGTGGTCAATAA
- Protein Sequence
- MPNVPDKFYELCRLCLSCSGVKLSIFDDEGTQRNYPLKIMTCLSILVSEQDMLPSNICEACIFKLDLFHEFKENCRKSEIILKRYITNSDYMSKDAQEYLNGIAALASRDPEPTKINDINKEPERKDEIKYEPNDEQTNGILDDKMCDDIDSDDEGALRIAESEPETSYSTQDDCKMEEDELPGRPRIKSEIMSEEDTRSVDEAMMQECLSHQVDGDSSKLAVTSPTKSEPNSLLRSLMSGTPLNSRLPLPQGFCSFTKENEVLANRTNLPTPVVQFTTEGGSHNKSESRQSSGRRKQSCPLRSTEVPFLNQSSQSYPLHNNNGSYNGVTITPVDPHSRSREAISRLLEAAHYTEREERGSGSPDTGGEGADADAEEDIEEVEVSGGEDQTNSSWCGAAVFRPGRQPSLAKRVDLACSNCGTRTTTIWRRNPLGEMVCNACGLYFKLHNVNRPATMRRDTIHTRRRRPKGDKPPRSSKKANSECTSGGNSGSEECDDMLVALRRQIQPHLMLAALQQSSSYALAQQQQTQQQQQQMHHVRSFKTEPNDEAPLNLVAGGQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -