Basic Information

Insect: Aphrophora alni
Gene Symbol: Mtf1
Assembly: GCA_963513935.1
Location: OY740775.1:85560282-85584980[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 6 8.8e-06 0.003 20.2 0.8 1 23 116 140 116 140 0.99

2 6 7.7e-05 0.026 17.3 0.2 1 23 146 170 146 170 0.97

3 6 0.00045 0.15 14.8 0.5 1 23 176 200 176 200 0.94

4 6 4.7e-05 0.016 17.9 1.9 4 23 210 229 209 229 0.96

5 6 1.8e-05 0.0059 19.3 3.2 1 23 235 259 235 259 0.98

6 6 5.3e-05 0.018 17.8 0.9 2 23 266 289 265 289 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	6	8.8e-06	0.003	20.2	0.8	1	23	116	140	116	140	0.99
2	6	7.7e-05	0.026	17.3	0.2	1	23	146	170	146	170	0.97
3	6	0.00045	0.15	14.8	0.5	1	23	176	200	176	200	0.94
4	6	4.7e-05	0.016	17.9	1.9	4	23	210	229	209	229	0.96
5	6	1.8e-05	0.0059	19.3	3.2	1	23	235	259	235	259	0.98
6	6	5.3e-05	0.018	17.8	0.9	2	23	266	289	265	289	0.94

Sequence Information

Coding Sequence: ATGGATCAAACCAGTTCTTCTCCAAACGCAATTACAGTATTTACGGAAGGGATACAGGATTTTATTTTCGGAAGCGATTGTTTGGAATTTCCAACTTTGGAAGGAGCAAATGGTCAAACTGTTGCTTACAAAGAGTCGGAAAACAATAACAGGACTGTAATAATCGCAAAATCTGATGTAAATAAACAATCCAAACATGATCATCGCAAAGCTAGTAAGTCTATTGATAAAGTTCAAATGCATATTGATGTTGATGGTACAACAATGGATCGAGGATATTCACcccattataaaataattatcgatTCTAACAGTTTTTTAAAGCAACAAACTCATGTAAAACGATATCAGTGTGAATACGATGGCTGCTCAAGAACTTACAGCACTATTGGAAATTTGCGAACACATATGAAAACGCATAAAGGTGAATTTCGTTTCAAATGTGCTGAACAAGGTTGTGGAAAAGCATTCCTTACGTCATACAGTCTGAAGATACACATCCGAGTTCATACAAAGGTGAAACCGTTTAGCTGTGCACAAAATGGATGTGAAAAGGCATTTAATACTCTCTACAGGCTTCGGGCACATCAAAGGTTGCATAATGGTGATACATTCAACTGCATACAACATGGCTGTACCAAATATTTTACCACTTTGAGTGATCTTAAAAAACATATACGTACACACACACAGGAACGTCCTTACAAATGCGTAGAAGATGGTTGTGGTAAAGCGTTTACTGCCAGCCATCATCTCAAAACACATAGACGAACACACACAGGGGAACGTCCATTCCTATGTCCACAGAATGGATGTCACAGAACATTTGTAACCAAGAACAGTCTTTTAGCTCATATCAAAATTCATGAGGGTTCAGAATTGAAGCAGGACGGAGACGATGTGTCAGAAGATGGGTATGATTCTTCCTCTGATCAAGAAGGGACTACTGAACAATcaaacattaatgctaaaactcCTCAGACCGAagaTGAATTGGTTTCAATAGTTCCTACCACTACAACTGTAACAGAAAATCCTGACAGGTTAATTACTCCGGTCAACCATCAGTATGATTCTAACACTAAAGAAAAACCTAATATATCTCAAGAATTTTCCTTAGCATCGGGTAACTCAAATACATCTGTTATTAGTAGTATGTTTAGTATACGGCCATCAGATTTAGATTTAGCAACAAATATAGCCGATGATTCATTTACTGCAAACAAATCTCGACATGATTTAATCAacggaaatttaaatttaattaagtgtcTTAACGTACCAaatgatacaaatatatttggtAGTATGGATAAAGAATTGAATGATATGTTGTTAGTTGAAGATTTGTTAGGAAGTATTGCTGTACCTGTTTCGAACGATCTCGGATCATCTTTAATGTTAAAAGATTCTGTAAAAAACGTTAATAATCCGgttcaatcaaaattaaaagaattggATTTAGGTAGGACTGTGTTATTAACAGAAGATGGAGATCATTTGGATGTACAGTTGGATAGAATGTTGATGGATTTACCTAAATCAAATGACGGAATGGAACAAATCGAAGGAATGGTTGTCAGTCCACAATTGGATATTTTAGAAATGCAATGGCGTGAATTACAAACTACTGATAAAAATGTTAACCAACTCGAATCGGACAAAACTATGATTTTACCTACTATAAATGATGATTTAAATCTCACTAAACCTAAAAACTGTGAGTGTAATGAATGTTTTTGCGAAAGTGATAGTACATCTCAAAGTTCCTCGAAAATGCAACCCACATCTACTAACATACAGTCGATAAATTCAACCATTTCAATAGATTCTGTGACACAGAATGATTTAAATCAATCTAAATCTAACAGTTGCGAATGTAATGAATGTTTTTGTGAAAGTGATGACACGTCTTGCCAAGATTGTAACGGTACAAGAATGCAATATGAATCTGCTGATATGCCAATACCTCATTCTCCGAAATTAACCGATCCTATAATGACAGATAATTCAGATCTATTGGAAAACAATGAAATAGAAATGACAGATATATGGAAGAAATTAGAAAACAGCGATATTGTTAATGATGCAGTTGGTTTATTGAACGAATCAGACGGATTTTCACAAACGAAAGATTGGGAAAATTGGACGATAGGCCAAaatgtttcagaaaaaaataatttatccaacaaaacacaaacagaatttaatattacaaataattccaataatgTAAGAGTTAATCAGTTAATAAATTGTCAAGCTTATAAAGACGTGACAAATATTATCAATGAAAGTGCATCCAAACAGAAATGTGGATCACATAATTGTTCATGCAAAGGTGGAAAGAAACCTACTTCTGAATCATGCTGTGTTACAGTCTGTCTGCAGAcattaaagcaaataaaaagaGTGTTAGAAGGAGGATGTTGTAAAGGAAGTCTTATAGGGACAAATTCACTCGCTGTAGCTTTGGGTTTACCCATGACTTCCTTACCAGTTACAAAATGCTGTTTAGTCAATGAATAG
Protein Sequence: MDQTSSSPNAITVFTEGIQDFIFGSDCLEFPTLEGANGQTVAYKESENNNRTVIIAKSDVNKQSKHDHRKASKSIDKVQMHIDVDGTTMDRGYSPHYKIIIDSNSFLKQQTHVKRYQCEYDGCSRTYSTIGNLRTHMKTHKGEFRFKCAEQGCGKAFLTSYSLKIHIRVHTKVKPFSCAQNGCEKAFNTLYRLRAHQRLHNGDTFNCIQHGCTKYFTTLSDLKKHIRTHTQERPYKCVEDGCGKAFTASHHLKTHRRTHTGERPFLCPQNGCHRTFVTKNSLLAHIKIHEGSELKQDGDDVSEDGYDSSSDQEGTTEQSNINAKTPQTEDELVSIVPTTTTVTENPDRLITPVNHQYDSNTKEKPNISQEFSLASGNSNTSVISSMFSIRPSDLDLATNIADDSFTANKSRHDLINGNLNLIKCLNVPNDTNIFGSMDKELNDMLLVEDLLGSIAVPVSNDLGSSLMLKDSVKNVNNPVQSKLKELDLGRTVLLTEDGDHLDVQLDRMLMDLPKSNDGMEQIEGMVVSPQLDILEMQWRELQTTDKNVNQLESDKTMILPTINDDLNLTKPKNCECNECFCESDSTSQSSSKMQPTSTNIQSINSTISIDSVTQNDLNQSKSNSCECNECFCESDDTSCQDCNGTRMQYESADMPIPHSPKLTDPIMTDNSDLLENNEIEMTDIWKKLENSDIVNDAVGLLNESDGFSQTKDWENWTIGQNVSEKNNLSNKTQTEFNITNNSNNVRVNQLINCQAYKDVTNIINESASKQKCGSHNCSCKGGKKPTSESCCVTVCLQTLKQIKRVLEGGCCKGSLIGTNSLAVALGLPMTSLPVTKCCLVNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -