Basic Information

Insect: Aphrophora alni
Gene Symbol: ZNF236
Assembly: GCA_963513935.1
Location: OY740772.1:107517483-107563846[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0029 0.97 12.3 3.6 1 23 71 93 71 93 0.95

2 20 0.0017 0.56 13.1 0.1 1 23 99 121 99 121 0.94

3 20 5.5e-06 0.0019 20.9 0.1 2 23 127 148 126 148 0.96

4 20 0.023 7.9 9.4 0.3 5 23 158 176 155 176 0.93

5 20 3.3e-06 0.0011 21.6 1.9 1 23 190 212 190 212 0.98

6 20 0.00039 0.13 15.0 1.3 1 23 235 259 235 259 0.95

7 20 0.00013 0.045 16.5 0.4 1 23 265 288 265 288 0.97

8 20 7.8e-06 0.0026 20.4 1.0 1 23 294 317 294 317 0.96

9 20 0.0012 0.41 13.5 4.1 1 23 327 350 327 351 0.97

10 20 4.5e-06 0.0015 21.1 3.4 1 23 434 456 434 456 0.98

11 20 1.5e-05 0.0051 19.5 3.1 1 23 462 484 462 484 0.99

12 20 1.1e-05 0.0038 19.9 1.0 1 23 490 512 490 512 0.98

13 20 0.0046 1.6 11.7 5.5 1 23 589 611 589 611 0.98

14 20 5.8e-06 0.002 20.8 2.2 1 23 617 639 617 639 0.99

15 20 3.4e-06 0.0011 21.5 2.5 1 23 645 667 645 667 0.94

16 20 0.0047 1.6 11.6 6.0 1 23 673 695 673 695 0.95

17 20 0.00034 0.11 15.2 0.6 1 23 880 902 880 902 0.97

18 20 1.6e-05 0.0056 19.4 0.9 2 23 909 930 908 930 0.97

19 20 0.00037 0.12 15.1 2.8 1 23 936 958 936 958 0.97

20 20 0.00022 0.073 15.8 0.7 1 23 964 986 964 986 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0029	0.97	12.3	3.6	1	23	71	93	71	93	0.95
2	20	0.0017	0.56	13.1	0.1	1	23	99	121	99	121	0.94
3	20	5.5e-06	0.0019	20.9	0.1	2	23	127	148	126	148	0.96
4	20	0.023	7.9	9.4	0.3	5	23	158	176	155	176	0.93
5	20	3.3e-06	0.0011	21.6	1.9	1	23	190	212	190	212	0.98
6	20	0.00039	0.13	15.0	1.3	1	23	235	259	235	259	0.95
7	20	0.00013	0.045	16.5	0.4	1	23	265	288	265	288	0.97
8	20	7.8e-06	0.0026	20.4	1.0	1	23	294	317	294	317	0.96
9	20	0.0012	0.41	13.5	4.1	1	23	327	350	327	351	0.97
10	20	4.5e-06	0.0015	21.1	3.4	1	23	434	456	434	456	0.98
11	20	1.5e-05	0.0051	19.5	3.1	1	23	462	484	462	484	0.99
12	20	1.1e-05	0.0038	19.9	1.0	1	23	490	512	490	512	0.98
13	20	0.0046	1.6	11.7	5.5	1	23	589	611	589	611	0.98
14	20	5.8e-06	0.002	20.8	2.2	1	23	617	639	617	639	0.99
15	20	3.4e-06	0.0011	21.5	2.5	1	23	645	667	645	667	0.94
16	20	0.0047	1.6	11.6	6.0	1	23	673	695	673	695	0.95
17	20	0.00034	0.11	15.2	0.6	1	23	880	902	880	902	0.97
18	20	1.6e-05	0.0056	19.4	0.9	2	23	909	930	908	930	0.97
19	20	0.00037	0.12	15.1	2.8	1	23	936	958	936	958	0.97
20	20	0.00022	0.073	15.8	0.7	1	23	964	986	964	986	0.95

Sequence Information

Coding Sequence: ATGGTGCGACCTGACTTAGGAATGACAAGCAGGATTGTCTTACACCTCGTACATAAACTTCTACAATCATATGGTAATATCGAGGAACTCCATGTATTCACAGATAGATTTTATACCAATCTAGATTTGCCATCAGCACTATATAACATGAAAGTTCATCTAACAGGAACTATAATGAGAAACAGAAAAGGTTTGCCAGAAGAGGGCCCACACAAGTGTAATGTTTGTCCAAAAGAATTCATGTCGTATACACAGTTCAAAAAGCACAAAGCATTGCATATGGATGACAAGCCTTACCGTTGTCCATTATGTCCATCTACTTTTAACATTCCATCCAACTTAAATCTACATTCAGCACTGCACAATTTAGATTCTTTAGAATGTCCTGAGTGTCAAAAGAAATTCAGCAGAATAGCAAGCTTAAAAGCACATATCATGCTTCACGAGAAAGAAGAAAATTTGTTCTGTATAGAGTGCGGTGATGAATTCAGCAATCAGGTATACCTTGACAGACATATGAAATATCACGAAGATGAATGGGTGAAACCCGAACCACAAATGAAAGTATACCAGTGCCCTCATTGTGATCGTCAATATTCCAAAGCCTCTATGTTGAGGGATCACATGAAAGACCATTACAAGGTAAAAGACAACCTGAGTGCCAGAAGTTATAAACGAGCAATTAGACGTGGTATCATGCTTCATCGTTGTGATATCGGTAGTTGTCAAAAAGCATTCCAAAAACCGAGCCAATTAATTCGGCATAAACGAATTCACACAGGGGAAAAACCTTTTAAGTGTGAAATTTGCTCAAGTGCCTTCAACCAGAAAGGTTCTTTGTTAATTCATATGTCGTCTACTCATAATGGAATACGTCCTCATCAATGTGAATTTTGTGATGCTACTTTTAGTCAAAAAGgGAACTTGAGAGCACATGTATTAAGATTACACTCTGTACCACATTCTCAAGAAGTTGTTTACAGATGTTCAGGTTGTACTTGTGTTTTTCGTAAACTGGGAAGTTTGAATGCACACACGAATAGAATGCATCATACCAGTAATAATAAGcTAAACCAAGAGGTGAAGATTGGTCCTAAAACTGATTCATCTGAGGTAGAGAATAAAGATGCTAATGCCATTCAGTTGTTATCCAGAGATAATTCCGACAAAGaaaatgatAGCATGGAGAATGTAAATTCGGAAGTTTCCCAGACGTATATTACTGTTGCAAATAAAATGGAAGATGGCACAATCAGCCGCACAACGATACGACAGAGACGAATGGGTGCAGTGAAGTGGCACCAGTGTGTTCATTGTTCCAAGGAGTTCAAGAAACCTTCAGACCTTATTAGACATCTTCGAATACATACCAGAGAAAAACCTTTTAAGTGCAAACATTGTTTTCGAGCATTTGCAGTGAGATCAACATTAGTTACTCATATAAGAACACACACAGGAGCGAAGAATTATGTCTGCAAgatttgtaacaaattatatgCAACGAAAAGTAGTCTTAAAGTTCATACACAatcacattttagaaagaaaaaaggttcagtaaatggaaataataaaattgaagttcCGGTAACAGAATCTTCAGGTGAAAATGTCCTTGCTTCACAGCATGACAATAATAATATCAGACATGGAAATGAAATGCAAATCCGGCTTGAAGAGCCAATTCTGATTACTGACAATGGGTTGGTCCAAGTTGTTGCAGTTAAAACTATTCAAGTAACGGACGATATAGCGGACAAACCTCATCGTTGTATGATTTGTTCATCCTCCTTTCGTAAATACAATCACTTGAAAGTACATCTACgggtgcatactggagaaaagcCTTTTAAGTGTCACATTTGTACCAGGAGTTTTATATCCAATGGAGTTTTAAAAGGACACATGCGTACACATTTGAACTTAAAAACTCATAAATGTGAAGATTGTGGTAAATATTTTTCGACTAAAGGCAGCTTACGACGCCACACAGTCCTGCATACTGTTGGTCGACCTTTTCTTTGTCCTTATTGCAATAAGACTTACAAGACACATTCAAGCTGTCAGAAACATATAGGAACACATAAAGTAGTTATAAGGcAAGTTGTTGGTGAGGATGGTCAAACACTAGAGTTTCAACAATTCCTGGATGAAGAAGAGAATATTAATGATACTGAAATTGAAGTCAGAGCTATGGATACTGGCCATGAAGAATCAATGGAGAATACTGACGCTACTGTAGAAGCCCTTCTTGTAAACCGAGGAGACCTGAATGATGAGCCTTATATTATACATTCTgTTGAAAATGATGTTGATATAACAGTGACAGGAGACAGAAACACTCTTCATGCTGATGCTTCAGGGACAATCACTTTGCCAAGCCTAGGGGGTCAAGATCAACTTACACAGGAGAGTATAAGAGAGATTGAAGAAACTTTAAACCAACAACTTTTCGGAGCTGCAAATGATCTTGGACTTGTGGAAGATAAGGAACAATCTGTTCTGTTTGATCAGGGTTTTGAAAATTGTGTCTTCTCTGCCATTGGTCTGCAAaatgacCCGTTGGAGTTGAATCAAGGTTTAACCCAAACTAACCTCTCAAGTGTCATTCCACAAGAAAAGGAGCCAGAAACGTTGTTTAgttgtGATAAATGTGACTCCATGTTCAAAACAAATGAAGAATTTGAAGCACACAAGCTCATTCATATTGTACCAAAAGACAAGACTTGTACTATTTGCGAAAAGACCTTCTCATCAGCAGCGAACTACAAGCTACACGTAAAAAGCCATGGTAGAGAAAAAGAACATGAATGTCATTTCTGTGGAGCTCGTTTTACTTTGGCATTCTCATTGGCCAGACATATGACCATGCATTCGGAAGATAAGACATTTATCTGTTCAACTTGTGGAGCATCATATCGAACTGAAACACAACTTCGGAGGCATTCTAATGAACATAAAGAACCTAGAATACGACCTCGAAAACGTAGAGGAGAAGCAAGACAACTAACTGAAGAAGAGACTAAACAGCTCGCCAATCAGTTACCTCATCAGGCGAGTTCAGTTTCAGAAAGAGTACTTATTGCTTCATTTGCTGAAAGGGATAGAATCAGCGATCTTAAAgtGTCAAATAAAagattgtaa
Protein Sequence: MVRPDLGMTSRIVLHLVHKLLQSYGNIEELHVFTDRFYTNLDLPSALYNMKVHLTGTIMRNRKGLPEEGPHKCNVCPKEFMSYTQFKKHKALHMDDKPYRCPLCPSTFNIPSNLNLHSALHNLDSLECPECQKKFSRIASLKAHIMLHEKEENLFCIECGDEFSNQVYLDRHMKYHEDEWVKPEPQMKVYQCPHCDRQYSKASMLRDHMKDHYKVKDNLSARSYKRAIRRGIMLHRCDIGSCQKAFQKPSQLIRHKRIHTGEKPFKCEICSSAFNQKGSLLIHMSSTHNGIRPHQCEFCDATFSQKGNLRAHVLRLHSVPHSQEVVYRCSGCTCVFRKLGSLNAHTNRMHHTSNNKLNQEVKIGPKTDSSEVENKDANAIQLLSRDNSDKENDSMENVNSEVSQTYITVANKMEDGTISRTTIRQRRMGAVKWHQCVHCSKEFKKPSDLIRHLRIHTREKPFKCKHCFRAFAVRSTLVTHIRTHTGAKNYVCKICNKLYATKSSLKVHTQSHFRKKKGSVNGNNKIEVPVTESSGENVLASQHDNNNIRHGNEMQIRLEEPILITDNGLVQVVAVKTIQVTDDIADKPHRCMICSSSFRKYNHLKVHLRVHTGEKPFKCHICTRSFISNGVLKGHMRTHLNLKTHKCEDCGKYFSTKGSLRRHTVLHTVGRPFLCPYCNKTYKTHSSCQKHIGTHKVVIRQVVGEDGQTLEFQQFLDEEENINDTEIEVRAMDTGHEESMENTDATVEALLVNRGDLNDEPYIIHSVENDVDITVTGDRNTLHADASGTITLPSLGGQDQLTQESIREIEETLNQQLFGAANDLGLVEDKEQSVLFDQGFENCVFSAIGLQNDPLELNQGLTQTNLSSVIPQEKEPETLFSCDKCDSMFKTNEEFEAHKLIHIVPKDKTCTICEKTFSSAANYKLHVKSHGREKEHECHFCGARFTLAFSLARHMTMHSEDKTFICSTCGASYRTETQLRRHSNEHKEPRIRPRKRRGEARQLTEEETKQLANQLPHQASSVSERVLIASFAERDRISDLKVSNKRL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -