Aaln082428.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphrophora alni
Gene Symbol
ZBED5
Assembly
GCA_963513935.1
Location
OY740777.1:8473016-8479673[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 47 0.0012 0.4 13.5 6.7 1 23 378 400 378 400 0.99
2 47 2.2e-06 0.00075 22.1 0.5 1 23 406 428 406 428 0.99
3 47 6.6e-05 0.022 17.5 1.9 1 23 434 456 434 456 0.99
4 47 0.00021 0.071 15.9 5.8 1 23 462 484 462 484 0.99
5 47 0.06 20 8.2 5.3 1 21 490 510 490 512 0.95
6 47 0.0044 1.5 11.7 1.3 1 23 518 540 518 540 0.99
7 47 0.0042 1.4 11.8 0.5 1 23 546 568 546 568 0.98
8 47 3.4e-05 0.011 18.4 2.7 1 23 574 596 574 596 0.98
9 47 0.00091 0.31 13.9 8.3 1 23 602 624 602 624 0.98
10 47 0.00047 0.16 14.8 5.9 1 23 630 652 630 652 0.99
11 47 0.0041 1.4 11.8 7.0 1 23 658 680 658 680 0.98
12 47 0.0004 0.13 15.0 2.0 2 23 687 709 686 709 0.97
13 47 0.0044 1.5 11.7 3.8 1 23 715 737 715 737 0.99
14 47 2.8e-05 0.0094 18.6 7.3 1 23 743 765 743 765 0.98
15 47 7.2e-06 0.0024 20.5 3.0 2 23 772 793 771 793 0.97
16 47 0.0029 0.98 12.3 7.9 1 23 799 821 799 821 0.98
17 47 0.00036 0.12 15.1 3.3 1 23 827 849 827 849 0.99
18 47 0.00032 0.11 15.3 4.7 1 23 855 877 855 877 0.99
19 47 2.2e-05 0.0075 19.0 2.8 1 23 883 905 883 905 0.99
20 47 6.3e-05 0.021 17.5 6.2 1 23 911 933 911 933 0.99
21 47 0.00032 0.11 15.3 3.4 1 23 939 961 939 961 0.98
22 47 3.3e-05 0.011 18.4 6.2 1 23 995 1017 995 1017 0.99
23 47 0.0016 0.54 13.1 5.9 1 23 1023 1045 1023 1045 0.97
24 47 2e-06 0.00067 22.2 2.2 1 23 1051 1073 1051 1073 0.99
25 47 5.6e-06 0.0019 20.8 1.0 1 23 1079 1101 1079 1101 0.99
26 47 9.4e-05 0.032 17.0 3.2 1 23 1107 1129 1107 1129 0.98
27 47 0.016 5.3 10.0 4.2 1 23 1135 1157 1135 1157 0.97
28 47 4.6e-06 0.0016 21.1 2.0 1 23 1163 1185 1163 1185 0.99
29 47 2.5e-05 0.0083 18.8 2.0 1 23 1191 1213 1191 1213 0.98
30 47 4.5e-06 0.0015 21.1 2.6 1 23 1219 1241 1219 1241 0.98
31 47 0.017 5.7 9.9 3.2 2 23 1248 1269 1247 1269 0.97
32 47 0.00026 0.088 15.6 5.5 1 23 1275 1297 1275 1297 0.98
33 47 0.0026 0.87 12.5 4.2 1 23 1303 1325 1303 1325 0.97
34 47 8e-05 0.027 17.2 2.9 1 23 1331 1353 1331 1353 0.98
35 47 3.3e-06 0.0011 21.6 2.3 1 23 1359 1381 1359 1381 0.99
36 47 2.2e-05 0.0076 18.9 2.8 1 23 1387 1409 1387 1409 0.98
37 47 2.4e-05 0.0081 18.8 4.2 1 23 1415 1437 1415 1437 0.99
38 47 5.9e-05 0.02 17.6 3.4 1 23 1443 1465 1443 1465 0.99
39 47 6.4e-06 0.0022 20.7 4.0 1 23 1471 1493 1471 1493 0.99
40 47 2.5e-05 0.0085 18.8 5.4 1 23 1499 1521 1499 1521 0.99
41 47 3.1e-06 0.001 21.7 2.5 1 23 1527 1549 1527 1549 0.99
42 47 1.2e-05 0.0041 19.8 1.4 1 23 1555 1577 1555 1577 0.99
43 47 1.3e-05 0.0043 19.7 0.4 1 23 1583 1605 1583 1605 0.99
44 47 2.1e-05 0.0071 19.0 1.8 1 23 1611 1633 1611 1633 0.99
45 47 4.2e-05 0.014 18.1 1.0 1 23 1639 1661 1639 1661 0.99
46 47 0.01 3.5 10.5 5.2 1 23 1667 1689 1667 1689 0.98
47 47 0.0051 1.7 11.5 1.8 1 23 1733 1755 1733 1755 0.98

Sequence Information

Coding Sequence
ATGGATCGTTGGTTAAAAACAGGCACAGTTAAACGTACGAATGAAGAGGCAATGCCTGACGGGAGCCCTCCTGACCTTGCTACTCCGTCGTGTTCAAAATCCAGTGCCAGTGTAAGCAAAGCTAAAAAGCGCAAGTATtgtgatgaatatttaaattttggatttgtTCAGGCTGGTACAGACAGTGAACAAAAACCGCAATGTGTAGTGTGCTTTGAAATTCTGTCTAATGAATCTATGAAACCTGCTAAGCTGCGTAGGCATTTAGAAACAAAGCACTACGAGTTGTTGGGCACTGCAAATGAAAATGCGACCATGGCATCATATGCCGTTTCCTTGTTGATTGCTAAGTCGGGAAAACCTTTTAACATCGGAGAAGAGCTAATTATGCCTGCTGCCAAAACTATGTGCAGCATAATGCTGGGTGATTCTGCGGCCAAAGAAATGGGTTCGATTTCTTTATCCAATGACTCAGTTAAAAGAAGGATCGATGATATGTCAGATAACGTGCATTTTCAATTAGTTACACGTTTGAAAACCACCAAAATGTATGCGTTACAATTAGACGAGAGTACAGATTTAACTGACAAATCTCACTTGTTAGCTTTTGTTCGTTACGAATACGAAAAACGTGTCTTTGAAGACCTGTTGTTTTGTAAAGAGGTTCTTCATAACAACTCAAATGATGTGTTCGAAGcccttgattattttgttaaGGAACATGAACTAGATTGGAATAAGTGTGTCGGATTGGCTACTGACGGAGCTGGAGCAATGGCTGGTTATAAAACGGGATGGATGGCTCGAGTGATGCGAGTTGCTCCAAATGTCAAATGGACTCACTGCTCAATACATCGGGAGGCACtagcaCTACAAGGAGCTGATATCAATGTATTCCTTGTAGAAGAAAAAATCGAAGCAATGATTGAAAAACTGAAACTGTGGGCAGGTCGAGTTGCAAAAAAGTCCTACACTGCCTTGCctgttttacaacattttctaACGACATCTGAAGAAAGTCTTCCCTCTGATGTCCAAGACATAATTGTTGAACACATGATAGATTTGTCAAATGCATTGAGAAAGAGAAAACGTAGATTACACAAAGGAAAACATTTTCGTAAAAAACCTTACAAGTGTCTAGTCTGTAATTATTCATGTTCAACATCAACTTGTTTAAGATATCATATGAGAGTGCATACAGGAGAAAAACCTTACAAATGTAAAGTCTGTGACTATTCTAGTTCTTCATCTAGTAGCCTTGTTATCCATATGAGGATCCATACTGGTGAAAAACCTTATAAGTGTGCAAGATGTAACTATTCCTGTGCTACATCAAGTGGACTTAAAATTCATATAAGATCTCATACAGGAGAAAAACCTTATAAGTGTACGGTGTGTGAATACTGTTGTTCATCGTCTAGTAGCCTCACAATTCACTTGAGATATCACACTGGGGAAAAACCATATCAatgtacattttgtaattattcttgCGCCTCTTCAGGTGCACTTAAGATACACAAGAGATGTCATACTGGAGAAAGGCCATACAAATGTACAAAATGTGATTATTCCAGTTCTTCTGGAAGTAGTCTTCTTTTTCATATGAGAAttcatactggagaaaaaccttttAAGTGCCCTTCTTGTATTTTTCGTTCTACATCATCTAGTGCACTTAGAATACACATGAGGATTCATACAGGTGAAAAACCATATAAGTGTACTATCTGTGACTATACTTGTGCTTCCTCAAGTTCTCTTAAAGTTCACGAGAGATACCATAGTGGTGAAAAACcatttaaatgtacaatttgtGATTATTGTTGTGCAACATCCAGCTGTCTTAAAGTACATTTGAGATATCATACTGGAGATAAACCCTTTAAATGTTATGATTGTGGGTATTCATGCCATTCGTATAGTACACTTAAAGTCCACATAAGATCTCACACTGGAGAAAAGCCATATCACTGCACAGATTGTGATCATTGTAGTACTACATCAAGTGCAATGAAAAAACACATGACAATACATTCtaatgaaaaactattaaaatgtagGATATGCGAATATGCATGTTCTCTAAAGAGCAGTCTTAAAATACATATGAGAAGAGTGCACTTGGGTGAAAAACCGTTTAAATGTGCTGATTGTGAATATGCTTGTCATTCTCTAAGTTCGCTTAAAGTtcacacaagatctcacacagGAGAAAAACCATATCATTGTACAGATTGTGATCATTCTTGTTCTACATCGAGTGCACTTAAAAAACACATGATGACACAttctaatgttaaaaatttaagttgtaaGATATGTGACTATACATGTTCACAAAGAAGTAGTCTTAAaatgcacatgagagtgcacacAGGAGAAAAGCCATTTAAATGTACTTTCTGTAATTATTCCTGTACAACTTCAAGTAGACTTAAAATCCATATAAGACAccatacaggagagaaaccttttaaATGTACATATTGCAATTATTCTTGTTCATCAACAAGTGTTCTTAAAGTACATGTGAGAGTTCATACAGGTGAAAAGCCTTATAAATGCAACGTCTGTGATTATTGTTGTGCAACATCAAACAGTCTTACATTACATACAAGGATACACACAGGAGAAAAACCTTTTAAGTGTACAACCTGTGACTATGCTTGTTCATCATCTAGTACCCTTAAAATCCATTTGAGaatacacacaggagagaaaccttataaaTGTTCTCATTGTAACTATTCCTGTTCAGCATCAAGTAGTCTTAGATCACACATGAGAATGCACACTGGTGAAAAACCATACAAGTGTAAAGTCTGCAGTTATTCTTGTTCTAATTCTGGGTCTCTTAAAATTCATGTCAAATATCATACTAAAGAAAAACGATTTAAATGTACTCGCTGTATATATTCTTGTTCCTCACTAAATAGGCTTAAGATTCACAAAAGATGCCATGTTGGAGAAAAACCATACAAATGCAAACACTGTGGATATTCAAGTTCATCTTCACATAGttttaaagtgcacatgagagttcACACGGGGGAAAAGCCTTATAAGTGTGTTTGCTGTGATTACTCGTGTACAAATTCAAGTAGTCTCAAAATTCACATGAGGTCTCATACTGGAGAGAAACCTTATCAATGTTCTGATTGTGATTACTCTTGTGCAACATCAAGTAGTCTTAAATCTCATTTAAGAGTCCATACAGGTGAGAAACCTTTTAAGTGTACTCAGTGTGATTATGCTTCTTCTCAAAATAGTAGTCTTACATTGCACATGAGAGTTCACACTGGAGAGAAGCCATACAAGTGCACACAGTGTGATTATGCATGCTCAAATTCAAGCAGTCTTAAAATTCACAATATGACTCACACCGGAGAAAAACCGTTTAAGTGTCCATGCTGTTCGTATGCGTGTTCTACATCTAGTGCACTTAAAATCCACATGACAAaccatactggagaaaaaccttacAAATGCACTGAATGTGATTATGCTTGTGGCCAGTCTAGTAGTCTCAAGTCACATATGAGAGTGCATACAGGGGAAAAACCTTTTCAGTGTTCTGAATGTGATTATGCATGCACAAATTCTAGTAGCCTAAAAGTTCACTCTAGAATTCACAGTGGAGAAAAACCATACAAATGTTCTGAGTGTGATAATTCTTTTACAACATCAAGTAGACTTAAGAGACATATGTCAAATCATACAGGTGAGAAGCCACTGAAGTGTTCAGAGTGTGAATATTCTTGTCATCAATTGGGTAGTCTTAAGTTACATATGACTAtacatactggagaaaaaccttatcAATGTCCAGAATGTGATTATAAGTGTTCAAATTCAAGTAGCCTTAAGATTCACTGTAGAACTCATACAGGTGAAAAACCGTTCAAATGTACATTTTGTACGTATGCCAGTACTACTTCTAGCTCACTTAAAATCCACATGACACATCATACGGGAGAAAAACGTTACAAATGTACTGAATGTGATTATGCCTGTAATCAATCTAGTAGTCTCAGGTCACATAATAGAATACATACGGGAGAAAAACCGTTTAAGTGTCCAGATTGTGATTATGCATGCACTAATTCTAGTAGTTTAAAGATTCATTCTAGGACTCATAGTGGAGAAAGACCATACAAATGTTCAGAGTGtaataatactttttcaacattaAGTAGACTTAAAAGACATATGTCAAATCACACAGGGGAGAAGCCGTTTAAGTGTTCAGAATGTGAATATACTTGTTATCAGTCAAGTAGTCTTAGGACACATATGAGGATACATACCGGGGAAAAACCATACCAATGTACGGAATGTGATTATAAGTGCACAAATTCTGGTAGTCTAAAGATTCACTCTAGAActcatactggagaaaaacctttcCAGTGTACAGATTGCTCTTATGCTTGTACAACATCAAGTAGCCTTAAGAGTCATATGAGAAGTCATTCTAGTGAAAAATTATACAAGTGTTCACGTTGTGACTACACATGTTCACAATCTAGTAGTTTGAAGGTGCATAGAAGAACACATTCAGGagaaaaaccatttaaatgtATGGAGTGCGACTATTCTTGTACTCAACCAAATAATCTAAGAATCCACATGAGAATGCACACTGGGGAAAAACCTTACAAGTGCACGGAATGTGAGTATACCAGTTCTAGCTCAAGCAGTCTTAAAATTCATTTGAGATCGCATACAGGAGAAAAACCTTTTAAATGTGCAGATTGTGATTATGCGTGCGCAACATTAAGTGCCCTTAAAGTTCATATTAgaatgcatactggagaaaaaccgtataaatgtgaACAGTGTGATTATGCATGTACTAATTCTGGTAGCCTTAAAATGCATCTTAGAATACATACTGGTGAAAAACCCTACAAGTGCAGTGCATGCGATTACTCATCTTCAAGTTCAAGTAGTTTAAAATCCCACTTAAGAGTACATTCGGGAGAAAAGCCTTATAAATGTGACGACTGTGATTATGTTTGTGCTAACACGTGTAGTCTAAGATCTCATAAGAAATTACACAAAGGCTCAGCTCATGGCAAAAAGACCAGTACTAGAATAAACCGTTTCAGGTGTAAACATTGTAGGTTTACTTGTTCATCAACTAAAAAGCTTAAAGTTCACAAAAGATGTCATAAAGATGGAACATCATACTCATGTCCTGAGTGTGTTTATTCTTGTCTAACGTCAAGCGGTTTAAAGTTACACATGAAAAAACATTATTGA
Protein Sequence
MDRWLKTGTVKRTNEEAMPDGSPPDLATPSCSKSSASVSKAKKRKYCDEYLNFGFVQAGTDSEQKPQCVVCFEILSNESMKPAKLRRHLETKHYELLGTANENATMASYAVSLLIAKSGKPFNIGEELIMPAAKTMCSIMLGDSAAKEMGSISLSNDSVKRRIDDMSDNVHFQLVTRLKTTKMYALQLDESTDLTDKSHLLAFVRYEYEKRVFEDLLFCKEVLHNNSNDVFEALDYFVKEHELDWNKCVGLATDGAGAMAGYKTGWMARVMRVAPNVKWTHCSIHREALALQGADINVFLVEEKIEAMIEKLKLWAGRVAKKSYTALPVLQHFLTTSEESLPSDVQDIIVEHMIDLSNALRKRKRRLHKGKHFRKKPYKCLVCNYSCSTSTCLRYHMRVHTGEKPYKCKVCDYSSSSSSSLVIHMRIHTGEKPYKCARCNYSCATSSGLKIHIRSHTGEKPYKCTVCEYCCSSSSSLTIHLRYHTGEKPYQCTFCNYSCASSGALKIHKRCHTGERPYKCTKCDYSSSSGSSLLFHMRIHTGEKPFKCPSCIFRSTSSSALRIHMRIHTGEKPYKCTICDYTCASSSSLKVHERYHSGEKPFKCTICDYCCATSSCLKVHLRYHTGDKPFKCYDCGYSCHSYSTLKVHIRSHTGEKPYHCTDCDHCSTTSSAMKKHMTIHSNEKLLKCRICEYACSLKSSLKIHMRRVHLGEKPFKCADCEYACHSLSSLKVHTRSHTGEKPYHCTDCDHSCSTSSALKKHMMTHSNVKNLSCKICDYTCSQRSSLKMHMRVHTGEKPFKCTFCNYSCTTSSRLKIHIRHHTGEKPFKCTYCNYSCSSTSVLKVHVRVHTGEKPYKCNVCDYCCATSNSLTLHTRIHTGEKPFKCTTCDYACSSSSTLKIHLRIHTGEKPYKCSHCNYSCSASSSLRSHMRMHTGEKPYKCKVCSYSCSNSGSLKIHVKYHTKEKRFKCTRCIYSCSSLNRLKIHKRCHVGEKPYKCKHCGYSSSSSHSFKVHMRVHTGEKPYKCVCCDYSCTNSSSLKIHMRSHTGEKPYQCSDCDYSCATSSSLKSHLRVHTGEKPFKCTQCDYASSQNSSLTLHMRVHTGEKPYKCTQCDYACSNSSSLKIHNMTHTGEKPFKCPCCSYACSTSSALKIHMTNHTGEKPYKCTECDYACGQSSSLKSHMRVHTGEKPFQCSECDYACTNSSSLKVHSRIHSGEKPYKCSECDNSFTTSSRLKRHMSNHTGEKPLKCSECEYSCHQLGSLKLHMTIHTGEKPYQCPECDYKCSNSSSLKIHCRTHTGEKPFKCTFCTYASTTSSSLKIHMTHHTGEKRYKCTECDYACNQSSSLRSHNRIHTGEKPFKCPDCDYACTNSSSLKIHSRTHSGERPYKCSECNNTFSTLSRLKRHMSNHTGEKPFKCSECEYTCYQSSSLRTHMRIHTGEKPYQCTECDYKCTNSGSLKIHSRTHTGEKPFQCTDCSYACTTSSSLKSHMRSHSSEKLYKCSRCDYTCSQSSSLKVHRRTHSGEKPFKCMECDYSCTQPNNLRIHMRMHTGEKPYKCTECEYTSSSSSSLKIHLRSHTGEKPFKCADCDYACATLSALKVHIRMHTGEKPYKCEQCDYACTNSGSLKMHLRIHTGEKPYKCSACDYSSSSSSSLKSHLRVHSGEKPYKCDDCDYVCANTCSLRSHKKLHKGSAHGKKTSTRINRFRCKHCRFTCSSTKKLKVHKRCHKDGTSYSCPECVYSCLTSSGLKLHMKKHY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-