Aaln023895.1
Basic Information
- Insect
- Aphrophora alni
- Gene Symbol
- -
- Assembly
- GCA_963513935.1
- Location
- OY740767.1:11850286-11851994[-]
Transcription Factor Domain
- TF Family
- CSRNP_N
- Domain
- CSRNP_N domain
- PFAM
- PF16019
- TF Group
- Unclassified Structure
- Description
- This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.0064 2e+02 4.1 0.2 35 67 48 80 45 93 0.77 2 17 0.012 3.6e+02 3.2 0.1 38 66 71 99 64 110 0.81 3 17 0.0086 2.7e+02 3.7 0.1 39 69 92 122 84 136 0.71 4 17 0.0072 2.3e+02 3.9 0.2 40 69 113 142 104 157 0.64 5 17 0.0069 2.2e+02 4.0 0.2 39 69 132 162 124 177 0.66 6 17 0.0052 1.6e+02 4.4 0.2 40 71 153 184 144 206 0.61 7 17 0.0077 2.4e+02 3.8 0.1 38 67 191 220 184 231 0.80 8 17 0.016 5e+02 2.8 0.1 37 65 210 238 204 250 0.80 9 17 0.0079 2.5e+02 3.8 0.1 38 66 251 279 244 294 0.79 10 17 0.011 3.4e+02 3.3 0.1 39 60 292 313 264 325 0.56 11 17 0.0056 1.8e+02 4.3 0.2 43 71 296 324 287 348 0.54 12 17 0.0046 1.4e+02 4.6 0.4 41 71 334 364 324 389 0.58 13 17 0.0048 1.5e+02 4.5 0.2 40 71 353 384 344 404 0.62 14 17 0.0054 1.7e+02 4.3 0.5 40 71 373 404 363 431 0.60 15 17 0.022 6.8e+02 2.4 0.2 38 66 411 439 399 453 0.76 16 17 0.012 3.7e+02 3.2 0.2 43 71 436 464 426 479 0.53 17 17 0.015 4.7e+02 2.9 0.1 38 65 451 478 444 493 0.81
Sequence Information
- Coding Sequence
- ATGACAGCTGATCCACCGCCATCTCAATTCTCGAACTATTGGAAATTCGGTTATGAAATACCCAACTGGATGACAACTTCTATGAGACTGTCAGTCCCTTTGTTAAAACTCCAAGAGACTCTATCCTTTCCCGATCGAGGCACTCACGTTCAAAGATCAGGGATTCAGCAGTTTACTCTAGCAGACCACATTACCTACACCACTCACATTCAAAGATCAGGGGTTCAGCAGTTTACTCTAGCAGACCACATTTCCTACACCACTCACATTCAAAGATCAGGGGTTCAGCAGTTTACTCTAGCAGACCACATTTCCTACACCACTCACATTCAAAGATCAGGAGTTCAGCAGTTTACTCTAGCAGACCACATTACTTACACCACTCACATTCAAAGATCAGGAGTTCAGCAGTTTACTCTAGCAGACCACATTACTTACACCACTCACATTCAAAGATCAGGGATTCAGCAGTTTACTCTAGCAGACCACATTTCCTACACCACTCACATTCAAAGATCAGGGATTCAGCAGTTTACTCTAGCAGACCACATTACCTACACCACTCACATTCAAAGATCAGGAGTTCAGCAGTTTACTCTAGCAGACCACATTACCTACACCACTCACATTAAAAGATCAGGGGTTCAGCAGTTTACTCTAGCAAACCACATTTCCTACACCACTCACATTCAAAGATCAGGGATTCAGCAGTTTACTCTAGCAGACCACATTACCTACACCACTCACATTCAAAGATCAGGAGTTCAGCAGTTTACTCTAGCAGACCACATTACCTACACCACTCACATTAAAAGATCAGGGGTTCAGCAGTTTACTCTAGCAGACCACATTTCCTACACCACTTACATTCAAAGATCAGGAGTTCAGCAGTTTACTCTAGCAGACCACATTACCTACACCACTCACATTCAAAGATCAGGGATTCAGCAGTTTACTCTAGCAGACCACATTACCTACAACACTCACATTCAAAGATCAGGGATTCAGCAGTTTACTCTAGCAGACCACATTACCTACACCACTCACATTCAAAGATCAGGGGTTCAGCAGTTTACTCTAGCAGACCACATTACCTACACCACTCACATTCAAAGATCAGGGGTTCAGCAGTTTACTCTAGCAGACCACATTTCCTACACCACTCACATTCAAAGATCAGGGATTCAGCAGTTTACTCTAGCAGACCACATTACCTACACCACTCACATTCAAAGATCAGGGGTTCAGCAGTTTACTCTAGCAGACCACATTTCCTACACCACTCACATTCAAAGATTAGGGGTTCAGCAGTTTACTCTAGCAGACCACATTTCCTACACCACTCACATTCAAAGATCAGGGGTTCAGCAGTTTACTCTGGCAGACCACATTTCCTACACCACTCACATTCAAAGATCAGGGGTTCAGCAGTTTACTCTGGCAGGCCACATTTCCTACACCACTCACATTCAAAGATCAGGGGTTTAG
- Protein Sequence
- MTADPPPSQFSNYWKFGYEIPNWMTTSMRLSVPLLKLQETLSFPDRGTHVQRSGIQQFTLADHITYTTHIQRSGVQQFTLADHISYTTHIQRSGVQQFTLADHISYTTHIQRSGVQQFTLADHITYTTHIQRSGVQQFTLADHITYTTHIQRSGIQQFTLADHISYTTHIQRSGIQQFTLADHITYTTHIQRSGVQQFTLADHITYTTHIKRSGVQQFTLANHISYTTHIQRSGIQQFTLADHITYTTHIQRSGVQQFTLADHITYTTHIKRSGVQQFTLADHISYTTYIQRSGVQQFTLADHITYTTHIQRSGIQQFTLADHITYNTHIQRSGIQQFTLADHITYTTHIQRSGVQQFTLADHITYTTHIQRSGVQQFTLADHISYTTHIQRSGIQQFTLADHITYTTHIQRSGVQQFTLADHISYTTHIQRLGVQQFTLADHISYTTHIQRSGVQQFTLADHISYTTHIQRSGVQQFTLAGHISYTTHIQRSGV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -