Aaln079669.1
Basic Information
- Insect
- Aphrophora alni
- Gene Symbol
- CAMTA1
- Assembly
- GCA_963513935.1
- Location
- OY740776.1:12241056-12260960[-]
Transcription Factor Domain
- TF Family
- CG-1
- Domain
- CG-1 domain
- PFAM
- PF03859
- TF Group
- Unclassified Structure
- Description
- CG-1 domains are highly conserved domains of about 130 amino-acid residues containing a predicted bipartite NLS and named after a partial cDNA clone isolated from parsley encoding a sequence-specific DNA-binding protein [2]. CG-1 domains are associated with CAMTA proteins (for CAlModulin -binding Transcription Activator) that are transcription factors containing a calmodulin -binding domain and ankyrins (ANK) motifs [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-22 1.8e-17 65.4 0.2 33 80 7 53 3 64 0.94 2 2 0.33 1.5e+04 -2.0 0.1 70 96 76 102 74 112 0.58
Sequence Information
- Coding Sequence
- ATGATTCTCTCTTGTTTCAGACCGAAGAGTGGGTCGATGCTGTTGTACAGCAGGAAGAAGGTACGCTACCGTAGGGATGGATATTGCTGGAAGAAGCGAAAGGATGGCAAAACGACACGAGAGGACCACATGAAGTTGAAAGTACAAGGGACTGAGGTAAAAGTTGTGGAAGAAATGGGTTTGGAGGCTGGAAGAAACATGGTGCTGGCGATGAAGCCGCTCGACAAAGAACGCTTGAGGTACGGAGAAAGAGCGGCTCTGGAGCTCCAGAAGAAGATCAGGCAGTCTAGAAATATACAGAAAAGGAGACTGGAAGGCTTTTATAAAGCAGAAGAAGTCCCTGAGAATACAGCTTACTGTGCAGGGGGATATTAa
- Protein Sequence
- MILSCFRPKSGSMLLYSRKKVRYRRDGYCWKKRKDGKTTREDHMKLKVQGTEVKVVEEMGLEAGRNMVLAMKPLDKERLRYGERAALELQKKIRQSRNIQKRRLEGFYKAEEVPENTAYCAGGY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -