Aaln030781.3
Basic Information
- Insect
- Aphrophora alni
- Gene Symbol
- SMARCC2
- Assembly
- GCA_963513935.1
- Location
- OY740768.1:3734401-3772572[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.1e-14 1.7e-10 43.1 0.2 3 44 612 653 610 655 0.95
Sequence Information
- Coding Sequence
- ATGTTGACTTTGGGGCCTAAAAAAGACGGTGGGCCGAACGCAAAGTTCTTCGAATCGCCAGAGACTATTTCATTATTTGATGGAGTAAAATCTTGGCttcaaaaaaattgcaagaagTACTTACAGGCAGATCCACCAACTAGCAAAGGCCTCGCACAACTTGTGATACAACTCATCCAATTCCAAGAAGATAACCTTGGTAAAAATGTCAACAAGCCTCCTCTCACGCGCTTGCCtATGCGTTGTTTCCTGGATTTCAAACCAGGAGGTACACTGTGCCATATATTGGGGACAGTGTATAAATTCAAGAGTGAACAAGGTTGGCGGAGGTTCGATTTCCAGGTTAGTAAGagtCCTTCAAGAATGGATCGTAACGTAGAAATGTTTATGAATATAGAGAAGGCTTTACTTACAAACAAATGCTTAACTATGCCGACAGTGTATTTACGTTCAGATGTTGAGAAAGGAGTGGCTGTTCGTGTTAAAGAAATCATAAAACGGCATCAAGGAACTGTAACAGATAACGAGGACGAAGCATCTCACATCATCTATCCTGTATGTGATCCTCTGGATGAGGAGTACGCACGACCATCGTTCAAGAGAGACCGTATGGTTTTACTTCATTGGTATTACTTCCCTGATTCACATGATTCGTGGATATCGGCGGAGCTTCCAGTAGATCCTCCTGATTCACCGACTACACATAACTCGATCTGGAGAgTCGCAGCATCATGGGCTCTGGATTTGGATCAATACAATGAATGGATGAATGAAGAAGATTACGAAGTAGACGAGGCAGGAAGGAAAAAAGTACACAAgttgagACTTTCTGTGGAAGATCTGATGGGCCAATCTGATCCAGACAGGACAAAGAAGAAACCTAAAAGAAAAAGATCTCCTTCACCTCCACCTGTTAAACCTGGTAAAAGAAAAAGTGGACGAAGCCCAGCAGTGGTgcctaagaaaataaaaagtgaacCTGAAGATGAAGCTGATGACTTGACAAAAGACATGGCAGAGCCTATACCTGAACCTAATGTTCAAGAAGTAGTCATGCCTAAGCCAaGTtgttcatcatcatcatcttccaAAAAGGATAATGATGCTTTGCCAATAAAAAGTGGAACCATTGCAGACTTGGATGAGGAATCAGAACGAGCAGATGACAGTCAGCCCAGTAAAGCATCCACTGAAGCTGGATCTCAGgagaaagaaaaggaaaaagaGAAAGATGCAACCGTCACGAAGGAAGATGGACAAGAAGACAATGTCACAGAGCAGACGCACCACATTATCATACCCAGTTATTCAGCTTGGTTCGACTACAACTCTATTCATACCATCGAGAAGAGAGCTCTACCCGAATTCTTCAATAGCAAAAACAAGTCTAAAACTCCTGAAATATATTTGGCATATCGTAATTTTATGATTGACACGTATAGATTAAACCCTACGGAATATATAACAAGCACAGCTTCCCGTCGTAACCTAGCTGGGGATGTGTGTGCTATCATGAGAGTTCATGCTTTTCTGGAACAATGGGGCCTTGTTAACTACCAGGTGGATTCAGAAAGCAGACCTACACCAATGGGACCTCCACCAACATCTCACTTCCATGTGTTGTCAGATACACCTTCAGGATTACAACCAGTGAACCCTCCCAAGACTCCACAACCTTCTGCAGCTAAAACTTTGTTGGATATGGACAGGAAACTTGATTCTTCGGCTAAAAAGACAGACAGTGATCCTGGTTCTAACTTTGGACTTAAGCTTGATCAATACGCTCGCAAACCTGCAGCTTTAAGGAACAAAACAGCAGCAAGTATAACTCGAGACTGGTCAGAACAAGAAACTTTACTGCTTCTAGAAGGTCTGGAACTGTATAAAGATGATTGGAACAAAGTATGCGAACATGTCGGGAGTCGTACCCAAGACGAGTGTATTTTGCACTTCCTAAGATTACCTATTGAAGATCCTTATCTGGAAGATCATGAAGCCGGAGGCGGTGCCTTAGGACCATTAGCATACCAACCAATACCATTCAGTAAAGCAGGGAACCCAATCATGTCAACTGTAGCATTCCTAGCATCCGTTGTGGACCCACGTGTTGCTGCATCTGCTGCAAAAGCCGCAATGGAGGAGTTTGCTAATATCAAGGATGAAGTTCCTGCTGCTTTAATGGATGCACATATTAAGAATGTCGAGGCTTCAACAACAGATGGCAAGTTTGATCCTGCAGCAGGACTTATACAGAGTGGCATTGCAGGCACAGTCCCAGAAAAAGATGAAGACAATgaacaaaaagagaaaaaagaaggcGATGTTAAAGAAGGCGAGGAAAGTAAATCTCCAGAAGCAGTTGAAATAAAGAAAGAACAGATAGACAAGCCAGCTGAAGTTGTTCCGGAATCTATGGAGGTGGACAAGAAAGATGAAGCAGAACCTGAAAGTGCAGAGTTGAAAGAAGAAACAGAGAGAGAAAGATTAGTGAAAGACGCGCAATTACAATCAGCAGCTGCGGCAGCTTTAGCTGCAGCAGCGGTGAAGGCTAAACATCTAGCTGCTGTGGAAGAAAGAAAGATTAAATCTTTAGTCGCATTATTGGTAGAAACCCAGATGAAGAAACTAGAAATCAAATTAAGGCATTTTGAAGAGTTGGAAACAACGATGGAAAAAGAAAGAGAAGGTCTTGAATATCAGAGACAGCAGTTGATTCAAGAACGGCAGCAATTTCATTTAGAACAGTTGAAAGCAGCAGAATTTAGAGCACGACAACAAGCACAGCAGAGGATTGCTGCAGAACAACAACAGACGCCATCGACTACTCCCACACCACCTTCTCCACAAGCTGTTCCTACTCCACATCAAGCGGCCACATCTCCGTCACCAGCTCAGAGTTAG
- Protein Sequence
- MLTLGPKKDGGPNAKFFESPETISLFDGVKSWLQKNCKKYLQADPPTSKGLAQLVIQLIQFQEDNLGKNVNKPPLTRLPMRCFLDFKPGGTLCHILGTVYKFKSEQGWRRFDFQVSKSPSRMDRNVEMFMNIEKALLTNKCLTMPTVYLRSDVEKGVAVRVKEIIKRHQGTVTDNEDEASHIIYPVCDPLDEEYARPSFKRDRMVLLHWYYFPDSHDSWISAELPVDPPDSPTTHNSIWRVAASWALDLDQYNEWMNEEDYEVDEAGRKKVHKLRLSVEDLMGQSDPDRTKKKPKRKRSPSPPPVKPGKRKSGRSPAVVPKKIKSEPEDEADDLTKDMAEPIPEPNVQEVVMPKPSCSSSSSSKKDNDALPIKSGTIADLDEESERADDSQPSKASTEAGSQEKEKEKEKDATVTKEDGQEDNVTEQTHHIIIPSYSAWFDYNSIHTIEKRALPEFFNSKNKSKTPEIYLAYRNFMIDTYRLNPTEYITSTASRRNLAGDVCAIMRVHAFLEQWGLVNYQVDSESRPTPMGPPPTSHFHVLSDTPSGLQPVNPPKTPQPSAAKTLLDMDRKLDSSAKKTDSDPGSNFGLKLDQYARKPAALRNKTAASITRDWSEQETLLLLEGLELYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDHEAGGGALGPLAYQPIPFSKAGNPIMSTVAFLASVVDPRVAASAAKAAMEEFANIKDEVPAALMDAHIKNVEASTTDGKFDPAAGLIQSGIAGTVPEKDEDNEQKEKKEGDVKEGEESKSPEAVEIKKEQIDKPAEVVPESMEVDKKDEAEPESAELKEETERERLVKDAQLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEKEREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAQQRIAAEQQQTPSTTPTPPSPQAVPTPHQAATSPSPAQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00644966;
- 90% Identity
- -
- 80% Identity
- -