Basic Information

Insect: Aphrophora alni
Gene Symbol: TIGD6
Assembly: GCA_963513935.1
Location: OY740775.1:21372591-21374465[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 1.9e-07 3.9e-05 25.6 0.1 4 38 18 52 15 57 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	1.9e-07	3.9e-05	25.6	0.1	4	38	18	52	15	57	0.90

Sequence Information

Coding Sequence: ATGCCTAGGACATACAAGAGAAAAACGAACCGCCAGTCATGGAGTCAACAAAGCATGGAGCTGGCAATTATTGAAGTAATGTCTAGAAGAATGGGTTACAAGAAGGCATCAAAGGCGTTCAACATCCCTCAAAGTACTTTGGAAGACAGAGTTCGGAAGgcaaaaattaaagatttaacaCCCACACAAGCTTCAGCTAAAGGTATGGGATCTTACATTACTGTATTTTCAAAAGACCAGGAACAAGAATTGGtcgatcatattttattaatggaaagtaGACTATTTGGATTAACTTTAACTGATTTTCGAAAGTTAGCTTATGAACTAGCACTCAAGaacaatcttaaaaataaatttaaccaggAACTGAAAACTGCTGGCAAGGATTGGTTGTATGGTTTTTTGTCAAGGCACAAGAATCAGCTTTCTTTGAGGACTCCAGAAAAAACCTCTATTTCTCGAGCAATGGGTTTTAATAAAGTGGCCGTGAACAAATTTTTCGACCTACtcgaaagtttatatttaaagtatacattttctCCAAACGATATATACAATGTCGATGAAACGGGCATCACTACAGTCCCAAACAAACCATCTAAATTGCTAGCCTTACGAGGAAAGAAACAAGTTGGTGCTTTAACATCAGCTGAACGCGGAACTCTAGTAACAGCTGAAACTTGTATGAGTGCTGCAGGTAATTACATGCCTACGATGTTTGTTTTCCCTAGGGTAAGAGAAAACCTCCTTTTACTTGATGAAGCTCCTCCAGGAAGCTTTGCAAAGTTTCATCCTAGTGGGTGGATGCAAAGTGATATATTCCTGTTctggtttaaaagttttattgaattttccagACCATGTGCTGAAAAACCTGTTCTTTTAATACTAGATGGACATGCGACCCATACAAAGAATCTTGAGCTCATCGAGATGGCTCGTTTAAACCATGTAGTTTTACTGTGCTTGCCCCCACATTGCTCGCACCGTTTGCAACCTCTAGACGTTACCTTCATGGCACCTTTAAGCACTTTCTATCAACAAGAAGTTCGCCAGTGGCTGGCCATGCACCCAGGCAGGCCAGTGACAATTCATCAAGTTGGCAAACTCTATGGCAGCGCCTTTTTGAAAGCAGCTGTGATGCAAACAGCTGTCAATGGATTTAAACAGACAGGAATATATCCACTCAATAGGAATATATTTCCAGAAAACCTCTTTGCTCCATCATTGACCACAGATAGACCTGCGCTTGAACCTAATGTGCCAACACCAGCGAATCTACCACCTTCTGAACCCCAATCACTTAATTCACCCTGCTGTTCTCATTCCTTGCCTCCTCACACTAAAATTGTTCCCGAATCATCCTTCACTATTTCACCCTCCGAAGTGATGCCTCCCCCATACGTTGAGAGAAAAACACAGCCAAAGGAGAACAAGAGAAAAGGAAAAACCGTAATTTTGACAGACTCCCCATACAAGCTGGAACTTCAGACAGcattagaagaaaagaaaaagaagaatggagtaaaggaaaacaaagatgaagaaaagaagaaaaaagcggaggaaaagaaaaaaaaatcaaagaaaagacTACTTTTTACCGATGAAAATATAACACAGGAAGAAAATAAGCGTTCAAAAAAAGATAACAAGAAGGATAAACAACTGTTGTGTGACTCCAGTGAAGAAGAGGATACAAATTCTGCCTGCATTTACTGCAATGAACTTTACACGGATTCCAAGTATGGTGAGGGGTGGATCCAGTGCATCGAATGTCGTGGGTGGGCCCATGAAAGCTGCTCTGGGGCAGAAGAACAAGATACTTATTTCGCTTGCGACTTGTGCCAGACAGTTTCTCATAACAAATAG
Protein Sequence: MPRTYKRKTNRQSWSQQSMELAIIEVMSRRMGYKKASKAFNIPQSTLEDRVRKAKIKDLTPTQASAKGMGSYITVFSKDQEQELVDHILLMESRLFGLTLTDFRKLAYELALKNNLKNKFNQELKTAGKDWLYGFLSRHKNQLSLRTPEKTSISRAMGFNKVAVNKFFDLLESLYLKYTFSPNDIYNVDETGITTVPNKPSKLLALRGKKQVGALTSAERGTLVTAETCMSAAGNYMPTMFVFPRVRENLLLLDEAPPGSFAKFHPSGWMQSDIFLFWFKSFIEFSRPCAEKPVLLILDGHATHTKNLELIEMARLNHVVLLCLPPHCSHRLQPLDVTFMAPLSTFYQQEVRQWLAMHPGRPVTIHQVGKLYGSAFLKAAVMQTAVNGFKQTGIYPLNRNIFPENLFAPSLTTDRPALEPNVPTPANLPPSEPQSLNSPCCSHSLPPHTKIVPESSFTISPSEVMPPPYVERKTQPKENKRKGKTVILTDSPYKLELQTALEEKKKKNGVKENKDEEKKKKAEEKKKKSKKRLLFTDENITQEENKRSKKDNKKDKQLLCDSSEEEDTNSACIYCNELYTDSKYGEGWIQCIECRGWAHESCSGAEEQDTYFACDLCQTVSHNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00139522; iTF_00139523; iTF_00139492; iTF_00139500; iTF_00139502; iTF_00139503; iTF_00139504; iTF_00139505; iTF_00139506; iTF_00139507; iTF_00139508; iTF_00139509; iTF_00139510; iTF_00139511; iTF_00139512; iTF_00139513; iTF_00139514; iTF_00139515; iTF_00139516; iTF_00139517; iTF_00139518; iTF_00139519; iTF_00139520;
90% Identity: iTF_00139500;
80% Identity: iTF_00139522; iTF_00139523; iTF_00139505; iTF_00139506; iTF_00139507; iTF_00139508; iTF_00139509; iTF_00139510; iTF_00139511; iTF_00139512; iTF_00139513; iTF_00139514; iTF_00139515; iTF_00139516; iTF_00139517; iTF_00139518; iTF_00139519; iTF_00139520;