Aaln035214.1
Basic Information
- Insect
- Aphrophora alni
- Gene Symbol
- kn
- Assembly
- GCA_963513935.1
- Location
- OY740768.1:99748078-99775994[+]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.00034 11 6.6 0.0 10 35 31 57 22 81 0.76 2 2 1.1e-29 3.4e-25 90.8 0.0 38 94 244 300 231 307 0.92
Sequence Information
- Coding Sequence
- ATGTTCGGTCTTCATCATCACCATCAAGATGCGGCCGCCGCTGGTCTGCACCATCATCATCACCACCATCATCAACCTCGAGGACCCGTCACGGGTCTAAAAGAGGAACCTCTGTCAACTTCGCAACTAGCTGCTGCCAGGTCATGGATGCAACCGGCGGTCGTCGACCAAACCAGAAGGCAACGGGACCAATCTAAACCATTATCACACCACTACCACCAAGCAACCATTCCTCAGCGCATACTACCAGAAGCTAAAATGGCTGGACAAGCTGAGCATACTCCTATGGCAGGTTTCAGAGCACATCGCATCTGTGTGGACTTAATAAACAAACTCCGGATAATTTTAGAGCAGAGTGGAGAATTTCAGGCAGTTATCTACACGGCATTTATTGACTTCGAGAAAGCATTTGACTCGGTTAGCCATAGAATCTTATGGTATGTAATCGAAGACTATGGAATACCGcagaagataattaatataataaaagatctgTATGACGGGTATCAATGCCAGGTACTTCATCAAGGAAAGTTGACGCAGCCCATCTCCGTTGGAGCGGGTGTTCATCAGGGATGCATCTTGTCCCCAATCCTTTTTCTTTTGGTGTTGGATGAAGCTATGAGGAGGACAACTGGTGATAGAAGACGAGGAATTCAACGGGGATTACACAGACGTCTTGAAGATCTGGATTACGCAGATGATGTGTGCCTGCTTTCGCAGAGATACACggatatgcagtttaaTGTGGGTGTGGGCAGAGCGCACTTCGAAAAACAACCTCCCAGCAATTTACGCAAATCcaattttttccattttgtaatcgCTTTATATGACCGAGCAGGCCAGCCCGTGGAAATTGAAAGGACGGCTTTTATCGGCTTCATTGAAAAGGACCAGGTTTCTATAGTAAATGTTAAGTACTTGTTTCTGGTTCAATCTAGCGACGCAACCTCATCCTTAGAATATGTATCAGAAGAGAACTCATTGCAGCACATCCTCCTACAATACGCTGCACCAAATAACTGA
- Protein Sequence
- MFGLHHHHQDAAAAGLHHHHHHHHQPRGPVTGLKEEPLSTSQLAAARSWMQPAVVDQTRRQRDQSKPLSHHYHQATIPQRILPEAKMAGQAEHTPMAGFRAHRICVDLINKLRIILEQSGEFQAVIYTAFIDFEKAFDSVSHRILWYVIEDYGIPQKIINIIKDLYDGYQCQVLHQGKLTQPISVGAGVHQGCILSPILFLLVLDEAMRRTTGDRRRGIQRGLHRRLEDLDYADDVCLLSQRYTDMQFNVGVGRAHFEKQPPSNLRKSNFFHFVIALYDRAGQPVEIERTAFIGFIEKDQVSIVNVKYLFLVQSSDATSSLEYVSEENSLQHILLQYAAPNN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -