Asti018178.1
Basic Information
- Insect
- Aphodius sticticus
- Gene Symbol
- stc
- Assembly
- GCA_963966075.1
- Location
- OZ014508.1:36784000-36795907[+]
Transcription Factor Domain
- TF Family
- zf-NF-X1
- Domain
- zf-NF-X1 domain
- PFAM
- PF01422
- TF Group
- Zinc-Coordinating Group
- Description
- This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.47 1.2e+04 -2.1 2.2 5 10 26 31 26 31 0.93 2 11 1.1 2.8e+04 -3.3 11.5 1 11 37 47 37 48 0.92 3 11 0.78 1.9e+04 -2.8 2.3 4 10 52 58 51 58 0.93 4 11 7.8e-08 0.002 19.6 13.8 1 19 64 82 64 82 0.98 5 11 0.28 7e+03 -1.4 0.7 6 10 111 115 110 116 0.81 6 11 0.00057 14 7.2 14.0 7 19 126 138 121 138 0.78 7 11 0.081 2e+03 0.3 0.3 6 11 141 146 141 147 0.94 8 11 1.4 3.4e+04 -3.6 0.2 9 11 156 158 156 159 0.79 9 11 2 5e+04 -4.1 0.8 15 18 164 168 163 169 0.54 10 11 8.3e-09 0.00021 22.7 16.9 1 18 174 192 174 197 0.90 11 11 0.00052 13 7.3 16.2 4 19 205 223 203 223 0.93
Sequence Information
- Coding Sequence
- ATGGTCAGATGTCGTTGTGGTTATATGGACAAAGAAGTGTCCTGCTCTGAGCTTACCAGCAAGGCCGATGATGCTCGCTGTCAGAAGAAGTGCACAAAGATGAGGTTATGCTGCAAGCACAAGTGTAACCAGTATTGCTGTATCGAGGTGGACCACCATTGTACGCTACTCTGCAACCGCGCACTGTCGTGTGGACTCCACCGGTGCGAGCAGGAGTGCCACAGGGGACGCTGCGGACTGTGCCCACGCATGAGCTTCGACGAGCTGTTCTGCGAGTGCGGCGCCAGTGTTTTATACCCGCCTGTGCCGTGCGGTACTCGACCGCCGTCTTGCAATCAGCCCTGTTCGAGGCCGAGACCTTGCGGACATCCAGTGGCACATGCGTGTCACACGGGGCCTTGCCCGCCCTGCACCATCCTGTGCAAGCGGTGGTGCCATGGCAAACATGAGCAACGAGGGACAATATTGTGTCACCAGGATGAATTTAGTTGCGGTCTACCCTGCGGAAAAGATCTTCCATGCGGGCAGCACAAATGCATCCAGCCGTGCCACAAGGGCTCCTGTCCGTTGCCTTGCGTTCAGCCGTGCCCTAAGCCACGCCCAACCTGTGATCATCCTTGTAATCAGCCTTGTCATCCGGAAGGTCCGTGTCCGGACAGTCCTTGCCGTCAGACGGTACGAGTCACATGCCAATGTGGCCTACGTTCCAGCTCGAGGGCTTGCGTGGACTTAGCCGGCGAGTATCAGGCGATTGCAATGTCACAACTTGCCTCCAAGATGGCAGATATACAAAAAGGTCAGACCGTGGATCTGAGCGACATTGTTAGCGGGCAGAGGAAGCATGTTACGCCAAAAACTCTGGAATGCACAGAGGAGTGTCGTGTTGTTGAACGCAACCGACGACTGGCTATAGGACTCCAGATCCGTAATCCGGATTTAAGTGCGAAACTAACCCCTCGGTATTCGGAGTTTATGCGCGGATGGGCCAAAAAGGACCCCAGATTCTGCCAACACGTCCACGACAAACTATCCGAGTTAGTACAGCTTGCCAAGCAGAGCAAACAGAAGAGCCGTTCCCATTCGTTTGAGACGATGAACAGAGACAAAAGGCATCTCGTGCATGAGTATTGCGAGCATTTTGGCTGCGAGAGTGAGGCTTACGACGCAGAGCCAAATCGAAACGTTGTTGCCACCGCGTTTCGAGATAAATCGTGGCTGCCCAGCGTTAGTTTGTTCGAGTTGATACAGAGGGAGAACGGGCAAAGGAAAGTTCCGGGGCCCATGGTCAGTGCGAAGAGCGTTATTCCGAAGAGGGAGGTAACCTCATTCAAAGTTAGTACGAGACCAACCAGACCCTCAACACCTCCTGCAGAATACGTGGATTATTTTGACGATCCCCCTGTATGA
- Protein Sequence
- MVRCRCGYMDKEVSCSELTSKADDARCQKKCTKMRLCCKHKCNQYCCIEVDHHCTLLCNRALSCGLHRCEQECHRGRCGLCPRMSFDELFCECGASVLYPPVPCGTRPPSCNQPCSRPRPCGHPVAHACHTGPCPPCTILCKRWCHGKHEQRGTILCHQDEFSCGLPCGKDLPCGQHKCIQPCHKGSCPLPCVQPCPKPRPTCDHPCNQPCHPEGPCPDSPCRQTVRVTCQCGLRSSSRACVDLAGEYQAIAMSQLASKMADIQKGQTVDLSDIVSGQRKHVTPKTLECTEECRVVERNRRLAIGLQIRNPDLSAKLTPRYSEFMRGWAKKDPRFCQHVHDKLSELVQLAKQSKQKSRSHSFETMNRDKRHLVHEYCEHFGCESEAYDAEPNRNVVATAFRDKSWLPSVSLFELIQRENGQRKVPGPMVSAKSVIPKREVTSFKVSTRPTRPSTPPAEYVDYFDDPPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -