Asti028686.1
Basic Information
- Insect
- Aphodius sticticus
- Gene Symbol
- ZBTB2
- Assembly
- GCA_963966075.1
- Location
- OZ014510.1:23961946-23970433[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.00032 0.025 16.4 3.3 1 23 115 137 115 137 0.98 2 11 0.005 0.38 12.7 1.4 1 20 216 235 216 238 0.95 3 11 0.22 17 7.5 0.1 1 19 242 260 242 261 0.85 4 11 0.0019 0.14 14.0 0.8 1 23 328 350 328 350 0.98 5 11 0.0055 0.42 12.6 1.6 1 19 356 374 356 376 0.96 6 11 0.0016 0.12 14.3 3.4 1 23 391 413 391 413 0.98 7 11 1.3e-05 0.001 20.8 0.7 1 23 419 442 419 442 0.98 8 11 5.4e-06 0.00042 22.0 0.8 1 23 448 471 448 471 0.97 9 11 3.1e-05 0.0024 19.7 0.8 1 23 480 502 480 502 0.97 10 11 6.4e-05 0.0049 18.6 0.9 1 23 508 530 508 530 0.98 11 11 1e-05 0.0008 21.1 3.7 1 23 536 558 536 558 0.98
Sequence Information
- Coding Sequence
- ATGGCTATTGCATGCCGACTGTGTTTAAGTTCTAGTGCAAGTCACTATGAAGCCATAGCAGCAATAGAAGAAAAATATTTCCAGCTAATTCTACCAGAAATTGATATCCAGTTGGTACAGTCACCAATGTTCTGTCAGAGTTGTATAGAATTACTACAGACCACCTATTCATTTAAGAATTTGGCAGGAGCGGATTTACACACTTGTCCTGGAAATGAGAAACAATctgaagaaaaaacaataaactcTGAGGTTGCGATGTCACAAAAAACTACCTGTACGGAGAGTTCCGAAGATGTAAACAACCAAAATTTGGATGGAACAATCGATTTGAGAAGACCATTCAGATGTAAAGACTGCAGTAATTCTTACAGCAAGAAGCAACAGTTAATTACGCATCTTAAGAGACACTTCGAACATCCGCACTGTTTCACCTGCGATAAAGATATCAGCAACCGTTATGGGTTGAAGTGCCATCTATTAAAGGTACATAAGATTGAAATGAACGAGGAGCATGTGGAGGAACTCTACACATTGTACTTAGATAAAGAAAAATTAGATGAATgcgtacaaaaacatttagATTTATATAAGTGGATGGAAGATGTTGAAGGAGGAGAAAATTTCAATTCAGAAGACAAACCATACAAATGTAACATGTGTGAGAAAGCTTATGCCACGAGGAAATGCCTCCTAACGCATGTCCCACTACATTTTACGAAATATGATTGCAAACTCTgcggaaaacaattttttattgcagCTGCGGTAAAAAGTCATCTATGGAATGTTCACAAACTTGGCAGAAACGACGACAATTGGCGTGATCACATCACGGTCACAGTAGATGAACTGGACTTGAATGAAGCCATAAAAGAACACAACAAGCTAGAAAAGattgaaaatgataaaaataaatctgattCTTATGAAGACCAGTTAGAGGTAGCGAAAACGTCAATTGCTTCTCAAGCGTCCAGATACGTTTGTGAAAAATGTGGGCAACAATTTGGGGCCACGTCCTCATTCAATAGACATAAATTAAGTCACGATAGCAAAAAATTGTTCATCTGTGAACACTGCAAAGAAGGATTTGTAACAAAAGCGTGTCTTGAAAAGCACAATTTGCTGTGCCAGAGAGATAGTTCTAAACGTGAACAAGATTGTAATTTTACTTGCAATACTTGCGGCgtgtcaatatttcataaatcaaAGTTTATCGAACATATGCGAAAACATGCCAGCGAAAAGCCTTATAAGTGCAACGTGTGTGATAAAGCGTTTGCTCAAAGAAGTTCTTGGGTTTCGCATAAGAAAAAGGTACACATAACTGAGCGATTATTTAGCTGTGATTATTGCAATAAATCGTTCACACTGCAAGGAACTCTAGGTAAGCACATTAGATCAGTGCACATGAAGGGTGCTATCGAGAagaaatttatttgtaattattgtGGGAAGAAATTCGTCTTGTTGAACCAGTTGAACACCCATTTAAAGTGGCATTCGTCTGATAGAGAATACAGCTGTGATCTGTGCGAGAGAAAATTTGTGGATAATTCCTCGGTAAAGAAGCATAGAGCAACCCATTTTGCGGAGAAGAAACACAAGTGCGAAATTTGTGGTAAAGGGTTTCATCAGAAATATAATATTAAGGTTCATATGAAGGTTCATTGTACAGTACCTTAA
- Protein Sequence
- MAIACRLCLSSSASHYEAIAAIEEKYFQLILPEIDIQLVQSPMFCQSCIELLQTTYSFKNLAGADLHTCPGNEKQSEEKTINSEVAMSQKTTCTESSEDVNNQNLDGTIDLRRPFRCKDCSNSYSKKQQLITHLKRHFEHPHCFTCDKDISNRYGLKCHLLKVHKIEMNEEHVEELYTLYLDKEKLDECVQKHLDLYKWMEDVEGGENFNSEDKPYKCNMCEKAYATRKCLLTHVPLHFTKYDCKLCGKQFFIAAAVKSHLWNVHKLGRNDDNWRDHITVTVDELDLNEAIKEHNKLEKIENDKNKSDSYEDQLEVAKTSIASQASRYVCEKCGQQFGATSSFNRHKLSHDSKKLFICEHCKEGFVTKACLEKHNLLCQRDSSKREQDCNFTCNTCGVSIFHKSKFIEHMRKHASEKPYKCNVCDKAFAQRSSWVSHKKKVHITERLFSCDYCNKSFTLQGTLGKHIRSVHMKGAIEKKFICNYCGKKFVLLNQLNTHLKWHSSDREYSCDLCERKFVDNSSVKKHRATHFAEKKHKCEICGKGFHQKYNIKVHMKVHCTVP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00981507;
- 90% Identity
- -
- 80% Identity
- -