Basic Information

Insect: Aphodius sticticus
Gene Symbol: clz9
Assembly: GCA_963966075.1
Location: OZ014506.1:8194261-8219488[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.99 76 5.5 0.5 3 23 311 330 310 330 0.95

2 11 2.9e-06 0.00022 22.9 2.0 2 23 1070 1091 1069 1091 0.97

3 11 0.00092 0.07 15.0 0.2 1 23 1097 1119 1097 1119 0.97

4 11 0.0021 0.16 13.9 2.0 1 23 1125 1147 1125 1147 0.98

5 11 8.9e-05 0.0068 18.2 1.5 1 23 1153 1175 1153 1175 0.98

6 11 3.3e-06 0.00025 22.7 0.1 1 23 1181 1203 1181 1203 0.98

7 11 3.6e-06 0.00027 22.6 0.9 1 23 1211 1233 1211 1233 0.98

8 11 0.009 0.69 11.9 0.1 1 23 1239 1261 1239 1261 0.96

9 11 5.5e-05 0.0042 18.9 1.3 1 23 1267 1289 1267 1289 0.98

10 11 0.0014 0.11 14.5 0.5 1 23 1295 1317 1295 1317 0.98

11 11 1.8e-05 0.0014 20.4 2.2 1 23 1323 1345 1323 1345 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.99	76	5.5	0.5	3	23	311	330	310	330	0.95
2	11	2.9e-06	0.00022	22.9	2.0	2	23	1070	1091	1069	1091	0.97
3	11	0.00092	0.07	15.0	0.2	1	23	1097	1119	1097	1119	0.97
4	11	0.0021	0.16	13.9	2.0	1	23	1125	1147	1125	1147	0.98
5	11	8.9e-05	0.0068	18.2	1.5	1	23	1153	1175	1153	1175	0.98
6	11	3.3e-06	0.00025	22.7	0.1	1	23	1181	1203	1181	1203	0.98
7	11	3.6e-06	0.00027	22.6	0.9	1	23	1211	1233	1211	1233	0.98
8	11	0.009	0.69	11.9	0.1	1	23	1239	1261	1239	1261	0.96
9	11	5.5e-05	0.0042	18.9	1.3	1	23	1267	1289	1267	1289	0.98
10	11	0.0014	0.11	14.5	0.5	1	23	1295	1317	1295	1317	0.98
11	11	1.8e-05	0.0014	20.4	2.2	1	23	1323	1345	1323	1345	0.99

Sequence Information

Coding Sequence: ATGGCGGACGCTACAAGGTATACGGATTTATGCAGAATTTGTGGTGAAAAGACAACAGATATGTTGGCcgtgaacatttttgaaaacGAAGGAACCGTGCGACAGCTTGATAAAAAGATCGAAGAGTGTCTTCCCGTTCAgGTACACGAAGCTGACCAACTTCCCAAAATGATCTGCGAACAGTGTGTCTATAAACTAGATCTATTTTTCGACTTCCGGGAACGAGCTTTACGAACAGAAAACTTACTCATCCacttatataaacaatttaCTCCCGCCCAAGCAGAACAATTGAAAATGGAGGAATTAATGTTAGTACAGCAGCACCATTTGTTGAATGAAGTCAGCGAATTGGAGTTGAATCAATTGGAGCATAGGGATTCGATGATTGTCGACCAGCAAATTATCGATATGAACGGTCATACGTTGTCTGGTATTGAATTGAGCCATCCTGAGTTGATTAAGAGTTTAAACAGTCATCCAATCGTTCAGGGTAACATGTTGGTTAGTAGTGCAAATGTCATGCAGAGCCATAGGTATGCCGAAGATTTGCTACATCAGGATCATCAGATGGCGTATACAACGCAGACGTATTCGTTAAATGATATTACTTTGAGTAGTGACGCTATTCAGGACAAGcACATAAATCAAGACATTCAAGACGTGTTGGTCGTAGAAACAAATCTACAAAAGTCCATAGATCAAAATCAGCGGATTGACAAAAGGGAGTTTGAGATTGACGTTTCCGAGTCTCAAATATTAGGTGACTCCTACAAGCAACAAGAATACGTAAAGCAAGAAGACAGTAATAGCGAATGCCGATTATTAATCGACGAACCACAGCCAACTTTATTCGTTGGAGTGGATTGCGATAACGGTCAAGAGGAGAACGACGTTGACGATGATTTTTCACAGCCGGAACTCGAAATGTGCAATATCTGCAAGACTTCCGTCGTCAAGGATGAATTTAACGCGCATTACAAGCAACATTTCGTAAAGTGCATCGTCTGCAGTGCTGTTCTGCCTAATAAAGAAGCACTGGACGCACATTCTAAAGATGTTCATGGGGATACTGTGGAAAAAATTAAAcATATAAGTCGCCAACACGTCTGGCCTCCACGAGCAAGAAAATATGATCAAGATACCTTGCGTTCTGCAATTGAAGCCTGCAGGAATGGAATGTCTTTGAAAAGGGCCTCCTTGATTTATAATGTGCCCAGAAGCACGTTGGTGTCCCACGTAAAAGGATGGAAAAACCGCCCGTCTGCATCTCAACCAACTGCAGGACGAAAAATAGATTTGCCAGTCGACGTTGAAGAAGCAATATTcaaaaatattagtctcatGAATAAATGGGGGTTCGGTTTGAACCGTATGGAAATTCTAAATTTAGTAGCTGCGTTTGTTGACGAGCACAAAATCAAAACACGCTTCAAAGATGGAAAGCCAAATGGGACGTCACTATGCAGTGATCCCACAAATACTAAAGTTGTTGCAACGAGAAGTAATACATCCGTCTTATTTTGCGTTTCGGCATCCGGAGGAAAATTACCaccttatattttatatatagcaaAACACTTATGGGATCCATGGATGCCTGATAGTGCGTATCCTAATACAGGGTACGCTGTAACCCGGAATGGATGGATGACTGAAGAAATATTCTACCATTGGTtcaaaaaccattttattaaaaattgtccGGAGGATCGGccgttgttattaatttttgacgGTCATTCGTCTTACAATTCGATCAAGCTTATTGAGCTAGCCCGTAAAGAAAAAATTACCCTACTAAGGACACCGCCGCACACAACACACATCCTACAGCCGTTGGATGCTGTTGCGTTTGGGGTGTTTAAGACGAAATGGGATGAAGCCGTAACAAACTGGCAACGACTCAATTACGGCAGTGTTATGTCGAAAACGAATATATCCACTTTAGTCGGCGAAGTATGGTCCAACCTCCCAAGGTCGATTATCCAGAAATCTTTCGAGGCAACGGGGCTATACGACAGTTACATGGATAATCCGATAAATCGAGGTGCCATTAAAAATACTGCCTTCAAACAAGATGATCTAGAGAAGAGGCAATACAGAACTACAGAAGTGTGTACAGAAGCTTCCAGTAGTACAACCACCaacacacaattgacagaagAATTATTTCTGCGAAAGATTAGTCGTCGGTCCACACTGAcaccaacaaaaagaaaaaaagttaacaactccTCACATGCGTTTAAAAAGAAGCCGAATAAGAAAAGTACAATTTTGCTAGAAAGCAGTGACGAAAGTGATGATTCGAATAGTGTAGCCAATGACAGTGATGATATTGAAACATTGGAAGATTTAACACTGGAAAGTGAAGAAACGGAATCTCACATAAGAGAATTTGATGAACCGAAACAAATGGCTGTAGACACATGGGCAATTGTTACGTACGCTACAAAGAAGACCGTAAAACGATACGTGGGAAGAATTATAGCAATCAATAAAGACGACACTGTAGACGTCGATTTTGTCCGAAGGAAAAAGGATTTTTTTGTCTGGCCAGCTATCCGCGATCGGGATACCGTACATGTCGAAATGACTGACGTTCCATACTTTAGTGATACTGAATTACATAATGAAGAACCGCCAAAGAGACCAAAACGAGCAATACCTAAAATATGGAAATACGAGTGTACTTTTGCTAACGAGCAGGAAGCACTTGATTTTATCAAGACGGAGTATTGCTGgtcattaaaaaatacaaatcacAACGTAAAAGGTACGATTAAATATTACCGTTGCAATAAAGTTAAGGCCCGCGGAGACCAGTGCAGAAGTGGCTTAAAATTAATATTCGATCCGAAATGCACTGAAGTTGTGTTGCATAGATTAGAAACGGATCATAATTGTGATAGAATTGCAACCAAAGCAGGTGTTGGTATTTCTGAAGAAATTAAAACAGACATTGAAGATATGTTTAGAAAGAAGTTTAAGCCGAGAGCTATATTGGATATGCTCATTGTGAAGTATAAACTTCCGCCAAATATTGTACAACAAAACATTAAGAATAGATTAAAGAGGACGACACGTAAAAGTAACGACACTGAGAGCGAAAACGAAGATGAGACGGAAGAAAAGAATAAAGGTACCAACGAAGATGACGAGATCGACAAAGCTTTACAGCAGCAGATCCGAGGTTTTCCTAAAGTGTGCAATTATTGCGGAAAATCGTATAAGAGCAATTATAAACTTTCAGAACATATGCGCAAACACACTGGCGAAAAACCTTTTAAATGTGGCTCCTGCGACAAGGCGTTTCGTTCTAAGATCGGCTTGGCTCAGCACGAAGCAAAACATACAGgTATGTACGATTACGCGTGCAGCACGTGTGGTAAAGGATTCCAGTGTAAGAGTTATCTGATGGTACATCAGAGGGTACATTCCAACGTTAAGCCGTATCCGTGTACGACGTGCGGGCAAAATTTCAAGTCGAAGCAATCTTTGATGGACCATACTAATAGGCATTTAGGGGTAAAGCCGTATATTTGTGATATTTGCGGAAGGGGGTTTATTACGAAAGGTTTGTTGAGGGCGCATCAAAAAATACATACCGGTGAAGATAATCGGAAGTATTCGTGTGCCGTTTGTAGTAAAATGTTCGTGTCTAAGAGTTACTTGCAAACGCACATGAAAATTCATACGGGTGAAAAGCCGTTTCCTTGTGAGGTTTGCGGCAAAGGATTTCTAACTCGCGTAGACCTTCGTATACATTCAACAATGCACACAGGTGAAAAATCCTATATGTGTGAAATATGTGGCAAAGCATTTGCGAGGAGAGACGCGTTACGATGTCATAGGAGATCACATACTGGTGAACGTCCTTACACATGTGATCTTTGCGGTCAAACCTTCACACAATTCTCTCCAATGGTGATACACAAAAGGTTGCACACTGGAGAGCGGCCTTACACATGTGAAGTATGCAACAAAACGTTTATAACCAGATCTACGATGATGACGCACCTCAAGAAGCACAACGTTAAGCAAGAGAACGGCTAG
Protein Sequence: MADATRYTDLCRICGEKTTDMLAVNIFENEGTVRQLDKKIEECLPVQVHEADQLPKMICEQCVYKLDLFFDFRERALRTENLLIHLYKQFTPAQAEQLKMEELMLVQQHHLLNEVSELELNQLEHRDSMIVDQQIIDMNGHTLSGIELSHPELIKSLNSHPIVQGNMLVSSANVMQSHRYAEDLLHQDHQMAYTTQTYSLNDITLSSDAIQDKHINQDIQDVLVVETNLQKSIDQNQRIDKREFEIDVSESQILGDSYKQQEYVKQEDSNSECRLLIDEPQPTLFVGVDCDNGQEENDVDDDFSQPELEMCNICKTSVVKDEFNAHYKQHFVKCIVCSAVLPNKEALDAHSKDVHGDTVEKIKHISRQHVWPPRARKYDQDTLRSAIEACRNGMSLKRASLIYNVPRSTLVSHVKGWKNRPSASQPTAGRKIDLPVDVEEAIFKNISLMNKWGFGLNRMEILNLVAAFVDEHKIKTRFKDGKPNGTSLCSDPTNTKVVATRSNTSVLFCVSASGGKLPPYILYIAKHLWDPWMPDSAYPNTGYAVTRNGWMTEEIFYHWFKNHFIKNCPEDRPLLLIFDGHSSYNSIKLIELARKEKITLLRTPPHTTHILQPLDAVAFGVFKTKWDEAVTNWQRLNYGSVMSKTNISTLVGEVWSNLPRSIIQKSFEATGLYDSYMDNPINRGAIKNTAFKQDDLEKRQYRTTEVCTEASSSTTTNTQLTEELFLRKISRRSTLTPTKRKKVNNSSHAFKKKPNKKSTILLESSDESDDSNSVANDSDDIETLEDLTLESEETESHIREFDEPKQMAVDTWAIVTYATKKTVKRYVGRIIAINKDDTVDVDFVRRKKDFFVWPAIRDRDTVHVEMTDVPYFSDTELHNEEPPKRPKRAIPKIWKYECTFANEQEALDFIKTEYCWSLKNTNHNVKGTIKYYRCNKVKARGDQCRSGLKLIFDPKCTEVVLHRLETDHNCDRIATKAGVGISEEIKTDIEDMFRKKFKPRAILDMLIVKYKLPPNIVQQNIKNRLKRTTRKSNDTESENEDETEEKNKGTNEDDEIDKALQQQIRGFPKVCNYCGKSYKSNYKLSEHMRKHTGEKPFKCGSCDKAFRSKIGLAQHEAKHTGMYDYACSTCGKGFQCKSYLMVHQRVHSNVKPYPCTTCGQNFKSKQSLMDHTNRHLGVKPYICDICGRGFITKGLLRAHQKIHTGEDNRKYSCAVCSKMFVSKSYLQTHMKIHTGEKPFPCEVCGKGFLTRVDLRIHSTMHTGEKSYMCEICGKAFARRDALRCHRRSHTGERPYTCDLCGQTFTQFSPMVIHKRLHTGERPYTCEVCNKTFITRSTMMTHLKKHNVKQENG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00137838; iTF_00981480; iTF_00980883;
90% Identity: iTF_00137838;
80% Identity: iTF_00137838;