Asti028687.1
Basic Information
- Insect
- Aphodius sticticus
- Gene Symbol
- ZNF131
- Assembly
- GCA_963966075.1
- Location
- OZ014510.1:23976113-23978838[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 14 0.00028 0.022 16.6 1.9 1 23 185 207 185 207 0.98 2 14 0.0023 0.18 13.7 3.7 3 23 213 234 212 234 0.94 3 14 4.9e-05 0.0038 19.0 0.8 1 23 309 331 309 331 0.99 4 14 1.7 1.3e+02 4.7 0.1 3 23 337 358 335 358 0.83 5 14 0.053 4.1 9.5 4.2 1 23 412 434 412 434 0.97 6 14 3.7 2.8e+02 3.7 0.8 3 10 440 447 438 461 0.83 7 14 7.3e-06 0.00056 21.6 1.3 1 23 522 544 522 544 0.98 8 14 0.0021 0.16 13.9 1.5 3 23 552 573 551 573 0.93 9 14 6.7e-05 0.0051 18.6 0.8 2 23 577 598 576 598 0.96 10 14 2.5e-07 1.9e-05 26.3 1.0 1 23 604 627 604 627 0.98 11 14 0.00011 0.0085 17.9 0.5 1 23 633 656 633 656 0.95 12 14 0.00039 0.03 16.2 3.6 1 23 665 687 665 687 0.97 13 14 6.7e-06 0.00052 21.7 0.8 1 23 693 715 693 715 0.98 14 14 5.3e-05 0.0041 18.9 4.0 1 23 721 743 721 743 0.98
Sequence Information
- Coding Sequence
- ATGACCCCTGTTTGTCGACTCTGTTTAAGTTCGAGTGCAAAACAGTACAAAACCATAACAACAATAAGAGAGAAATTCCAGTTGATACTGCCAGAAATTGATATCCACTTGGTACAGTCACCGATGTTCTGTCAGAATTGTGTTGACCTACTACAGACCACCTATTCATTTAAGTGTAAATGCATCAAAACAGAGAAAATGTTAAAGTTGTATGCTTTGAACTGTGGAGGCAGAAAATTATTGCTCAGCGATTTACTTCAAAGCAATTGGTTGGAACAAAATCAGATACAGTCTGCTAACAATGACACAGAGGCTGCATGTAGCAAAGATATTAAATCGAAGTGTGATAATGATAGTTTTGGATGTGATTTAGATTTGCCAGGAGATTTTCAAAGTTGCCCTGAAATTGAGATAAAAGTTAATGAAACAGAAATAACCTTTGAGGGGAGACAAGAACTTCCACTATGCGGATCCTTTAAAAGTACATGTAACGGGAGTTCTGGTGATGAAAGCAACAAAACGTTGAATGGAATACAAGATTCTAAAAGACCTTTCCGATGTGAAGACTGCGGTAATTCTTTCCACAAAAGAAAATCGTTAATGGATCATATCGAGATGCATTACGAACAACCTCACTGTTTCACCTGCAATAAAACTTTTAGCAACCGTTTTGGGCTAAAGCAACATctattaaatatacatacaatTGAAATGAGTGAGGAGCATGAACAACTTTATACCATGTACCTAGATAAAGCTAAACTTGATGATTGTATacagaaacatttagaaaaatatgagaGCGTGGTCGATGTTAAAATAGAAGACTGTTCCGATTCAGACGAAGAAGCTTTGAAAAAACACAGTATAGAGGAGATAGTCAATGAGGAAAATAATTCTGATCAACACAAGGTAGATAGACGATACAAATGCAGTATATGTGAGAAAggatataataagaaacaatatCTTCTGGATCATATCCGAATTCATTTTACCAGATCTAATTGCAATCTCTGCGGTATAAGATTTTATAACGTTGGGGTATCAAAGCGCCATCTACTGGTTGTACACCAAATTGATACCGATGATGACGTACGTTGGCGTGACCTTATCACCGTCTTAGTGGATGTACCAGAGATGGAAGAAGCCTTGAAACAACACAGCAAACTATATGAGATGgacaataatgaaaataaatccaATTGCAATAAAGACCAATTAGATAGAGCTTACAAGTGCAACATATGCAAGAAAACTTACCACAAGacaaaaattctccaaaatcATATACAActtcattttaccaaaactcATTGCAAAGTCTGTGGAAAGGAATTTTTGAATGTTGCAGCGTTGAAGTGTCATCTACCAACTGTACACCAAATTGATGTAACCAACGACGACACTTGGCGTGACCACATTGCGGTCATAGTGGATGTACCGGAGATGGAACAAGCCTTGAAAGAACATGAAAAGCTGGGAGAGATGGATGATGGAAATGTATCTGATTCTTATGAAGATCAATTTGACAATTCCTCAATTGCTCCAGTATCACATAATTACACATGTGAAACCTGTGGGAAACAGTTTAGGGCCAAATCATCACTGAACAGACATAAATTAATTCATGGTGTTAAAAAATCAGCAATCTGCGATTACTGCCAAAAAAGATTTGTAACTAAAGAGAGACTCGAAATGCATATTTCTGCATGCCACCCCAACCTTATGTGCGATACTTGCGGATACACAACTACTAGAAAAAACAACTTCATGGACCATATACGTATACATACTGGTGTAAAACCTTATAGATGCAACTTATGTAATAAATCCTTTGTGCAAAGCAGTTCTTTGGGTACGCATATGCGAACGGTACACTCAACAGAGCGATTATTTACGTGCGAATATTGTAGTAAATCGTTCAAGATTAAAGGACCTCTTACCAAGCATATTCTAGAAGTGCACTTGAATGATAAAATTGAGAAGAAGTTCATATGCAATTACTGTGGGAAAAAGTATCGATTGCAATGCAGCTTGAACAGCCATTTGAAGTGGCATAAGTCAGATAGGCCATTCAGCTgcgatatctgcaaaaaaacatttgtaaaTAATCCCGCGCTAAGGAAGCACAAAATTACCCATCTTGCGGAAAAGGAACACAAGTGTGATATTTGCGGTAAGGGTTtccattataaatataatatcaaGATACATATGAAGGTTCATGGTATACAGTAG
- Protein Sequence
- MTPVCRLCLSSSAKQYKTITTIREKFQLILPEIDIHLVQSPMFCQNCVDLLQTTYSFKCKCIKTEKMLKLYALNCGGRKLLLSDLLQSNWLEQNQIQSANNDTEAACSKDIKSKCDNDSFGCDLDLPGDFQSCPEIEIKVNETEITFEGRQELPLCGSFKSTCNGSSGDESNKTLNGIQDSKRPFRCEDCGNSFHKRKSLMDHIEMHYEQPHCFTCNKTFSNRFGLKQHLLNIHTIEMSEEHEQLYTMYLDKAKLDDCIQKHLEKYESVVDVKIEDCSDSDEEALKKHSIEEIVNEENNSDQHKVDRRYKCSICEKGYNKKQYLLDHIRIHFTRSNCNLCGIRFYNVGVSKRHLLVVHQIDTDDDVRWRDLITVLVDVPEMEEALKQHSKLYEMDNNENKSNCNKDQLDRAYKCNICKKTYHKTKILQNHIQLHFTKTHCKVCGKEFLNVAALKCHLPTVHQIDVTNDDTWRDHIAVIVDVPEMEQALKEHEKLGEMDDGNVSDSYEDQFDNSSIAPVSHNYTCETCGKQFRAKSSLNRHKLIHGVKKSAICDYCQKRFVTKERLEMHISACHPNLMCDTCGYTTTRKNNFMDHIRIHTGVKPYRCNLCNKSFVQSSSLGTHMRTVHSTERLFTCEYCSKSFKIKGPLTKHILEVHLNDKIEKKFICNYCGKKYRLQCSLNSHLKWHKSDRPFSCDICKKTFVNNPALRKHKITHLAEKEHKCDICGKGFHYKYNIKIHMKVHGIQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -