Asti028695.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Aphodius sticticus
Gene Symbol
BCL11B
Assembly
GCA_963966075.1
Location
OZ014510.1:24014470-24017984[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.088 6.7 8.8 2.3 1 23 130 152 130 152 0.97
2 22 1.4e-05 0.001 20.8 1.8 2 23 157 178 156 178 0.97
3 22 0.26 20 7.3 0.2 2 23 188 209 187 209 0.97
4 22 0.011 0.87 11.6 0.9 1 23 213 236 213 236 0.97
5 22 1.1e-05 0.00087 21.0 2.7 1 23 297 319 297 319 0.99
6 22 0.0019 0.15 14.0 1.1 3 23 325 346 324 346 0.94
7 22 2.4e-05 0.0019 20.0 2.7 1 23 402 424 402 424 0.99
8 22 1.2 93 5.2 0.3 3 22 430 449 429 451 0.88
9 22 0.00042 0.033 16.1 5.1 1 23 505 527 505 527 0.99
10 22 0.0013 0.1 14.5 1.1 3 23 533 554 531 554 0.96
11 22 0.00039 0.03 16.2 0.8 1 23 705 727 705 727 0.99
12 22 0.00024 0.019 16.8 1.1 3 23 733 754 731 754 0.96
13 22 0.00077 0.059 15.2 3.5 1 23 808 830 808 830 0.99
14 22 0.5 39 6.4 0.2 3 22 836 855 835 857 0.89
15 22 8.1e-06 0.00062 21.5 2.7 1 23 910 932 910 932 0.99
16 22 0.014 1.1 11.3 0.8 1 20 937 956 937 958 0.94
17 22 0.0013 0.099 14.5 0.3 1 23 973 995 973 995 0.98
18 22 8.4e-05 0.0064 18.3 0.3 1 23 1001 1024 1001 1024 0.98
19 22 1.1e-05 0.00083 21.1 1.2 1 23 1030 1053 1030 1053 0.98
20 22 0.39 30 6.7 3.6 1 23 1062 1084 1062 1084 0.97
21 22 2.2e-05 0.0017 20.1 1.6 1 23 1090 1112 1090 1112 0.98
22 22 5.8e-05 0.0045 18.8 3.8 1 23 1118 1141 1118 1141 0.97

Sequence Information

Coding Sequence
ATGACTTCTATATGCCGACTGTGTTTAAATTCTAGTGCAAACCACTACGAAACCATAGCAACAATTGAAGAAAAATATTTCCAGCTTGTACTACCAGAAATTGATATTTACTTGGTACAGACACCGATGTTCTGTCAGAGTTGTATAGAATCACTACAGACCACCTATTCGTTTAAGAGTACCTGCATGGAAACAGAGAAAATGTTAAAACTGTACGCTTTGGAGTGCGGAGAGGAAGATTTATTGCTGAGCGATGTACTTCAATTTCAGGAAACAAATCAGATACTTTCTGGTAACAATTACGCTGAGGGTCTACTAACTAAACAGATTAAAGTTGAATGCGATAATGATGGTTTCGGATGTGACTCTGATATGTCATATGATACATTTTCATGCAACTTATGCAAAGAGAATTTTGACTCGGATATTCAGCTACACAACCATACGAAAGAGCATAAAAAACCATTAAAGTGTAAAATCTGTGAGATAAGCTTTCGAAGTAATTATACTTTAAAAAGACATGAAAGAAGCCATGCTGTGACCCTTGGTAATAAGCAATTACAATGCAATATTTGTAAAGTCATATTAGATGATAAGAATAAGTTAGGAGATCATTTGAAAAGCCATTTCCAAACATATGTTTGTACACTTTGCGATAAATTGTATTCCGACGAGGTGTCGATATGTAAACATCTGTCCACAATTCATGAGATTAAGCTGGATTTGGCAGAACAGGATTTACGACGTCGACCTGAAATTGAGATAATACTAGATGAGGTAAAATTAAAACAGCAACTCGCACTGTTTGAATCTCCTAATGATACATACAAGGACAGTTCTGATAATGAACACAAAAAATTGACCGAAATAATGGATAGTAACACTCCTTTCCAATGTCAAGACTGCGGTAATTCTTTCTGCCAAAAGAAATTGTTAATTGATCATATAAAGACACACTATGAGCAACCGTACTGTTTAACCTGCGATAAAGCATACGCCAACTATAAAGGGCTTAAGCGCCATATGTTACACGTGCATAAAATTGACATAAGTAAAGAGCATGAGGAACAACTTTACACAATGTACCCAGAAAAAGAGAAGTTAGATGAAAGTATACAGAAACATTTAGAATTATATAAGAGCATTATAGACATTGAAGGACGAGAAATTTCCAAACCCGATGAAGATCAGCAGGTTCGACCATACAAATGCAAGATATGCAAGAAAACTTATCACGTAAAAAGCAGTCTTTGGGATCATATCCGAGTTCATTTTACCAAATCTGATTGTAAACTTTGCAGGAAGCAGTTTTATAACATACTGGTGTTAAAGCGCCATCTAGTGGCTGTTCATCAAATTGATTTAGGTGATGATATAACTTGGCGTGACTACATCTCGGTTATAGTAGAGGTTGCAGAGATGGAAGAAGCCTTGAAAGAACACAGTAAGATTTACGAAATGGATGACGGTGAACATAATTCTGATTCCGATGAGGATGATCTAGATAGACAATATAAATGCAATATATGCAAGAAAAATTTTCACAGGAATAGAAGGCTTCGGGATCATATCCGACTTCAttttactaaatccaattgcaaACTCTGCGGAAAACAGTATTATAACACATCGGTGTTAAAACGCCATCTAATGAAAATACATCAAATTGATTTAGGCGATGATATAACTTGGCGTGACCACATCTCTATTGTAGTGAATGTACCAGCAATGGAACAGGCTTTGAAAGAACATGACAAGCGAGAAGAGATGAACCATGGTGAAAGTAAATCTGGTTATGATAAAGACCCATTAGAGTTGGTTGACAATGCTCCTACTGGCTCCCACTCACGCACATTTTTCGGAAAATTGTATCCGGATAAGTCTTTGATATTTGAACCAGAAAACGATTTACAAACTCAACCGGAACTTGAGATAAAAGTTGAAGAAAAACTAATAAACTCCGACGTGTATGAAATGAACGTAGATCATGAGGAGCAACAAGAAAAGATAGATGAGAGTATGCAGAAACATTTAGAATTACATGGGAGCATGGTGCATGTAAAAAGAAGGGAACATTCTGATGCAAAATCCAAAAATGTTCACAATCGACCATATAAATGCAACATGTGCGAGAAAGATTATCTCAACAAAAGAAATCTTGCGAATCATATCCGAATTCACTTTACCAAATCGAATTGCAATCTATGCGGAAAACGATTTTATAACGTTTCGGTGTTAAAGCGCCATCTAATGAAAATGCATCAAATCGATTTAGGTGATGATGTAACTTGGCGTGACCATGCCTCTATTGTAGTGGATGTACCTGAGATGGAAGAAGCTTTGAAAGAACACAGCAAACCAAAAGTAATTGATAATGACGAACATAAATCTGGTTCTGATGAAGACCAATCAGGTAGACCGTACAAATGCAAGTTATGCAAGAAAGCTTACCACAATAAGAAAGGTCTACTTGATCATATCCGAAATCACTTCACCAAATCCGATTGCAAACTCTGCGGTAATCGATTTTACAATGTACCGGTGTTAAAGCGCCATCTAGTGGGTATGCACCAAATTGATTTAAGCGATGACGTAAGTTGGCGTCAACACAGTTCGATTGTAGTAGATGCATTCGAGATGAGCGAAGCTTTGAAAGAACACAGCAAGCTAGAAGAGACGTTTGATGATGAAAATAAATCCGATACCGAAGAAGATCCAGCTGAATCTTACACCTGTAAAACCTGTGGGAAGAAGTTTGGGAGTAAGTCGTTACTCAGTAGACATAAATTAACTCACAGAAAAAAGTCATTCACCTGCAATTACTGCCGAAAggtatttctaaataacatgAATTTTGCAAGGCATACTTCTGTGTGTCAACTAGGTTTTCGTCCAAGACGTAAGCCTGGACTTAACTTTACTTGCGAAATCTGCGGGACTACTAAATATTCTAAAAATGCTTTGATTGTCCACATACGTACCCACACTGGTGAAAAACCTTATAAGTGCGACTTGTGTGATAAAGCCTTTAGTCAGACAAGCTCTGTGGCTATACATAAGCAAACGGTACACTCGACTGAGCGATTATTTACTTGCGAATATTGTAGTAAATCGTTCAAAGGAAGAAGCTACCTTTCTGGGCATATTCGAACAGTGCACATGATTGATAAAATTGAGAAGAAATTCAGTTGTAATTATTGTATGAAGAAGTTTTTGGTGCAAAGCCAGTTGAAATACCACTTGAAGTTTCACACGTCGGATAGGCAGTTTAAATGCGATATATGCAGAAGAGCATATGTAAATAAGAGTTCGTTAAAGAAACACAGAGTAACCCATTTTGCTGAGAAGCAACACAAGTGTGAAATTTGTGGTAAAGGTTTCCATCGAAAATACAATGTTAAGGTGCATATTATGAAGAATCATTCTAAGTCTAAGGTTTCATAA
Protein Sequence
MTSICRLCLNSSANHYETIATIEEKYFQLVLPEIDIYLVQTPMFCQSCIESLQTTYSFKSTCMETEKMLKLYALECGEEDLLLSDVLQFQETNQILSGNNYAEGLLTKQIKVECDNDGFGCDSDMSYDTFSCNLCKENFDSDIQLHNHTKEHKKPLKCKICEISFRSNYTLKRHERSHAVTLGNKQLQCNICKVILDDKNKLGDHLKSHFQTYVCTLCDKLYSDEVSICKHLSTIHEIKLDLAEQDLRRRPEIEIILDEVKLKQQLALFESPNDTYKDSSDNEHKKLTEIMDSNTPFQCQDCGNSFCQKKLLIDHIKTHYEQPYCLTCDKAYANYKGLKRHMLHVHKIDISKEHEEQLYTMYPEKEKLDESIQKHLELYKSIIDIEGREISKPDEDQQVRPYKCKICKKTYHVKSSLWDHIRVHFTKSDCKLCRKQFYNILVLKRHLVAVHQIDLGDDITWRDYISVIVEVAEMEEALKEHSKIYEMDDGEHNSDSDEDDLDRQYKCNICKKNFHRNRRLRDHIRLHFTKSNCKLCGKQYYNTSVLKRHLMKIHQIDLGDDITWRDHISIVVNVPAMEQALKEHDKREEMNHGESKSGYDKDPLELVDNAPTGSHSRTFFGKLYPDKSLIFEPENDLQTQPELEIKVEEKLINSDVYEMNVDHEEQQEKIDESMQKHLELHGSMVHVKRREHSDAKSKNVHNRPYKCNMCEKDYLNKRNLANHIRIHFTKSNCNLCGKRFYNVSVLKRHLMKMHQIDLGDDVTWRDHASIVVDVPEMEEALKEHSKPKVIDNDEHKSGSDEDQSGRPYKCKLCKKAYHNKKGLLDHIRNHFTKSDCKLCGNRFYNVPVLKRHLVGMHQIDLSDDVSWRQHSSIVVDAFEMSEALKEHSKLEETFDDENKSDTEEDPAESYTCKTCGKKFGSKSLLSRHKLTHRKKSFTCNYCRKVFLNNMNFARHTSVCQLGFRPRRKPGLNFTCEICGTTKYSKNALIVHIRTHTGEKPYKCDLCDKAFSQTSSVAIHKQTVHSTERLFTCEYCSKSFKGRSYLSGHIRTVHMIDKIEKKFSCNYCMKKFLVQSQLKYHLKFHTSDRQFKCDICRRAYVNKSSLKKHRVTHFAEKQHKCEICGKGFHRKYNVKVHIMKNHSKSKVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00981423;
90% Identity
-
80% Identity
-