Asti028236.1
Basic Information
- Insect
- Aphodius sticticus
- Gene Symbol
- ham
- Assembly
- GCA_963966075.1
- Location
- OZ014510.1:15762484-15787703[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.047 62 5.2 0.0 13 44 135 163 129 163 0.91 2 7 0.08 1.1e+02 4.4 6.9 14 43 195 221 165 222 0.89 3 7 0.5 6.5e+02 1.9 0.2 19 38 229 245 226 250 0.86 4 7 4.1 5.3e+03 -1.0 4.1 4 38 243 273 240 278 0.76 5 7 4.5e-05 0.059 14.8 0.1 17 41 621 642 611 644 0.85 6 7 3.1e-05 0.041 15.3 1.9 17 44 649 673 643 673 0.88 7 7 0.63 8.3e+02 1.5 1.3 14 41 675 699 671 700 0.82
Sequence Information
- Coding Sequence
- ATGCTAACTATAGATATTACGTCAGAATATCGAATTTACGGATCTCTAAGTCTACAAAAGCAAAACATATTTGCAGATCTCATCGATCGAGTGACCGTCCAAGGGTCCAGCGTAAAAGGCTGGCTAGATGGCTCTTTGGACTCCCAGAATTGGCTGAAGCTAATCAGAAGCTCTCACAACAAAACAGCCTGCAACGTCAGACATTTCCTCCAAGGTGGACAGTTGTGGTACGAGGTTTTTGCTGATGTCCCTATTGGGCAGGAACTCATCTTGGAACCAAAGGAACCACTCAATCTTCAGGATATGTTTGGAGATTCCACTTCAGCTGATGACAGATCTGACAGAGAAACAGcaTCTCAGCATTCTGGTACAGTTGATGACGAACGCGAAGACGGCGAAGACGACGATAACGAAATCCGGTGTTCCGTGTGCGACCAACCCTTCTCCGATGTCGATAGGTTGGACGACCACCTAATCACCAAGCACAACTATCGCAGGGACGAGTTCAGGTGTGACCTCTGTCCCAAAGCATACTCTCACAGACCGAATCTGATCAAACATCGCTCAGTTGTTCACGGAGAGCATAGAAAATATCACTGCGAGAACTGCACAAAGGTGTTTACTGACCCTAGTAACTTGCAGAGGCATATTCGGACGAATCACGTCGGTGCCAGAAGCCACGCTTGTCCAGACTGTGGGAAGACGTTTGCCACGTCATCAGGTCTTAAGcaacacacccacatccactcGTCGATAAAACCTTTCCAGTGCGAGGTCTGCTTCAAGGCTTACACACAATTCTCGAATCTCTGCCGTCACAAGCGCATGCACGCCGACTGCCGCATGCAGATCAAATGCGTCAAGTGCGGCCAGTCCTTCTCAACGGTGACCTCTCTATCAAAACATAAACGATTCTGCGACTCCACATCTTCGTCACCGAACCTGGCTGGCCAGCAACTATCCTTGAGTCATATGGGATCGAATAGTCCATTCTCAATGTACCGACCGCCATCGTACCCCATGCACTTCTTCCCACCACACTTTCCACCAGTTCCTCAATTATTCTCCACTGGTCCAACACCACCCTTCATCAACCCCTTGCTCTTCAACCAGTTACCAAAGTTAAAACACGAAGAACACCCTGATGTCAGCCCACCGAAGAGGATGAGGACCATGAGCCCGGAAAGACGTTCGCCTAGTAAGGAGAGGTATACCCCGCCGAGGTTGCCTCAAATCCATTCTAAAGTGAGTCCACCAACCGCCGAAGAGGCTCATTTGGCACCATCACCGGCGAGACCACCAGTGAGTGCTGGATTCTTCAGTAACCCGAGGGATACCATCGCTACGAGTATGAGTAATTCTGAAGACGAAGAAGCTTCTGATTTAACCACCAAAGCATCGCCTATAAGGATCGAGGAGAGTTCGAAGTCGTGTGATGAAGACTCTGAAAAACCGTTAGATCTCAGTTTGGGTAAGAAGGAGGAATCTCCGAAGAAGGAGGAGGACGAGGAGGCTGAAGATGAGAAGATGGAAGATGAGAAGATTGAGATTGTTGACGTTGAAGATAACGAAAAAGATAAGTTGAGTTTTGAGAAGCCATCAACGCCGACGATGGCGTACCCAAGACCTATCCATCCCATGTTTATGGATTTCTACAGGCCCAATTTGGGCTTCCAGAGTCAACCTAATGAGAGACTACTGCCGCATCCGTTTGGGCCAGGACGATTTCCTTTTTTGAATCCTCTCCAACACCAGAGAAGTTACGATCTTTTAAGACCTGGTCTACAAAGTTTTGGGGGTGTGAAACCTTATGATGTAATGCCTCCTCAGCATCAACCACACGGGAAAATCAAAGATAGATACGCTTGTAAGTTCTGTGGGAAAGTGTTCCCTAGGAGTGCAAATCTCACCAGACATTTGAGGACCCATACAGGGGAACAGCCGTATAAGTGTAGGTACTGCGAGAGGTCCTTTAGCATATCCAGTAATCTCCAAAGACACGTCAGGAATATCCATAATaaagagaaaccatttaaatgtccTTTATGTGAGAGATGTTTTGGACAACAGACGAATTTGGATCGCCATCTTAAGAAGCATGAGGCTGATGATGGTACTGGAGGTGTTGTTGTTGCTGATTCTCCTGGTAGTAGTAATGAGAATGAGAGAGAGgatgcgtattttgatgaaataagGAGTTTTATGGGGAAAGTGACTTATTCTGGTGATAGCTTTAACCAAACCAGGTTGTATACCCCACCGAATAATCTAAATCCTTCGAAGGAAGATGATGATTCGGAGGCTTATTCTGAGGAATCTCCACCTGAGGATTACTCAACGAAGATGGATTTTAAGCAGGAAGAGATTATAAACAATAACGACCAAAGTGTTGAGATTTCTACTTAG
- Protein Sequence
- MLTIDITSEYRIYGSLSLQKQNIFADLIDRVTVQGSSVKGWLDGSLDSQNWLKLIRSSHNKTACNVRHFLQGGQLWYEVFADVPIGQELILEPKEPLNLQDMFGDSTSADDRSDRETASQHSGTVDDEREDGEDDDNEIRCSVCDQPFSDVDRLDDHLITKHNYRRDEFRCDLCPKAYSHRPNLIKHRSVVHGEHRKYHCENCTKVFTDPSNLQRHIRTNHVGARSHACPDCGKTFATSSGLKQHTHIHSSIKPFQCEVCFKAYTQFSNLCRHKRMHADCRMQIKCVKCGQSFSTVTSLSKHKRFCDSTSSSPNLAGQQLSLSHMGSNSPFSMYRPPSYPMHFFPPHFPPVPQLFSTGPTPPFINPLLFNQLPKLKHEEHPDVSPPKRMRTMSPERRSPSKERYTPPRLPQIHSKVSPPTAEEAHLAPSPARPPVSAGFFSNPRDTIATSMSNSEDEEASDLTTKASPIRIEESSKSCDEDSEKPLDLSLGKKEESPKKEEDEEAEDEKMEDEKIEIVDVEDNEKDKLSFEKPSTPTMAYPRPIHPMFMDFYRPNLGFQSQPNERLLPHPFGPGRFPFLNPLQHQRSYDLLRPGLQSFGGVKPYDVMPPQHQPHGKIKDRYACKFCGKVFPRSANLTRHLRTHTGEQPYKCRYCERSFSISSNLQRHVRNIHNKEKPFKCPLCERCFGQQTNLDRHLKKHEADDGTGGVVVADSPGSSNENEREDAYFDEIRSFMGKVTYSGDSFNQTRLYTPPNNLNPSKEDDDSEAYSEESPPEDYSTKMDFKQEEIINNNDQSVEIST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00981463;
- 90% Identity
- iTF_00981463;
- 80% Identity
- iTF_00138361;