Asti001003.1
Basic Information
- Insect
- Aphodius sticticus
- Gene Symbol
- snpc-4
- Assembly
- GCA_963966075.1
- Location
- OZ014506.1:1580979-1588101[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 2.4 7.5e+03 -1.4 0.0 22 28 274 280 246 293 0.64 2 5 1.6e-07 0.0005 21.5 0.0 3 43 308 350 306 353 0.89 3 5 9.4e-09 2.9e-05 25.5 0.1 2 45 360 407 359 408 0.95 4 5 5.5e-13 1.7e-09 39.0 0.0 1 46 415 460 415 460 0.97 5 5 6.3e-10 2e-06 29.3 0.0 2 43 468 510 467 513 0.96
Sequence Information
- Coding Sequence
- ATGAATAGCCATATagaagacataaataaattagacGAAATCCTCAAACTAGAGAGCGAATGCAATACGTTCGAGGAAGAAATACAAACTTGTTTGGACTACAATATCAGCGACGAAGAGGAGTTGGACGAATATGACTCTGATTCATCATTCGACTTAGATATATCAGAAGATGCATTAGTTCTATCCGAAAATCGAAATTACAACATCGAAACGATCAACTTTAGCGGAGATTTgcactcaataaaacattatttaacaCCTGAAGAAGTCCGAGCTATTAATTCTTGTAAGGATAGCAAGCTAAAACGTCTACTTTTACTGAACAGAGCGAAGAATATCCATTTGAAAGCCGCGCAACGTAAGCTATACGCTAACCTACGAGAATGCGTGGACGGTATGTTAAAAACACGCAACCAAACGGTGAAAGTGAAATACGATCGATCGAGAAACTGTTCTGGATCGCGTTGTGGGTTCCCATTTTTCACTGCGAAAGGAAGTTTTGGGTGTCCGTTGAATGCTGACGTGTttcgtaaaaaaaaacgtagaGAGGTTTGCCTGGATTATTTACCGATATTGAAAGTGTGGACACTTGAAGATCGTATTAGATTGAGGAGGTctctttgttttaattatacgaATGAACGGATAAAAGAATACGAGAAACAGATTGATTCGTTATTGTGTTTGAAAGTTGATCAAACAGATCAAAAGGAACTGGATAAAATTACGGTTGAAATGGACAAGTGCGAACAGTATATTAAGAAGTGGGGCCAGTCCGAGGTTAGAGATGTACCCCCGTTGAATTACGACGGTTTTGATTGGAAAAATATAGCGGAAACAGAGCTCaaagGTCGGCACTCCGAGTTCGCCTGCAAGGGCATGTGGACGATGGTCATCCACCCTTCCATCAACACATCCGAATGGTCCGACGAAGAAAACGAATCCATACTCCAAATCGCCAAACTGCACCaaaatcagaagtgggatacgaTCGCCTCCGATCTTCACACGAATCGTACCGCCTTCACCGTCTTTTTGCACTTCTTTTCAACACTCAACACCAAATACAGCCAAGAGAGATTTACGAAGGAAGAAGACCAATACCTCCAAGAAGTCGTAGATCTATGCCGCGTCGGAAATTACATTCCCTGGACGAAAGTGGCGCAGCATTTCGACAGACGGTCTCGGAATCAGTTGTACGCCAGGTACAATTGTCACTTGAATTTGTCTTTTTATAAGAAGGGTACGTTTTCGGAAGAGGAGGATGTTTTGTTGCTGGTTTTGATACGGAGATTTGGGACGAAGTTTGCACATATCTGTGATTATTTGCCGTATAGATCGAGATTGCAGATTCGGAATCGGTGCAGGAATAATCTGCTGTACGAGGAGTTGAAGCAAGGAGCGTGGACTGAGAGTGATGATTTGTTTATTGTGAGGCACGTGGATGAGAATGGGCCGAAGGATTGGAGTAAGTTGATAGAGAAAATGCCGTTCAGGAATACTGGACAGATCAGGCACAGATACCGCTTCATGCAAATGTGGCTATCGAAAAACCCCGAAAAGAAGCTACCGGACGTCCCTCGTAAAGTAGGCTCCACCAAATACGACTGCAACCTTCCGATGCTCAGAAAATTCGCCGACATGTTCGACGATGACGCCGACATACCCACCTTAGACGAGGTCCggcaaaaactaaaaaagtgCGGTTATAAACGCTCTCATCGAACGTCCAGCCAATACGTCAACACCTCGGTTGACGAAGAACTCATCCAACACTTCCAGAGCAGCCACAAACTACGAACGGCCAAAGTCATAACGAAATCGGACTTCGAAACCGCAACGAAAACGGTAAAGGCGTTATTGGCGTTATTGAAGGTTACGTTGAGCGTTCCCGCTAAAGAAACGTTGGATTCGAATGGTGCGTTAGATGGAGTCGATAAGGAGATTTTAGGGCATGTTTTTCATAACGCGTACACGCAATACGATAGTTTGAATCAAGCTAGTACGTCGCAAGGTAATGCAtcggaaaaaattttaaaaatcgattataaaaTGGGCGATGGTTCGATTTCGTTAATTCCACCAAACGTAAACACTCTAATCGGAATGAGGAGCATGTTAATTAAATATAGCGCGTTTAAATCGAAAATAAACAAGACCGATTCGTATACGAAGGCTAAAAACGTAATAAACGAAAAAATTTCCGACGACTTATCGAACTTACCCTTCGGTTTACGAAATCTCATAACATCGGAGAGAAACGACTTTAAAGATCGGTTAAAAACCCTGTTTAAGTGGCCTGCGATTATGTCGGTCGTTGAACCGCAACGGTATTTAACGATACTGGACGTTCCGACGACTATTAAAAACGCTGCGAAGAAGAGTGTCGGAACGCGGGGGCGTCCAAAAAAGGATTTTACAAAGATCGTTTTGATGAATAAAAGTCGACTGGAGAAACGAATGGTTGCTAAAGCGACGGAAGACGTTGAGAAGAATATTGAATTTGTCGATGTTAATCCGTGTAAGAAGATTAAGTTGTTGAAGGAAGAGGAAGATATTGAGAGTGGTGGGAGTGATATTGTCGATTTAGAGGACGATATTAGGAAACTGGATGGGATACTTCGGTCGGAAACTTTAGAATAA
- Protein Sequence
- MNSHIEDINKLDEILKLESECNTFEEEIQTCLDYNISDEEELDEYDSDSSFDLDISEDALVLSENRNYNIETINFSGDLHSIKHYLTPEEVRAINSCKDSKLKRLLLLNRAKNIHLKAAQRKLYANLRECVDGMLKTRNQTVKVKYDRSRNCSGSRCGFPFFTAKGSFGCPLNADVFRKKKRREVCLDYLPILKVWTLEDRIRLRRSLCFNYTNERIKEYEKQIDSLLCLKVDQTDQKELDKITVEMDKCEQYIKKWGQSEVRDVPPLNYDGFDWKNIAETELKGRHSEFACKGMWTMVIHPSINTSEWSDEENESILQIAKLHQNQKWDTIASDLHTNRTAFTVFLHFFSTLNTKYSQERFTKEEDQYLQEVVDLCRVGNYIPWTKVAQHFDRRSRNQLYARYNCHLNLSFYKKGTFSEEEDVLLLVLIRRFGTKFAHICDYLPYRSRLQIRNRCRNNLLYEELKQGAWTESDDLFIVRHVDENGPKDWSKLIEKMPFRNTGQIRHRYRFMQMWLSKNPEKKLPDVPRKVGSTKYDCNLPMLRKFADMFDDDADIPTLDEVRQKLKKCGYKRSHRTSSQYVNTSVDEELIQHFQSSHKLRTAKVITKSDFETATKTVKALLALLKVTLSVPAKETLDSNGALDGVDKEILGHVFHNAYTQYDSLNQASTSQGNASEKILKIDYKMGDGSISLIPPNVNTLIGMRSMLIKYSAFKSKINKTDSYTKAKNVINEKISDDLSNLPFGLRNLITSERNDFKDRLKTLFKWPAIMSVVEPQRYLTILDVPTTIKNAAKKSVGTRGRPKKDFTKIVLMNKSRLEKRMVAKATEDVEKNIEFVDVNPCKKIKLLKEEEDIESGGSDIVDLEDDIRKLDGILRSETLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980939;
- 90% Identity
- -
- 80% Identity
- -