Asti024194.1
Basic Information
- Insect
- Aphodius sticticus
- Gene Symbol
- clz9
- Assembly
- GCA_963966075.1
- Location
- OZ014509.1:35636197-35639847[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-08 2.3e-05 25.4 0.0 4 38 26 61 26 66 0.89
Sequence Information
- Coding Sequence
- ATGCAGAGGGTACCAAGAAAAGACTTACGCGATGCTATTGAAAGAAGTTCACAAATCCATTTGGAACATGCGCTGAACATGAAAAATGCCATCGAGAAAGTTATATGTAACGAACTAACTTTAAGAAAAGCTGCCAACAAATTTAATGTTAGCAAGACAGCACTTCATCGCAAGGTTAAAAAGTTTAATGACCATAAAGGAGACGAACCGTTTGACTTTACGCGAAAACATGgttttaaaaacgtttttacGTACGAAGAAGAAAACCTTCTAGAGCAATATATTATTCAAGCGTCCAAAATGTGTTATGGCCTGACACTTAAAATGACTCAAGAACTTGCTTATAGGTACGCCATTGCCAACAATAAAACTTGTCCGTCATCATGGACGGAAAGACAATGCGCGGGCATAGAATGGGTATATTTATTTCGTCAAAGGCACCCTTGTATAAGTTTAAGAACACCAGAAGCAACTAGTCTTAGTCGTGCTACAagctttaataaatttaatgtaaaaCTATTTTACGACAATTTAAAGAAAGTTTTGCAAGATGACAATTTTGAAGCTCATCAAATTTTTAATTGCGACGAAACCAGCGTCACCACTGTGCACAAGCCGCCAAAGATATTAGCATCCAGAAAAGACAAGCAGATAGGTAAAATAACAAGTGCTGAGAGGGGAACCCTTGTTACTATGTGCGGAACAATATGTGCAAACGGTACATCGATACCACCGTTCTTCATTTTTCCAAGGAAAAATTTCAAGCCTCATATGCTAGAAGGTGCTCCACCTGATGCGTCTGGAGCTGCACATCCTAGTGGTTGGATGACTGGTGTAAATTTTACCGAATTCATAAAACACCTCATTAAACATGTTCGCTGcacaacagaaaataaaatattattggtgATGGATAACCACGAGAGCCACTACGACATAAATGTTTTACAGATATGCAAAGACAATGGTATTGTTTTGCTGACACTTCCACCACACTGTAGCCATAAATTGCAACCCCTGGATGTTTCATGTTACGGACCATTCAAAACATATTATAATAGATGCATGGATGAGTGGATGTTGAACCATCCTGGACAACCTATAACTATTTATAGCATTGCAGGGATCGTGGGTAAAGCATATCCTCTGGCATTTACACCAATGAATATCAACAAAGGTTTTCAACGATCCGGCATTTATCCATATAATTCAGATATCATAGAATCGACAGAATATTTAAGTTCATATGTGACCGATAGAAATCTTTCTACTGCCAGTACCTCCCAGCTTAACCCTACTCAAGACTACAGAGCAGAGCAAACAGTCGATATACCATCAACATCGCTACAAGCAACTTTAGTTTCACCTGAACAAGTTCGACCTCATTTAAAAGCGCCTCCCCGAAAAACTACAACCACCAGAAAGCGCGCTAAATCAACAATTTTAACACTAACACCTAATAAGGAAGAAATTGAACAAGCACATGCCAAGAGAATAGGGAAATTAAAGGGAAACGACCAAAAAGAAaggaatgtaaaaaaaatcaaaaggaaAGTGTTTGAGGAGAGTAGCACTGAAAGTGAAATAGAATGCCGAATGTCTGGAAGTGATGCGTCAGAATACGTGGATGAACAAATAAGCGAAGGTGAATACAGCCGTAGTTACCGGAGACTACGTTCTTGTCAaatttcctacaaaaaaaactattccTATCTAAAAAAGAGCATGGGATTGTTATTTGAATTCCCCGAGAAAGCTGACAAGGATATAATAGGAATAGATgatattgtcataaaattgcctAAACCAATTATTTGTGGGGGCACTGCAAGAACCTCAAAAAAACTAAGCTTCAATATTGACTTTGGTACCATCAGGAGACCTGACGGTAAATTCACAGAAACAGGAAGGGAAACAGCAGAGTTACTCATGCAAACCCATTTTCCAAAGTCTGTTGTAATATCCACAGAAGAGTCAAACACACTCCCTGACCACACAAATCCTGGAAAGGGAGTGGTACAGGGTAACAACTCAAACACAACCGACAAAGCCAAGAGGATCTTAATGACAACCAAGCCAGGCACTCTGAAAGACATGTGGCTCAAACCAGAGATGATGCTATGGCTCTACAACTTGGTAGTAAAACCCATGATCATCTACGGACGCACGGTGGTGGCCAAAAGTAGAACAGAATGCTACCCGGACAGCTCTCTCGAGAGTATAGCGGCTAGCTTGCCTATGCATAACTAG
- Protein Sequence
- MQRVPRKDLRDAIERSSQIHLEHALNMKNAIEKVICNELTLRKAANKFNVSKTALHRKVKKFNDHKGDEPFDFTRKHGFKNVFTYEEENLLEQYIIQASKMCYGLTLKMTQELAYRYAIANNKTCPSSWTERQCAGIEWVYLFRQRHPCISLRTPEATSLSRATSFNKFNVKLFYDNLKKVLQDDNFEAHQIFNCDETSVTTVHKPPKILASRKDKQIGKITSAERGTLVTMCGTICANGTSIPPFFIFPRKNFKPHMLEGAPPDASGAAHPSGWMTGVNFTEFIKHLIKHVRCTTENKILLVMDNHESHYDINVLQICKDNGIVLLTLPPHCSHKLQPLDVSCYGPFKTYYNRCMDEWMLNHPGQPITIYSIAGIVGKAYPLAFTPMNINKGFQRSGIYPYNSDIIESTEYLSSYVTDRNLSTASTSQLNPTQDYRAEQTVDIPSTSLQATLVSPEQVRPHLKAPPRKTTTTRKRAKSTILTLTPNKEEIEQAHAKRIGKLKGNDQKERNVKKIKRKVFEESSTESEIECRMSGSDASEYVDEQISEGEYSRSYRRLRSCQISYKKNYSYLKKSMGLLFEFPEKADKDIIGIDDIVIKLPKPIICGGTARTSKKLSFNIDFGTIRRPDGKFTETGRETAELLMQTHFPKSVVISTEESNTLPDHTNPGKGVVQGNNSNTTDKAKRILMTTKPGTLKDMWLKPEMMLWLYNLVVKPMIIYGRTVVAKSRTECYPDSSLESIAASLPMHN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00980926;
- 90% Identity
- iTF_00137858; iTF_00137856; iTF_00137857;
- 80% Identity
- -