Asti003193.1
Basic Information
- Insect
- Aphodius sticticus
- Gene Symbol
- bab2
- Assembly
- GCA_963966075.1
- Location
- OZ014506.1:43970441-43984295[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.1e-17 3.3e-14 53.7 0.0 2 45 371 415 370 415 0.96
Sequence Information
- Coding Sequence
- ATGACGATGCAACAGTACTGTCTCAAATGGAACAACCATCAACCGAATTTCATCTCAGTTTTCTCTAGTCTACTGAATAGTGAATCGCTGGTCGATGTCACGTTATCAGCGGAAGGCAGGCATGTCCAAGCGCACAAACTCGTGCTATCCGCTTGTAGCTCCTATTTTCAAtctCTCTTCACGATAAACCCGTGCCAGCATCCTATTGTCATCTTGAAAGATGTCAAATTTACCGATTTGAAGGTTATGGTTGATTTCATGTATTATGGCGAGGTAAACGTGTCGCAGGAACAATTGCCACATATATTGAAGACTGccgaaatgttgaaaattaaagGTTTGGCTGAGGTACCTGTGGAGTCTTCAATATCCCGACACAGTAATTCATTGGAACGCACAGAGATGCACTCGGCAAATGAAGGTGGTTGGACCACAGAAAGCCAGCGACAATCTATGACACCTTCGCCTTGCCCGTTGTCCCCTGGATCCAGACGGAAACGATTGAGGAAATCATCAACCGGTTCAGGCTCTGGATCGACGGAACGAACCGCCGAGGAGCATGCCGCCGCTGAGGCCCTGGCTGCGTCAAGCAACTCTACCCTCGGAACAGTGATAAAACCAGATCCTGGGGGATTTGCCTCTGAACCAAACGTCCAACGCGGTGCTAAGCAACATAGCAGTGACTCTGACGTGCAGAGGAACAGCTCACACGATAGCGAGAGCGACACAACACATCAAATCACCCTGcaaatACCGCAACAGCAAGACATCAATATACCGCACAGCATTGAATCTTCAGCATCTCTTGATGGCCCAGGTCCATCGTCGTCAACTTCGCAGACTGTCTCTGGTTTCCAGTGGGGCGTCATCGACCACGGCTACCCCCCCGGACACTACTCACCTTGCCATTTGCCGATTTCAACACACAATGAAATCCAGTACACTTCTTTGAACACGACAACAGCTTCAGGCCACGCCAATGTTCACAACCAAAATTTGCCGCAGGACCAGATGCAATACATGCACCAGATCGATCAGAAACCTCCGCAACAGATTACAAACTCCCCGGCACAGATCATGAAGCGCAAGCGTAGCTTGAATCCGCAAGCGGACGAAAACTTTATCCGTGCGTTGGAAGCTGTCCGTTCTGGTGGTATAGGCTTCTGCAAGGCTGCTAGGATGTTTGGTGTCAACAATCGCACCCTTTGGTTGGAGTACAAGAAGCGCGGCTACCCGATAAGCAGATtatcaataaaaagtcgaaaaccaGAAAACACGGAAAATAGTCAGGTGCAAACGACCAGTCAACCACCGAATGGTCAGGCGCAGAATCAGCACCCTCCAGTGACCGCTGCTCAGCCCGTTCGAACGCAGCACGAGCCGACGGAGGTGGTTATCAGCAATCCGATAGCTATGATCAGTAGTGCATTTTTGGATGGCCGTACTGTCGAATTATCACCTGTATTCCAGAGGTCGCGGTATTTTGACGCAAGCGCTGTGAACGGGCAGAATATGAATATGCAGAATATGAATTTTGAGAAACGTCCCACGATAACAACACACGCACAGCTGTCGCAGCAATCTCTGCATCAGAACCAGCTGGGCACAAAGCGCAGCAGATTCTTGATGCGGCAACCGAGGATAAAACGAGAGAGTGATCCGAGCCAGAACCCTGACGGAGACCCGCTGTCTCCGCAGCTGCTCTCTGTTCCACACGTCCGCATTGAAAGGCAGTGTTCCGATCCACTTCCGGCCCATTCGCCCCCTCCAGGGCATTTACTATCCGTTCCAGGAAACGTCTTGGTGAAACAGCACTCACATCCCCTATTACCTAGTCAACTTCATCagCATCAGCCTGTGACACCTCCGCAACCGATATATGAGAGGTCGGTGAGTCCGATCATCATCTATTCGGATCCACTGTCTACCTCTCCAAGGGACACGCCCCCTAGGTCAGAAAGTTTTCCGTCAGAGACCATGGCTACGTTACGGGTACGATCAGACGAACTGCGGAGGAGTGCCTCTTCACCCCAGGTTATTTCTCAACAGGACTAA
- Protein Sequence
- MTMQQYCLKWNNHQPNFISVFSSLLNSESLVDVTLSAEGRHVQAHKLVLSACSSYFQSLFTINPCQHPIVILKDVKFTDLKVMVDFMYYGEVNVSQEQLPHILKTAEMLKIKGLAEVPVESSISRHSNSLERTEMHSANEGGWTTESQRQSMTPSPCPLSPGSRRKRLRKSSTGSGSGSTERTAEEHAAAEALAASSNSTLGTVIKPDPGGFASEPNVQRGAKQHSSDSDVQRNSSHDSESDTTHQITLQIPQQQDINIPHSIESSASLDGPGPSSSTSQTVSGFQWGVIDHGYPPGHYSPCHLPISTHNEIQYTSLNTTTASGHANVHNQNLPQDQMQYMHQIDQKPPQQITNSPAQIMKRKRSLNPQADENFIRALEAVRSGGIGFCKAARMFGVNNRTLWLEYKKRGYPISRLSIKSRKPENTENSQVQTTSQPPNGQAQNQHPPVTAAQPVRTQHEPTEVVISNPIAMISSAFLDGRTVELSPVFQRSRYFDASAVNGQNMNMQNMNFEKRPTITTHAQLSQQSLHQNQLGTKRSRFLMRQPRIKRESDPSQNPDGDPLSPQLLSVPHVRIERQCSDPLPAHSPPPGHLLSVPGNVLVKQHSHPLLPSQLHQHQPVTPPQPIYERSVSPIIIYSDPLSTSPRDTPPRSESFPSETMATLRVRSDELRRSASSPQVISQQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00138195;
- 90% Identity
- iTF_00138195;
- 80% Identity
- iTF_00138195;